RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
CDK5RAP3-218ENST00000580391 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
CDK5RAP3-218ENST00000580391 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
CDK5RAP3-218ENST00000580391 EFCAB5A4FU69 1503 aa23.15■■□□□ 1.3
CDK5RAP3-218ENST00000580391 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
CDK5RAP3-218ENST00000580391 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
CDK5RAP3-218ENST00000580391 SAMD9Q5K651 1589 aa23.1■■□□□ 1.29
CDK5RAP3-218ENST00000580391 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
CDK5RAP3-218ENST00000580391 IQGAP2Q13576 1575 aa23.08■■□□□ 1.29
CDK5RAP3-218ENST00000580391 FHOD3Q2V2M9 1422 aa23.08■■□□□ 1.28
CDK5RAP3-218ENST00000580391 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
CDK5RAP3-218ENST00000580391 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
CDK5RAP3-218ENST00000580391 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
CDK5RAP3-218ENST00000580391 APLP2Q06481 763 aa23.01■■□□□ 1.27
CDK5RAP3-218ENST00000580391 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
CDK5RAP3-218ENST00000580391 KIAA0586Q9BVV6 1533 aa22.95■■□□□ 1.26
CDK5RAP3-218ENST00000580391 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
CDK5RAP3-218ENST00000580391 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
CDK5RAP3-218ENST00000580391 UGGT2Q9NYU1 1516 aa22.93■■□□□ 1.26
CDK5RAP3-218ENST00000580391 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
CDK5RAP3-218ENST00000580391 CHD1O14646 1710 aa22.91■■□□□ 1.26
CDK5RAP3-218ENST00000580391 FYCO1Q9BQS8 1478 aa22.91■■□□□ 1.26
CDK5RAP3-218ENST00000580391 FMN1Q68DA7 1419 aa22.9■■□□□ 1.26
CDK5RAP3-218ENST00000580391 FBLN2P98095 1184 aa22.89■■□□□ 1.26
CDK5RAP3-218ENST00000580391 NUP160Q12769 1436 aa22.89■■□□□ 1.26
CDK5RAP3-218ENST00000580391 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
CDK5RAP3-218ENST00000580391 CASKIN1Q8WXD9 1431 aa22.88■■□□□ 1.25
CDK5RAP3-218ENST00000580391 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
CDK5RAP3-218ENST00000580391 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
CDK5RAP3-218ENST00000580391 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
CDK5RAP3-218ENST00000580391 DISP1Q96F81 1524 aa22.83■■□□□ 1.25
CDK5RAP3-218ENST00000580391 LRRC9Q6ZRR7 1453 aa22.78■■□□□ 1.24
CDK5RAP3-218ENST00000580391 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
CDK5RAP3-218ENST00000580391 HECW1Q76N89 1606 aa22.74■■□□□ 1.23
CDK5RAP3-218ENST00000580391 HRCP23327 699 aa22.7■■□□□ 1.22
CDK5RAP3-218ENST00000580391 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
CDK5RAP3-218ENST00000580391 RAPGEF6Q8TEU7 1601 aa22.65■■□□□ 1.22
CDK5RAP3-218ENST00000580391 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
CDK5RAP3-218ENST00000580391 RRBP1Q9P2E9 1410 aaKnown RBP22.64■■□□□ 1.22
CDK5RAP3-218ENST00000580391 CARMIL2Q6F5E8 1435 aa22.63■■□□□ 1.21
CDK5RAP3-218ENST00000580391 SHROOM2Q13796 1616 aa22.62■■□□□ 1.21
CDK5RAP3-218ENST00000580391 EPRSP07814 1512 aaKnown RBP22.62■■□□□ 1.21
CDK5RAP3-218ENST00000580391 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
CDK5RAP3-218ENST00000580391 MAGI3Q5TCQ9 1506 aa22.6■■□□□ 1.21
CDK5RAP3-218ENST00000580391 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
CDK5RAP3-218ENST00000580391 PHLDB1Q86UU1 1377 aa22.59■■□□□ 1.21
CDK5RAP3-218ENST00000580391 MTUS2Q5JR59 1369 aa22.57■■□□□ 1.2
CDK5RAP3-218ENST00000580391 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
CDK5RAP3-218ENST00000580391 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
CDK5RAP3-218ENST00000580391 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
CDK5RAP3-218ENST00000580391 PRG4Q92954 1404 aaPredicted RBP22.56■■□□□ 1.2
CDK5RAP3-218ENST00000580391 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
CDK5RAP3-218ENST00000580391 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-218ENST00000580391 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
CDK5RAP3-218ENST00000580391 ARID3CA6NKF2 412 aa22.5■■□□□ 1.19
CDK5RAP3-218ENST00000580391 ABCA8O94911 1581 aa22.5■■□□□ 1.19
CDK5RAP3-218ENST00000580391 ERCC6L2Q5T890 1561 aa22.49■■□□□ 1.19
CDK5RAP3-218ENST00000580391 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
CDK5RAP3-218ENST00000580391 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
CDK5RAP3-218ENST00000580391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
CDK5RAP3-218ENST00000580391 FGD6Q6ZV73 1430 aa22.41■■□□□ 1.18
CDK5RAP3-218ENST00000580391 PTPRGP23470 1445 aa22.39■■□□□ 1.18
CDK5RAP3-218ENST00000580391 MYOM3Q5VTT5 1437 aa22.39■■□□□ 1.17
CDK5RAP3-218ENST00000580391 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
CDK5RAP3-218ENST00000580391 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
CDK5RAP3-218ENST00000580391 ITGAEP38570 1179 aa22.34■■□□□ 1.17
CDK5RAP3-218ENST00000580391 ADCY10Q96PN6 1610 aa22.34■■□□□ 1.17
CDK5RAP3-218ENST00000580391 PTPN23Q9H3S7 1636 aa22.34■■□□□ 1.17
CDK5RAP3-218ENST00000580391 TROQ12816 1431 aaPredicted RBP22.32■■□□□ 1.16
CDK5RAP3-218ENST00000580391 KIF14Q15058 1648 aa22.32■■□□□ 1.16
CDK5RAP3-218ENST00000580391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.32■■□□□ 1.16
CDK5RAP3-218ENST00000580391 ATP10BO94823 1461 aa22.32■■□□□ 1.16
CDK5RAP3-218ENST00000580391 ZEB1P37275 1124 aaPredicted RBP22.3■■□□□ 1.16
CDK5RAP3-218ENST00000580391 UACAQ9BZF9 1416 aa22.29■■□□□ 1.16
CDK5RAP3-218ENST00000580391 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-218ENST00000580391 ABCC2Q92887 1545 aa22.28■■□□□ 1.16
CDK5RAP3-218ENST00000580391 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP3-218ENST00000580391 ITSN2Q9NZM3 1697 aa22.24■■□□□ 1.15
CDK5RAP3-218ENST00000580391 MIA2Q96PC5 1412 aa22.22■■□□□ 1.15
CDK5RAP3-218ENST00000580391 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
CDK5RAP3-218ENST00000580391 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
CDK5RAP3-218ENST00000580391 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
CDK5RAP3-218ENST00000580391 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
CDK5RAP3-218ENST00000580391 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
CDK5RAP3-218ENST00000580391 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
CDK5RAP3-218ENST00000580391 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
CDK5RAP3-218ENST00000580391 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
CDK5RAP3-218ENST00000580391 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.13
CDK5RAP3-218ENST00000580391 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
CDK5RAP3-218ENST00000580391 DHX57Q6P158 1386 aaKnown RBP22.13■■□□□ 1.13
CDK5RAP3-218ENST00000580391 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
CDK5RAP3-218ENST00000580391 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
CDK5RAP3-218ENST00000580391 CAMSAP2Q08AD1 1489 aa22.09■■□□□ 1.13
CDK5RAP3-218ENST00000580391 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
CDK5RAP3-218ENST00000580391 TTC37Q6PGP7 1564 aa22.07■■□□□ 1.12
CDK5RAP3-218ENST00000580391 HFM1A2PYH4 1435 aa22.06■■□□□ 1.12
CDK5RAP3-218ENST00000580391 PREX2Q70Z35 1606 aa22.06■■□□□ 1.12
CDK5RAP3-218ENST00000580391 CDC42BPBQ9Y5S2 1711 aa22.05■■□□□ 1.12
CDK5RAP3-218ENST00000580391 ZNF644Q9H582 1327 aaPredicted RBP22.05■■□□□ 1.12
CDK5RAP3-218ENST00000580391 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms