RNA–Protein interactions for RNA: ENST00000578578.5

KRT18P55-202, Transcript of keratin 18 pseudogene 55, humanhuman

BASIC

Gene KRT18P55, Length 1,546 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-202ENST00000578578 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
KRT18P55-202ENST00000578578 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
KRT18P55-202ENST00000578578 APLP2Q06481 763 aa27.86■■■□□ 2.05
KRT18P55-202ENST00000578578 PPARGC1BQ86YN6 1023 aaKnown RBP27.84■■■□□ 2.05
KRT18P55-202ENST00000578578 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
KRT18P55-202ENST00000578578 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
KRT18P55-202ENST00000578578 SAMD9Q5K651 1589 aa27.68■■■□□ 2.02
KRT18P55-202ENST00000578578 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
KRT18P55-202ENST00000578578 GRIN2AQ12879 1464 aa27.67■■■□□ 2.02
KRT18P55-202ENST00000578578 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
KRT18P55-202ENST00000578578 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
KRT18P55-202ENST00000578578 FMN1Q68DA7 1419 aa27.63■■■□□ 2.01
KRT18P55-202ENST00000578578 FHOD3Q2V2M9 1422 aa27.62■■■□□ 2.01
KRT18P55-202ENST00000578578 KIAA0586Q9BVV6 1533 aa27.62■■■□□ 2.01
KRT18P55-202ENST00000578578 P3H3Q8IVL6 736 aa27.57■■■□□ 2
KRT18P55-202ENST00000578578 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
KRT18P55-202ENST00000578578 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
KRT18P55-202ENST00000578578 TTBK1Q5TCY1 1321 aaPredicted RBP27.57■■■□□ 2
KRT18P55-202ENST00000578578 UGGT2Q9NYU1 1516 aa27.56■■■□□ 2
KRT18P55-202ENST00000578578 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
KRT18P55-202ENST00000578578 HRCP23327 699 aa27.55■■■□□ 2
KRT18P55-202ENST00000578578 PCF11O94913 1555 aaKnown RBP27.53■■■□□ 2
KRT18P55-202ENST00000578578 TIAM1Q13009 1591 aa27.53■■■□□ 2
KRT18P55-202ENST00000578578 KANK4Q5T7N3 995 aaPredicted RBP27.5■■□□□ 1.99
KRT18P55-202ENST00000578578 NUP160Q12769 1436 aa27.48■■□□□ 1.99
KRT18P55-202ENST00000578578 CFAP43Q8NDM7 1665 aa27.44■■□□□ 1.98
KRT18P55-202ENST00000578578 CEP170Q5SW79 1584 aa27.43■■□□□ 1.98
KRT18P55-202ENST00000578578 LRRC9Q6ZRR7 1453 aa27.41■■□□□ 1.98
KRT18P55-202ENST00000578578 FBLN2P98095 1184 aa27.38■■□□□ 1.97
KRT18P55-202ENST00000578578 DISP1Q96F81 1524 aa27.36■■□□□ 1.97
KRT18P55-202ENST00000578578 KIAA0556O60303 1618 aa27.35■■□□□ 1.97
KRT18P55-202ENST00000578578 RRBP1Q9P2E9 1410 aaKnown RBP27.33■■□□□ 1.97
KRT18P55-202ENST00000578578 ATP1B4Q9UN42 357 aaPredicted RBP27.31■■□□□ 1.96
KRT18P55-202ENST00000578578 CCDC18Q5T9S5 1454 aa27.28■■□□□ 1.96
KRT18P55-202ENST00000578578 CARMIL2Q6F5E8 1435 aa27.27■■□□□ 1.96
KRT18P55-202ENST00000578578 ZEB1P37275 1124 aaPredicted RBP27.26■■□□□ 1.96
KRT18P55-202ENST00000578578 JPH4Q96JJ6 628 aa27.26■■□□□ 1.96
KRT18P55-202ENST00000578578 HECW1Q76N89 1606 aa27.26■■□□□ 1.95
KRT18P55-202ENST00000578578 CCNB3Q8WWL7 1395 aa27.2■■□□□ 1.95
KRT18P55-202ENST00000578578 CHD1O14646 1710 aa27.19■■□□□ 1.94
KRT18P55-202ENST00000578578 LRRIQ1Q96JM4 1722 aa27.18■■□□□ 1.94
KRT18P55-202ENST00000578578 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
KRT18P55-202ENST00000578578 EPRSP07814 1512 aaKnown RBP27.16■■□□□ 1.94
KRT18P55-202ENST00000578578 EHBP1L1Q8N3D4 1523 aa27.14■■□□□ 1.94
KRT18P55-202ENST00000578578 PHLDB1Q86UU1 1377 aa27.13■■□□□ 1.93
KRT18P55-202ENST00000578578 HNRNPUL2Q1KMD3 747 aaKnown RBP27.12■■□□□ 1.93
KRT18P55-202ENST00000578578 RAPGEF6Q8TEU7 1601 aa27.11■■□□□ 1.93
KRT18P55-202ENST00000578578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.08■■□□□ 1.93
KRT18P55-202ENST00000578578 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
KRT18P55-202ENST00000578578 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
KRT18P55-202ENST00000578578 PRG4Q92954 1404 aaPredicted RBP27.05■■□□□ 1.92
KRT18P55-202ENST00000578578 SUPT6HQ7KZ85 1726 aaKnown RBP27.04■■□□□ 1.92
KRT18P55-202ENST00000578578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.03■■□□□ 1.92
KRT18P55-202ENST00000578578 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
KRT18P55-202ENST00000578578 ARHGEF11O15085 1522 aa27.02■■□□□ 1.92
KRT18P55-202ENST00000578578 NCOA2Q15596 1464 aa27.01■■□□□ 1.92
KRT18P55-202ENST00000578578 MAGI3Q5TCQ9 1506 aa27.01■■□□□ 1.91
KRT18P55-202ENST00000578578 CDK13Q14004 1512 aaKnown RBP27■■□□□ 1.91
KRT18P55-202ENST00000578578 CDK11AQ9UQ88 783 aaPredicted RBP26.98■■□□□ 1.91
KRT18P55-202ENST00000578578 PLB1Q6P1J6 1458 aa26.97■■□□□ 1.91
KRT18P55-202ENST00000578578 ABCA8O94911 1581 aa26.97■■□□□ 1.91
KRT18P55-202ENST00000578578 CLASP1Q7Z460 1538 aa26.97■■□□□ 1.91
KRT18P55-202ENST00000578578 FGD6Q6ZV73 1430 aa26.97■■□□□ 1.91
KRT18P55-202ENST00000578578 MYOM3Q5VTT5 1437 aa26.96■■□□□ 1.91
KRT18P55-202ENST00000578578 PTPRGP23470 1445 aa26.94■■□□□ 1.9
KRT18P55-202ENST00000578578 FAM50AQ14320 339 aaKnown RBP26.89■■□□□ 1.89
KRT18P55-202ENST00000578578 TROQ12816 1431 aaPredicted RBP26.86■■□□□ 1.89
KRT18P55-202ENST00000578578 MIA2Q96PC5 1412 aa26.85■■□□□ 1.89
KRT18P55-202ENST00000578578 ARID3CA6NKF2 412 aa26.81■■□□□ 1.88
KRT18P55-202ENST00000578578 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
KRT18P55-202ENST00000578578 ATP10BO94823 1461 aa26.8■■□□□ 1.88
KRT18P55-202ENST00000578578 UACAQ9BZF9 1416 aa26.8■■□□□ 1.88
KRT18P55-202ENST00000578578 ITGAEP38570 1179 aa26.79■■□□□ 1.88
KRT18P55-202ENST00000578578 PTPN23Q9H3S7 1636 aa26.78■■□□□ 1.88
KRT18P55-202ENST00000578578 ADCY10Q96PN6 1610 aa26.76■■□□□ 1.88
KRT18P55-202ENST00000578578 CLSPNQ9HAW4 1339 aa26.76■■□□□ 1.87
KRT18P55-202ENST00000578578 SETD5Q9C0A6 1442 aa26.75■■□□□ 1.87
KRT18P55-202ENST00000578578 ERCC6L2Q5T890 1561 aa26.74■■□□□ 1.87
KRT18P55-202ENST00000578578 PLEKHD1A6NEE1 506 aa26.74■■□□□ 1.87
KRT18P55-202ENST00000578578 ABCC2Q92887 1545 aa26.7■■□□□ 1.86
KRT18P55-202ENST00000578578 RAB3GAP2Q9H2M9 1393 aa26.68■■□□□ 1.86
KRT18P55-202ENST00000578578 DHX57Q6P158 1386 aaKnown RBP26.68■■□□□ 1.86
KRT18P55-202ENST00000578578 UHRF1BP1LA0JNW5 1464 aa26.67■■□□□ 1.86
KRT18P55-202ENST00000578578 OSCARQ8IYS5 282 aa26.65■■□□□ 1.86
KRT18P55-202ENST00000578578 ITSN2Q9NZM3 1697 aa26.63■■□□□ 1.85
KRT18P55-202ENST00000578578 KIF14Q15058 1648 aa26.63■■□□□ 1.85
KRT18P55-202ENST00000578578 HFM1A2PYH4 1435 aa26.62■■□□□ 1.85
KRT18P55-202ENST00000578578 PTPRKQ15262 1439 aa26.62■■□□□ 1.85
KRT18P55-202ENST00000578578 GPATCH8Q9UKJ3 1502 aaKnown RBP26.6■■□□□ 1.85
KRT18P55-202ENST00000578578 ABCC10Q5T3U5 1492 aa26.6■■□□□ 1.85
KRT18P55-202ENST00000578578 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
KRT18P55-202ENST00000578578 CFDP1Q9UEE9 299 aaPredicted RBP26.55■■□□□ 1.84
KRT18P55-202ENST00000578578 KDM5BQ9UGL1 1544 aa26.54■■□□□ 1.84
KRT18P55-202ENST00000578578 NAIPQ13075 1403 aa26.51■■□□□ 1.83
KRT18P55-202ENST00000578578 DNMT1P26358 1616 aaKnown RBP26.51■■□□□ 1.83
KRT18P55-202ENST00000578578 DAPK1P53355 1430 aa26.5■■□□□ 1.83
KRT18P55-202ENST00000578578 ROCK1Q13464 1354 aa26.49■■□□□ 1.83
KRT18P55-202ENST00000578578 CAMSAP2Q08AD1 1489 aa26.48■■□□□ 1.83
KRT18P55-202ENST00000578578 ACIN1Q9UKV3 1341 aaKnown RBP26.47■■□□□ 1.83
KRT18P55-202ENST00000578578 ABCC5O15440 1437 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms