RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 NISCHQ9Y2I1 1504 aa38.76■■■■□ 3.79
CCDC144NL-AS1-213ENST00000580278 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
CCDC144NL-AS1-213ENST00000580278 ZCCHC6Q5VYS8 1495 aaKnown RBP32.56■■■□□ 2.8
CCDC144NL-AS1-213ENST00000580278 ABCC9O60706 1549 aa32.14■■■□□ 2.74
CCDC144NL-AS1-213ENST00000580278 DCAF1Q9Y4B6 1507 aa32.09■■■□□ 2.73
CCDC144NL-AS1-213ENST00000580278 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
CCDC144NL-AS1-213ENST00000580278 MYO15BQ96JP2 1530 aa31.78■■■□□ 2.68
CCDC144NL-AS1-213ENST00000580278 NACADO15069 1562 aa31.56■■■□□ 2.64
CCDC144NL-AS1-213ENST00000580278 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
CCDC144NL-AS1-213ENST00000580278 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
CCDC144NL-AS1-213ENST00000580278 SCRIBQ14160 1630 aa31.07■■■□□ 2.56
CCDC144NL-AS1-213ENST00000580278 UNC13AQ9UPW8 1703 aa30.72■■■□□ 2.51
CCDC144NL-AS1-213ENST00000580278 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
CCDC144NL-AS1-213ENST00000580278 PABPN1Q86U42 306 aaKnown RBP eCLIP30.34■■■□□ 2.45
CCDC144NL-AS1-213ENST00000580278 CECR2Q9BXF3 1484 aa30.11■■■□□ 2.41
CCDC144NL-AS1-213ENST00000580278 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
CCDC144NL-AS1-213ENST00000580278 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
CCDC144NL-AS1-213ENST00000580278 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
CCDC144NL-AS1-213ENST00000580278 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
CCDC144NL-AS1-213ENST00000580278 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
CCDC144NL-AS1-213ENST00000580278 WIZO95785 1651 aa29.66■■■□□ 2.34
CCDC144NL-AS1-213ENST00000580278 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
CCDC144NL-AS1-213ENST00000580278 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
CCDC144NL-AS1-213ENST00000580278 TOP2AP11388 1531 aaKnown RBP29.37■■■□□ 2.29
CCDC144NL-AS1-213ENST00000580278 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
CCDC144NL-AS1-213ENST00000580278 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
CCDC144NL-AS1-213ENST00000580278 NCAPD3P42695 1498 aa29.14■■■□□ 2.26
CCDC144NL-AS1-213ENST00000580278 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
CCDC144NL-AS1-213ENST00000580278 HMGXB3Q12766 1538 aa29.11■■■□□ 2.25
CCDC144NL-AS1-213ENST00000580278 CC2D2AQ9P2K1 1620 aa29.06■■■□□ 2.24
CCDC144NL-AS1-213ENST00000580278 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
CCDC144NL-AS1-213ENST00000580278 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
CCDC144NL-AS1-213ENST00000580278 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
CCDC144NL-AS1-213ENST00000580278 CFTRP13569 1480 aa28.46■■■□□ 2.15
CCDC144NL-AS1-213ENST00000580278 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
CCDC144NL-AS1-213ENST00000580278 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
CCDC144NL-AS1-213ENST00000580278 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
CCDC144NL-AS1-213ENST00000580278 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
CCDC144NL-AS1-213ENST00000580278 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.11
CCDC144NL-AS1-213ENST00000580278 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
CCDC144NL-AS1-213ENST00000580278 NESP48681 1621 aa28.16■■■□□ 2.1
CCDC144NL-AS1-213ENST00000580278 SYNJ1O43426 1573 aa28.13■■■□□ 2.09
CCDC144NL-AS1-213ENST00000580278 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
CCDC144NL-AS1-213ENST00000580278 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
CCDC144NL-AS1-213ENST00000580278 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
CCDC144NL-AS1-213ENST00000580278 CUX1P39880 1505 aa28■■■□□ 2.07
CCDC144NL-AS1-213ENST00000580278 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
CCDC144NL-AS1-213ENST00000580278 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
CCDC144NL-AS1-213ENST00000580278 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
CCDC144NL-AS1-213ENST00000580278 SOGA1O94964 1423 aa27.81■■■□□ 2.04
CCDC144NL-AS1-213ENST00000580278 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
CCDC144NL-AS1-213ENST00000580278 FAM9AQ8IZU1 332 aaPredicted RBP27.74■■■□□ 2.03
CCDC144NL-AS1-213ENST00000580278 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
CCDC144NL-AS1-213ENST00000580278 EEA1Q15075 1411 aa27.73■■■□□ 2.03
CCDC144NL-AS1-213ENST00000580278 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
CCDC144NL-AS1-213ENST00000580278 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
CCDC144NL-AS1-213ENST00000580278 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
CCDC144NL-AS1-213ENST00000580278 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
CCDC144NL-AS1-213ENST00000580278 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
CCDC144NL-AS1-213ENST00000580278 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
CCDC144NL-AS1-213ENST00000580278 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
CCDC144NL-AS1-213ENST00000580278 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
CCDC144NL-AS1-213ENST00000580278 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
CCDC144NL-AS1-213ENST00000580278 WDR62O43379 1518 aa27.48■■□□□ 1.99
CCDC144NL-AS1-213ENST00000580278 ABCA10Q8WWZ4 1543 aa27.47■■□□□ 1.99
CCDC144NL-AS1-213ENST00000580278 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
CCDC144NL-AS1-213ENST00000580278 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.98
CCDC144NL-AS1-213ENST00000580278 CUX2O14529 1486 aa27.45■■□□□ 1.98
CCDC144NL-AS1-213ENST00000580278 THOC2Q8NI27 1593 aaKnown RBP27.45■■□□□ 1.98
CCDC144NL-AS1-213ENST00000580278 WDR97A6NE52 1622 aa27.43■■□□□ 1.98
CCDC144NL-AS1-213ENST00000580278 KIF21BO75037 1637 aa27.41■■□□□ 1.98
CCDC144NL-AS1-213ENST00000580278 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
CCDC144NL-AS1-213ENST00000580278 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
CCDC144NL-AS1-213ENST00000580278 GOLGA3Q08378 1498 aa27.32■■□□□ 1.96
CCDC144NL-AS1-213ENST00000580278 IGF1RP08069 1367 aa27.29■■□□□ 1.96
CCDC144NL-AS1-213ENST00000580278 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
CCDC144NL-AS1-213ENST00000580278 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
CCDC144NL-AS1-213ENST00000580278 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
CCDC144NL-AS1-213ENST00000580278 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
CCDC144NL-AS1-213ENST00000580278 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
CCDC144NL-AS1-213ENST00000580278 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
CCDC144NL-AS1-213ENST00000580278 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
CCDC144NL-AS1-213ENST00000580278 CARMIL1Q5VZK9 1371 aa27.12■■□□□ 1.93
CCDC144NL-AS1-213ENST00000580278 CUL7Q14999 1698 aa27.11■■□□□ 1.93
CCDC144NL-AS1-213ENST00000580278 UBTFP17480 764 aaKnown RBP27.09■■□□□ 1.93
CCDC144NL-AS1-213ENST00000580278 ZNF608Q9ULD9 1512 aaPredicted RBP27.08■■□□□ 1.93
CCDC144NL-AS1-213ENST00000580278 CEP162Q5TB80 1403 aa27.06■■□□□ 1.92
CCDC144NL-AS1-213ENST00000580278 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.92
CCDC144NL-AS1-213ENST00000580278 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
CCDC144NL-AS1-213ENST00000580278 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
CCDC144NL-AS1-213ENST00000580278 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
CCDC144NL-AS1-213ENST00000580278 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
CCDC144NL-AS1-213ENST00000580278 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
CCDC144NL-AS1-213ENST00000580278 CLIP1P30622 1438 aa26.87■■□□□ 1.89
CCDC144NL-AS1-213ENST00000580278 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
CCDC144NL-AS1-213ENST00000580278 MAGI1Q96QZ7 1491 aaPredicted RBP26.78■■□□□ 1.88
CCDC144NL-AS1-213ENST00000580278 CTTNBP2Q8WZ74 1663 aa26.78■■□□□ 1.88
CCDC144NL-AS1-213ENST00000580278 RANGAP1P46060 587 aaPredicted RBP26.76■■□□□ 1.88
CCDC144NL-AS1-213ENST00000580278 ARHGAP35Q9NRY4 1499 aa26.7■■□□□ 1.86
CCDC144NL-AS1-213ENST00000580278 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 304.6 ms