RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 SYNJ2O15056 1496 aa26.67■■□□□ 1.86
CCDC144NL-AS1-213ENST00000580278 GRIN2AQ12879 1464 aa26.67■■□□□ 1.86
CCDC144NL-AS1-213ENST00000580278 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.85
CCDC144NL-AS1-213ENST00000580278 EFCAB5A4FU69 1503 aa26.58■■□□□ 1.85
CCDC144NL-AS1-213ENST00000580278 FBLN2P98095 1184 aa26.55■■□□□ 1.84
CCDC144NL-AS1-213ENST00000580278 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
CCDC144NL-AS1-213ENST00000580278 SAMD9Q5K651 1589 aa26.54■■□□□ 1.84
CCDC144NL-AS1-213ENST00000580278 CEP170Q5SW79 1584 aa26.52■■□□□ 1.84
CCDC144NL-AS1-213ENST00000580278 CHMP7Q8WUX9 453 aaPredicted RBP26.52■■□□□ 1.84
CCDC144NL-AS1-213ENST00000580278 KIAA0586Q9BVV6 1533 aa26.51■■□□□ 1.83
CCDC144NL-AS1-213ENST00000580278 NUP160Q12769 1436 aa26.51■■□□□ 1.83
CCDC144NL-AS1-213ENST00000580278 UGGT2Q9NYU1 1516 aa26.45■■□□□ 1.83
CCDC144NL-AS1-213ENST00000580278 CHD1O14646 1710 aa26.43■■□□□ 1.82
CCDC144NL-AS1-213ENST00000580278 FHOD3Q2V2M9 1422 aa26.42■■□□□ 1.82
CCDC144NL-AS1-213ENST00000580278 P3H3Q8IVL6 736 aa26.42■■□□□ 1.82
CCDC144NL-AS1-213ENST00000580278 DISP1Q96F81 1524 aa26.33■■□□□ 1.81
CCDC144NL-AS1-213ENST00000580278 PPARGC1BQ86YN6 1023 aaKnown RBP26.32■■□□□ 1.8
CCDC144NL-AS1-213ENST00000580278 PCF11O94913 1555 aaKnown RBP26.32■■□□□ 1.8
CCDC144NL-AS1-213ENST00000580278 KIAA0556O60303 1618 aa26.3■■□□□ 1.8
CCDC144NL-AS1-213ENST00000580278 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
CCDC144NL-AS1-213ENST00000580278 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
CCDC144NL-AS1-213ENST00000580278 CASKIN1Q8WXD9 1431 aa26.25■■□□□ 1.79
CCDC144NL-AS1-213ENST00000580278 FYCO1Q9BQS8 1478 aa26.25■■□□□ 1.79
CCDC144NL-AS1-213ENST00000580278 MAP3K1Q13233 1512 aa26.24■■□□□ 1.79
CCDC144NL-AS1-213ENST00000580278 JPH4Q96JJ6 628 aa26.21■■□□□ 1.79
CCDC144NL-AS1-213ENST00000580278 APLP2Q06481 763 aa26.2■■□□□ 1.78
CCDC144NL-AS1-213ENST00000580278 TIAM1Q13009 1591 aa26.19■■□□□ 1.78
CCDC144NL-AS1-213ENST00000580278 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
CCDC144NL-AS1-213ENST00000580278 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
CCDC144NL-AS1-213ENST00000580278 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
CCDC144NL-AS1-213ENST00000580278 CFAP43Q8NDM7 1665 aa26.16■■□□□ 1.78
CCDC144NL-AS1-213ENST00000580278 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.77
CCDC144NL-AS1-213ENST00000580278 CARMIL2Q6F5E8 1435 aa26.13■■□□□ 1.77
CCDC144NL-AS1-213ENST00000580278 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
CCDC144NL-AS1-213ENST00000580278 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
CCDC144NL-AS1-213ENST00000580278 PRG4Q92954 1404 aaPredicted RBP26.07■■□□□ 1.76
CCDC144NL-AS1-213ENST00000580278 HECW1Q76N89 1606 aa26.05■■□□□ 1.76
CCDC144NL-AS1-213ENST00000580278 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
CCDC144NL-AS1-213ENST00000580278 ATP1B4Q9UN42 357 aaPredicted RBP26.04■■□□□ 1.76
CCDC144NL-AS1-213ENST00000580278 RAPGEF6Q8TEU7 1601 aa26■■□□□ 1.75
CCDC144NL-AS1-213ENST00000580278 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
CCDC144NL-AS1-213ENST00000580278 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
CCDC144NL-AS1-213ENST00000580278 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
CCDC144NL-AS1-213ENST00000580278 NUP153P49790 1475 aaKnown RBP25.96■■□□□ 1.75
CCDC144NL-AS1-213ENST00000580278 PLB1Q6P1J6 1458 aa25.95■■□□□ 1.74
CCDC144NL-AS1-213ENST00000580278 ABCA8O94911 1581 aa25.94■■□□□ 1.74
CCDC144NL-AS1-213ENST00000580278 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
CCDC144NL-AS1-213ENST00000580278 CDK13Q14004 1512 aaKnown RBP25.9■■□□□ 1.74
CCDC144NL-AS1-213ENST00000580278 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.74
CCDC144NL-AS1-213ENST00000580278 ARID3CA6NKF2 412 aa25.89■■□□□ 1.74
CCDC144NL-AS1-213ENST00000580278 PTPRGP23470 1445 aa25.89■■□□□ 1.73
CCDC144NL-AS1-213ENST00000580278 EHBP1L1Q8N3D4 1523 aa25.86■■□□□ 1.73
CCDC144NL-AS1-213ENST00000580278 RRBP1Q9P2E9 1410 aaKnown RBP25.85■■□□□ 1.73
CCDC144NL-AS1-213ENST00000580278 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
CCDC144NL-AS1-213ENST00000580278 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
CCDC144NL-AS1-213ENST00000580278 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
CCDC144NL-AS1-213ENST00000580278 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
CCDC144NL-AS1-213ENST00000580278 UACAQ9BZF9 1416 aa25.77■■□□□ 1.72
CCDC144NL-AS1-213ENST00000580278 NCOA2Q15596 1464 aa25.74■■□□□ 1.71
CCDC144NL-AS1-213ENST00000580278 ATP10BO94823 1461 aa25.74■■□□□ 1.71
CCDC144NL-AS1-213ENST00000580278 ABCC2Q92887 1545 aa25.72■■□□□ 1.71
CCDC144NL-AS1-213ENST00000580278 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
CCDC144NL-AS1-213ENST00000580278 UHRF1BP1LA0JNW5 1464 aa25.68■■□□□ 1.7
CCDC144NL-AS1-213ENST00000580278 TROQ12816 1431 aaPredicted RBP25.67■■□□□ 1.7
CCDC144NL-AS1-213ENST00000580278 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
CCDC144NL-AS1-213ENST00000580278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.7
CCDC144NL-AS1-213ENST00000580278 HNRNPUL2Q1KMD3 747 aaKnown RBP25.64■■□□□ 1.7
CCDC144NL-AS1-213ENST00000580278 ADCY10Q96PN6 1610 aa25.64■■□□□ 1.69
CCDC144NL-AS1-213ENST00000580278 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
CCDC144NL-AS1-213ENST00000580278 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
CCDC144NL-AS1-213ENST00000580278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.6■■□□□ 1.69
CCDC144NL-AS1-213ENST00000580278 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.69
CCDC144NL-AS1-213ENST00000580278 KIF14Q15058 1648 aa25.57■■□□□ 1.68
CCDC144NL-AS1-213ENST00000580278 ZCCHC11Q5TAX3 1644 aaKnown RBP25.54■■□□□ 1.68
CCDC144NL-AS1-213ENST00000580278 PLEKHD1A6NEE1 506 aa25.53■■□□□ 1.68
CCDC144NL-AS1-213ENST00000580278 MIA2Q96PC5 1412 aa25.52■■□□□ 1.68
CCDC144NL-AS1-213ENST00000580278 PTPN23Q9H3S7 1636 aa25.51■■□□□ 1.67
CCDC144NL-AS1-213ENST00000580278 TCOF1Q13428 1488 aaKnown RBP25.5■■□□□ 1.67
CCDC144NL-AS1-213ENST00000580278 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
CCDC144NL-AS1-213ENST00000580278 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
CCDC144NL-AS1-213ENST00000580278 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.66
CCDC144NL-AS1-213ENST00000580278 ITSN2Q9NZM3 1697 aa25.44■■□□□ 1.66
CCDC144NL-AS1-213ENST00000580278 CDC42BPAQ5VT25 1732 aa25.42■■□□□ 1.66
CCDC144NL-AS1-213ENST00000580278 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
CCDC144NL-AS1-213ENST00000580278 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
CCDC144NL-AS1-213ENST00000580278 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
CCDC144NL-AS1-213ENST00000580278 HRCP23327 699 aa25.36■■□□□ 1.65
CCDC144NL-AS1-213ENST00000580278 ITGAEP38570 1179 aa25.36■■□□□ 1.65
CCDC144NL-AS1-213ENST00000580278 CYB5RLQ6IPT4 315 aa25.36■■□□□ 1.65
CCDC144NL-AS1-213ENST00000580278 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
CCDC144NL-AS1-213ENST00000580278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.36■■□□□ 1.65
CCDC144NL-AS1-213ENST00000580278 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
CCDC144NL-AS1-213ENST00000580278 PREX2Q70Z35 1606 aa25.32■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 KCNH8Q96L42 1107 aa25.3■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 CAMSAP2Q08AD1 1489 aa25.3■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 CFDP1Q9UEE9 299 aaPredicted RBP25.3■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 ZNF644Q9H582 1327 aaPredicted RBP25.29■■□□□ 1.64
CCDC144NL-AS1-213ENST00000580278 DNMT1P26358 1616 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms