RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
CDK5RAP3-217ENST00000580287 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
CDK5RAP3-217ENST00000580287 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-217ENST00000580287 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
CDK5RAP3-217ENST00000580287 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
CDK5RAP3-217ENST00000580287 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
CDK5RAP3-217ENST00000580287 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
CDK5RAP3-217ENST00000580287 MAGI1Q96QZ7 1491 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-217ENST00000580287 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
CDK5RAP3-217ENST00000580287 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
CDK5RAP3-217ENST00000580287 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
CDK5RAP3-217ENST00000580287 FHOD3Q2V2M9 1422 aa19.72■□□□□ 0.75
CDK5RAP3-217ENST00000580287 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP3-217ENST00000580287 CTTNBP2Q8WZ74 1663 aa19.68■□□□□ 0.74
CDK5RAP3-217ENST00000580287 APLP2Q06481 763 aa19.64■□□□□ 0.73
CDK5RAP3-217ENST00000580287 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
CDK5RAP3-217ENST00000580287 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
CDK5RAP3-217ENST00000580287 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
CDK5RAP3-217ENST00000580287 KANK4Q5T7N3 995 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-217ENST00000580287 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
CDK5RAP3-217ENST00000580287 NUP160Q12769 1436 aa19.58■□□□□ 0.73
CDK5RAP3-217ENST00000580287 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
CDK5RAP3-217ENST00000580287 EFCAB5A4FU69 1503 aa19.55■□□□□ 0.72
CDK5RAP3-217ENST00000580287 SAMD9Q5K651 1589 aa19.53■□□□□ 0.72
CDK5RAP3-217ENST00000580287 CHD1O14646 1710 aa19.52■□□□□ 0.72
CDK5RAP3-217ENST00000580287 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
CDK5RAP3-217ENST00000580287 UGGT2Q9NYU1 1516 aa19.5■□□□□ 0.71
CDK5RAP3-217ENST00000580287 PCF11O94913 1555 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-217ENST00000580287 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
CDK5RAP3-217ENST00000580287 CASKIN1Q8WXD9 1431 aa19.43■□□□□ 0.7
CDK5RAP3-217ENST00000580287 PRG4Q92954 1404 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-217ENST00000580287 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
CDK5RAP3-217ENST00000580287 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
CDK5RAP3-217ENST00000580287 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
CDK5RAP3-217ENST00000580287 TIAM1Q13009 1591 aa19.35■□□□□ 0.69
CDK5RAP3-217ENST00000580287 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
CDK5RAP3-217ENST00000580287 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
CDK5RAP3-217ENST00000580287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP3-217ENST00000580287 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-217ENST00000580287 OSCARQ8IYS5 282 aa19.33■□□□□ 0.69
CDK5RAP3-217ENST00000580287 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
CDK5RAP3-217ENST00000580287 CDK13Q14004 1512 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-217ENST00000580287 PTPRGP23470 1445 aa19.29■□□□□ 0.68
CDK5RAP3-217ENST00000580287 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
CDK5RAP3-217ENST00000580287 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
CDK5RAP3-217ENST00000580287 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.67
CDK5RAP3-217ENST00000580287 MAP3K1Q13233 1512 aa19.26■□□□□ 0.67
CDK5RAP3-217ENST00000580287 NUP153P49790 1475 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-217ENST00000580287 EPRSP07814 1512 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-217ENST00000580287 PHLDB1Q86UU1 1377 aa19.24■□□□□ 0.67
CDK5RAP3-217ENST00000580287 SHROOM2Q13796 1616 aa19.23■□□□□ 0.67
CDK5RAP3-217ENST00000580287 MAGI3Q5TCQ9 1506 aa19.22■□□□□ 0.67
CDK5RAP3-217ENST00000580287 CFAP43Q8NDM7 1665 aa19.21■□□□□ 0.67
CDK5RAP3-217ENST00000580287 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
CDK5RAP3-217ENST00000580287 ITGAEP38570 1179 aa19.21■□□□□ 0.67
CDK5RAP3-217ENST00000580287 RAPGEF6Q8TEU7 1601 aa19.21■□□□□ 0.67
CDK5RAP3-217ENST00000580287 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-217ENST00000580287 CCDC18Q5T9S5 1454 aa19.17■□□□□ 0.66
CDK5RAP3-217ENST00000580287 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-217ENST00000580287 ABCA8O94911 1581 aa19.14■□□□□ 0.65
CDK5RAP3-217ENST00000580287 ATP10BO94823 1461 aa19.13■□□□□ 0.65
CDK5RAP3-217ENST00000580287 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
CDK5RAP3-217ENST00000580287 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
CDK5RAP3-217ENST00000580287 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
CDK5RAP3-217ENST00000580287 RRBP1Q9P2E9 1410 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-217ENST00000580287 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP3-217ENST00000580287 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-217ENST00000580287 PLEKHD1A6NEE1 506 aa19.08■□□□□ 0.65
CDK5RAP3-217ENST00000580287 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
CDK5RAP3-217ENST00000580287 TROQ12816 1431 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-217ENST00000580287 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
CDK5RAP3-217ENST00000580287 FGD6Q6ZV73 1430 aa19.02■□□□□ 0.63
CDK5RAP3-217ENST00000580287 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-217ENST00000580287 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
CDK5RAP3-217ENST00000580287 ABCC2Q92887 1545 aa19.01■□□□□ 0.63
CDK5RAP3-217ENST00000580287 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
CDK5RAP3-217ENST00000580287 ARHGEF11O15085 1522 aa18.98■□□□□ 0.63
CDK5RAP3-217ENST00000580287 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
CDK5RAP3-217ENST00000580287 KIF14Q15058 1648 aa18.97■□□□□ 0.63
CDK5RAP3-217ENST00000580287 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
CDK5RAP3-217ENST00000580287 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-217ENST00000580287 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
CDK5RAP3-217ENST00000580287 ADCY10Q96PN6 1610 aa18.92■□□□□ 0.62
CDK5RAP3-217ENST00000580287 UHRF1BP1LA0JNW5 1464 aa18.91■□□□□ 0.62
CDK5RAP3-217ENST00000580287 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
CDK5RAP3-217ENST00000580287 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
CDK5RAP3-217ENST00000580287 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
CDK5RAP3-217ENST00000580287 ZCCHC11Q5TAX3 1644 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-217ENST00000580287 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
CDK5RAP3-217ENST00000580287 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
CDK5RAP3-217ENST00000580287 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDK5RAP3-217ENST00000580287 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
CDK5RAP3-217ENST00000580287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDK5RAP3-217ENST00000580287 RRP7BPQ9NSQ0 103 aa18.83■□□□□ 0.61
CDK5RAP3-217ENST00000580287 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-217ENST00000580287 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
CDK5RAP3-217ENST00000580287 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-217ENST00000580287 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
CDK5RAP3-217ENST00000580287 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
CDK5RAP3-217ENST00000580287 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms