RNA–Protein interactions for RNA: ENST00000578578.5

KRT18P55-202, Transcript of keratin 18 pseudogene 55, humanhuman

BASIC

Gene KRT18P55, Length 1,546 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-202ENST00000578578 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
KRT18P55-202ENST00000578578 CCDC180Q9P1Z9 1646 aa35.15■■■■□ 3.22
KRT18P55-202ENST00000578578 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.03
KRT18P55-202ENST00000578578 DCAF1Q9Y4B6 1507 aa33.48■■■□□ 2.95
KRT18P55-202ENST00000578578 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
KRT18P55-202ENST00000578578 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
KRT18P55-202ENST00000578578 ABCC9O60706 1549 aa32.98■■■□□ 2.87
KRT18P55-202ENST00000578578 SHROOM4Q9ULL8 1493 aa32.88■■■□□ 2.85
KRT18P55-202ENST00000578578 NACADO15069 1562 aa32.73■■■□□ 2.83
KRT18P55-202ENST00000578578 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
KRT18P55-202ENST00000578578 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
KRT18P55-202ENST00000578578 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.68
KRT18P55-202ENST00000578578 UNC13AQ9UPW8 1703 aa31.59■■■□□ 2.65
KRT18P55-202ENST00000578578 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
KRT18P55-202ENST00000578578 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
KRT18P55-202ENST00000578578 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
KRT18P55-202ENST00000578578 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
KRT18P55-202ENST00000578578 MROH2BQ7Z745 1585 aa31.14■■■□□ 2.58
KRT18P55-202ENST00000578578 PABPN1Q86U42 306 aaKnown RBP eCLIP31.12■■■□□ 2.57
KRT18P55-202ENST00000578578 SMARCA4P51532 1647 aa30.97■■■□□ 2.55
KRT18P55-202ENST00000578578 WIZO95785 1651 aa30.85■■■□□ 2.53
KRT18P55-202ENST00000578578 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
KRT18P55-202ENST00000578578 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
KRT18P55-202ENST00000578578 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
KRT18P55-202ENST00000578578 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
KRT18P55-202ENST00000578578 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
KRT18P55-202ENST00000578578 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
KRT18P55-202ENST00000578578 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
KRT18P55-202ENST00000578578 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
KRT18P55-202ENST00000578578 NCAPD3P42695 1498 aa30.22■■■□□ 2.43
KRT18P55-202ENST00000578578 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
KRT18P55-202ENST00000578578 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
KRT18P55-202ENST00000578578 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
KRT18P55-202ENST00000578578 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
KRT18P55-202ENST00000578578 CFTRP13569 1480 aa29.57■■■□□ 2.32
KRT18P55-202ENST00000578578 WRNQ14191 1432 aaPredicted RBP eCLIP29.53■■■□□ 2.32
KRT18P55-202ENST00000578578 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
KRT18P55-202ENST00000578578 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
KRT18P55-202ENST00000578578 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
KRT18P55-202ENST00000578578 LOC105371045A0A1W2PR82 267 aa29.32■■■□□ 2.28
KRT18P55-202ENST00000578578 EEA1Q15075 1411 aa29.29■■■□□ 2.28
KRT18P55-202ENST00000578578 FAM9AQ8IZU1 332 aaPredicted RBP29.27■■■□□ 2.28
KRT18P55-202ENST00000578578 TOP2BQ02880 1626 aa29.26■■■□□ 2.28
KRT18P55-202ENST00000578578 BIVM-ERCC5R4GMW8 1640 aa29.22■■■□□ 2.27
KRT18P55-202ENST00000578578 SOGA1O94964 1423 aa29.15■■■□□ 2.26
KRT18P55-202ENST00000578578 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
KRT18P55-202ENST00000578578 CUX1P39880 1505 aa29.12■■■□□ 2.25
KRT18P55-202ENST00000578578 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
KRT18P55-202ENST00000578578 CSRNP3Q8WYN3 585 aa29.04■■■□□ 2.24
KRT18P55-202ENST00000578578 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
KRT18P55-202ENST00000578578 NESP48681 1621 aa28.99■■■□□ 2.23
KRT18P55-202ENST00000578578 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
KRT18P55-202ENST00000578578 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
KRT18P55-202ENST00000578578 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
KRT18P55-202ENST00000578578 DNMBPQ6XZF7 1577 aa28.85■■■□□ 2.21
KRT18P55-202ENST00000578578 KIF21BO75037 1637 aa28.81■■■□□ 2.2
KRT18P55-202ENST00000578578 GOLGA3Q08378 1498 aa28.81■■■□□ 2.2
KRT18P55-202ENST00000578578 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
KRT18P55-202ENST00000578578 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
KRT18P55-202ENST00000578578 TNIKQ9UKE5 1360 aa28.78■■■□□ 2.2
KRT18P55-202ENST00000578578 TOPBP1Q92547 1522 aa28.76■■■□□ 2.2
KRT18P55-202ENST00000578578 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
KRT18P55-202ENST00000578578 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
KRT18P55-202ENST00000578578 PRXQ9BXM0 1461 aa28.64■■■□□ 2.18
KRT18P55-202ENST00000578578 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
KRT18P55-202ENST00000578578 CUX2O14529 1486 aa28.63■■■□□ 2.17
KRT18P55-202ENST00000578578 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
KRT18P55-202ENST00000578578 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
KRT18P55-202ENST00000578578 UBTFP17480 764 aaKnown RBP28.62■■■□□ 2.17
KRT18P55-202ENST00000578578 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
KRT18P55-202ENST00000578578 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
KRT18P55-202ENST00000578578 RAPGEF2Q9Y4G8 1499 aa28.56■■■□□ 2.16
KRT18P55-202ENST00000578578 IGF1RP08069 1367 aa28.51■■■□□ 2.16
KRT18P55-202ENST00000578578 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
KRT18P55-202ENST00000578578 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
KRT18P55-202ENST00000578578 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
KRT18P55-202ENST00000578578 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
KRT18P55-202ENST00000578578 WDR62O43379 1518 aa28.34■■■□□ 2.13
KRT18P55-202ENST00000578578 CLIP1P30622 1438 aa28.33■■■□□ 2.13
KRT18P55-202ENST00000578578 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
KRT18P55-202ENST00000578578 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
KRT18P55-202ENST00000578578 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
KRT18P55-202ENST00000578578 CUL7Q14999 1698 aa28.28■■■□□ 2.12
KRT18P55-202ENST00000578578 GAPVD1Q14C86 1478 aa28.25■■■□□ 2.11
KRT18P55-202ENST00000578578 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
KRT18P55-202ENST00000578578 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
KRT18P55-202ENST00000578578 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
KRT18P55-202ENST00000578578 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
KRT18P55-202ENST00000578578 PCGF6Q9BYE7 350 aa28.15■■■□□ 2.1
KRT18P55-202ENST00000578578 VPS8Q8N3P4 1428 aa28.13■■■□□ 2.09
KRT18P55-202ENST00000578578 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
KRT18P55-202ENST00000578578 PBRM1Q86U86 1689 aa28.01■■■□□ 2.07
KRT18P55-202ENST00000578578 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.07
KRT18P55-202ENST00000578578 ARAP1Q96P48 1450 aa28■■■□□ 2.07
KRT18P55-202ENST00000578578 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
KRT18P55-202ENST00000578578 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
KRT18P55-202ENST00000578578 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
KRT18P55-202ENST00000578578 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
KRT18P55-202ENST00000578578 CTTNBP2Q8WZ74 1663 aa27.91■■■□□ 2.06
KRT18P55-202ENST00000578578 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 466.7 ms