RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
CDK12-208ENST00000584336 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
CDK12-208ENST00000584336 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
CDK12-208ENST00000584336 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
CDK12-208ENST00000584336 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
CDK12-208ENST00000584336 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
CDK12-208ENST00000584336 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
CDK12-208ENST00000584336 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
CDK12-208ENST00000584336 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
CDK12-208ENST00000584336 FBLN2P98095 1184 aa16.17■□□□□ 0.18
CDK12-208ENST00000584336 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
CDK12-208ENST00000584336 APLP2Q06481 763 aa16.14■□□□□ 0.17
CDK12-208ENST00000584336 CHD1O14646 1710 aa16.13■□□□□ 0.17
CDK12-208ENST00000584336 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
CDK12-208ENST00000584336 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
CDK12-208ENST00000584336 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
CDK12-208ENST00000584336 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
CDK12-208ENST00000584336 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
CDK12-208ENST00000584336 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
CDK12-208ENST00000584336 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
CDK12-208ENST00000584336 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
CDK12-208ENST00000584336 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
CDK12-208ENST00000584336 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
CDK12-208ENST00000584336 TIAM1Q13009 1591 aa16.01■□□□□ 0.15
CDK12-208ENST00000584336 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
CDK12-208ENST00000584336 HRCP23327 699 aa16■□□□□ 0.15
CDK12-208ENST00000584336 NUP160Q12769 1436 aa15.99■□□□□ 0.15
CDK12-208ENST00000584336 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
CDK12-208ENST00000584336 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
CDK12-208ENST00000584336 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
CDK12-208ENST00000584336 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
CDK12-208ENST00000584336 LRRIQ1Q96JM4 1722 aa15.98■□□□□ 0.15
CDK12-208ENST00000584336 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
CDK12-208ENST00000584336 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.15
CDK12-208ENST00000584336 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
CDK12-208ENST00000584336 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
CDK12-208ENST00000584336 KIAA0556O60303 1618 aa15.95■□□□□ 0.14
CDK12-208ENST00000584336 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
CDK12-208ENST00000584336 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
CDK12-208ENST00000584336 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
CDK12-208ENST00000584336 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
CDK12-208ENST00000584336 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
CDK12-208ENST00000584336 CFAP43Q8NDM7 1665 aa15.93■□□□□ 0.14
CDK12-208ENST00000584336 MAP3K1Q13233 1512 aa15.93■□□□□ 0.14
CDK12-208ENST00000584336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
CDK12-208ENST00000584336 PHLDB1Q86UU1 1377 aa15.89■□□□□ 0.13
CDK12-208ENST00000584336 MAGI3Q5TCQ9 1506 aa15.86■□□□□ 0.13
CDK12-208ENST00000584336 CDK13Q14004 1512 aaKnown RBP15.86■□□□□ 0.13
CDK12-208ENST00000584336 RRBP1Q9P2E9 1410 aaKnown RBP15.84■□□□□ 0.13
CDK12-208ENST00000584336 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.12
CDK12-208ENST00000584336 PRG4Q92954 1404 aaPredicted RBP15.83■□□□□ 0.12
CDK12-208ENST00000584336 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.12
CDK12-208ENST00000584336 ITGAEP38570 1179 aa15.82■□□□□ 0.12
CDK12-208ENST00000584336 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
CDK12-208ENST00000584336 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
CDK12-208ENST00000584336 SHROOM2Q13796 1616 aa15.81■□□□□ 0.12
CDK12-208ENST00000584336 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
CDK12-208ENST00000584336 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
CDK12-208ENST00000584336 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
CDK12-208ENST00000584336 CARMIL2Q6F5E8 1435 aa15.8■□□□□ 0.12
CDK12-208ENST00000584336 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
CDK12-208ENST00000584336 RAPGEF6Q8TEU7 1601 aa15.8■□□□□ 0.12
CDK12-208ENST00000584336 CCDC18Q5T9S5 1454 aa15.76■□□□□ 0.11
CDK12-208ENST00000584336 FAM50AQ14320 339 aaKnown RBP15.76■□□□□ 0.11
CDK12-208ENST00000584336 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
CDK12-208ENST00000584336 NCOA2Q15596 1464 aa15.75■□□□□ 0.11
CDK12-208ENST00000584336 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
CDK12-208ENST00000584336 ABCA8O94911 1581 aa15.71■□□□□ 0.11
CDK12-208ENST00000584336 PTPRGP23470 1445 aa15.71■□□□□ 0.11
CDK12-208ENST00000584336 SUPT6HQ7KZ85 1726 aaKnown RBP15.7■□□□□ 0.1
CDK12-208ENST00000584336 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
CDK12-208ENST00000584336 ATP10BO94823 1461 aa15.66■□□□□ 0.1
CDK12-208ENST00000584336 MYOM3Q5VTT5 1437 aa15.66■□□□□ 0.1
CDK12-208ENST00000584336 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
CDK12-208ENST00000584336 KIF14Q15058 1648 aa15.62■□□□□ 0.09
CDK12-208ENST00000584336 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
CDK12-208ENST00000584336 TROQ12816 1431 aaPredicted RBP15.61■□□□□ 0.09
CDK12-208ENST00000584336 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
CDK12-208ENST00000584336 PTPN23Q9H3S7 1636 aa15.6■□□□□ 0.09
CDK12-208ENST00000584336 ZNF644Q9H582 1327 aaPredicted RBP15.59■□□□□ 0.09
CDK12-208ENST00000584336 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
CDK12-208ENST00000584336 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
CDK12-208ENST00000584336 PLEKHD1A6NEE1 506 aa15.56■□□□□ 0.08
CDK12-208ENST00000584336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.08
CDK12-208ENST00000584336 DHX57Q6P158 1386 aaKnown RBP15.55■□□□□ 0.08
CDK12-208ENST00000584336 TCOF1Q13428 1488 aaKnown RBP15.55■□□□□ 0.08
CDK12-208ENST00000584336 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
CDK12-208ENST00000584336 SETD5Q9C0A6 1442 aa15.54■□□□□ 0.08
CDK12-208ENST00000584336 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
CDK12-208ENST00000584336 ADCY10Q96PN6 1610 aa15.52■□□□□ 0.08
CDK12-208ENST00000584336 GPATCH8Q9UKJ3 1502 aaKnown RBP15.52■□□□□ 0.07
CDK12-208ENST00000584336 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
CDK12-208ENST00000584336 ABCC10Q5T3U5 1492 aa15.51■□□□□ 0.07
CDK12-208ENST00000584336 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
CDK12-208ENST00000584336 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
CDK12-208ENST00000584336 KCNH8Q96L42 1107 aa15.48■□□□□ 0.07
CDK12-208ENST00000584336 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
CDK12-208ENST00000584336 ZCCHC11Q5TAX3 1644 aaKnown RBP15.47■□□□□ 0.07
CDK12-208ENST00000584336 CDC42BPAQ5VT25 1732 aa15.46■□□□□ 0.06
CDK12-208ENST00000584336 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms