RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 CUL7Q14999 1698 aa29.08■■■□□ 2.25
TMEM220-203ENST00000578345 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
TMEM220-203ENST00000578345 PRG4Q92954 1404 aaPredicted RBP29.05■■■□□ 2.24
TMEM220-203ENST00000578345 JPH4Q96JJ6 628 aa29■■■□□ 2.23
TMEM220-203ENST00000578345 EEA1Q15075 1411 aa28.93■■■□□ 2.22
TMEM220-203ENST00000578345 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
TMEM220-203ENST00000578345 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
TMEM220-203ENST00000578345 KIAA0586Q9BVV6 1533 aa28.88■■■□□ 2.21
TMEM220-203ENST00000578345 KIF13AQ9H1H9 1805 aa28.84■■■□□ 2.21
TMEM220-203ENST00000578345 FAM9AQ8IZU1 332 aaPredicted RBP28.82■■■□□ 2.2
TMEM220-203ENST00000578345 ADCY10Q96PN6 1610 aa28.79■■■□□ 2.2
TMEM220-203ENST00000578345 PRXQ9BXM0 1461 aa28.77■■■□□ 2.2
TMEM220-203ENST00000578345 MAPKBP1O60336 1514 aa28.7■■■□□ 2.19
TMEM220-203ENST00000578345 ABCC10Q5T3U5 1492 aa28.66■■■□□ 2.18
TMEM220-203ENST00000578345 DIP2BQ9P265 1576 aa28.63■■■□□ 2.17
TMEM220-203ENST00000578345 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
TMEM220-203ENST00000578345 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
TMEM220-203ENST00000578345 PTPRGP23470 1445 aa28.57■■■□□ 2.16
TMEM220-203ENST00000578345 FAM69CQ0P6D2 419 aa28.56■■■□□ 2.16
TMEM220-203ENST00000578345 CARMIL2Q6F5E8 1435 aa28.56■■■□□ 2.16
TMEM220-203ENST00000578345 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
TMEM220-203ENST00000578345 CTTNBP2Q8WZ74 1663 aa28.53■■■□□ 2.16
TMEM220-203ENST00000578345 DISP1Q96F81 1524 aa28.53■■■□□ 2.16
TMEM220-203ENST00000578345 KIF21BO75037 1637 aa28.51■■■□□ 2.15
TMEM220-203ENST00000578345 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
TMEM220-203ENST00000578345 ABCC2Q92887 1545 aa28.47■■■□□ 2.15
TMEM220-203ENST00000578345 UGGT2Q9NYU1 1516 aa28.46■■■□□ 2.15
TMEM220-203ENST00000578345 UBTFP17480 764 aaKnown RBP28.45■■■□□ 2.14
TMEM220-203ENST00000578345 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
TMEM220-203ENST00000578345 UHRF1BP1LA0JNW5 1464 aa28.41■■■□□ 2.14
TMEM220-203ENST00000578345 GOLGA3Q08378 1498 aa28.41■■■□□ 2.14
TMEM220-203ENST00000578345 TSPOAP1O95153 1857 aa28.41■■■□□ 2.14
TMEM220-203ENST00000578345 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
TMEM220-203ENST00000578345 KIAA0556O60303 1618 aa28.4■■■□□ 2.14
TMEM220-203ENST00000578345 UACAQ9BZF9 1416 aa28.37■■■□□ 2.13
TMEM220-203ENST00000578345 ASXL2Q76L83 1435 aa28.36■■■□□ 2.13
TMEM220-203ENST00000578345 KDM6BO15054 1643 aa28.32■■■□□ 2.12
TMEM220-203ENST00000578345 KDM5BQ9UGL1 1544 aa28.3■■■□□ 2.12
TMEM220-203ENST00000578345 PLB1Q6P1J6 1458 aa28.3■■■□□ 2.12
TMEM220-203ENST00000578345 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
TMEM220-203ENST00000578345 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
TMEM220-203ENST00000578345 GLI2P10070 1586 aa28.28■■■□□ 2.12
TMEM220-203ENST00000578345 ZCCHC11Q5TAX3 1644 aaKnown RBP28.26■■■□□ 2.11
TMEM220-203ENST00000578345 P3H3Q8IVL6 736 aa28.24■■■□□ 2.11
TMEM220-203ENST00000578345 EPRSP07814 1512 aaKnown RBP28.2■■■□□ 2.1
TMEM220-203ENST00000578345 MAP3K4Q9Y6R4 1608 aa28.17■■■□□ 2.1
TMEM220-203ENST00000578345 SAMD9Q5K651 1589 aa28.16■■■□□ 2.1
TMEM220-203ENST00000578345 ABCA8O94911 1581 aa28.14■■■□□ 2.1
TMEM220-203ENST00000578345 EFCAB5A4FU69 1503 aa28.13■■■□□ 2.09
TMEM220-203ENST00000578345 WDR7Q9Y4E6 1490 aa28.09■■■□□ 2.09
TMEM220-203ENST00000578345 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
TMEM220-203ENST00000578345 FHOD3Q2V2M9 1422 aa28.04■■■□□ 2.08
TMEM220-203ENST00000578345 KDM4FA0A1W2PPD8 638 aa28.04■■■□□ 2.08
TMEM220-203ENST00000578345 TEX14Q8IWB6 1497 aa27.99■■■□□ 2.07
TMEM220-203ENST00000578345 ARHGAP35Q9NRY4 1499 aa27.97■■■□□ 2.07
TMEM220-203ENST00000578345 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
TMEM220-203ENST00000578345 FMN1Q68DA7 1419 aa27.92■■■□□ 2.06
TMEM220-203ENST00000578345 CFAP43Q8NDM7 1665 aa27.92■■■□□ 2.06
TMEM220-203ENST00000578345 CLIP1P30622 1438 aa27.92■■■□□ 2.06
TMEM220-203ENST00000578345 RAPGEF6Q8TEU7 1601 aa27.9■■■□□ 2.06
TMEM220-203ENST00000578345 MAGI3Q5TCQ9 1506 aa27.89■■■□□ 2.06
TMEM220-203ENST00000578345 CD109Q6YHK3 1445 aa27.88■■■□□ 2.05
TMEM220-203ENST00000578345 ATP10BO94823 1461 aa27.88■■■□□ 2.05
TMEM220-203ENST00000578345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.87■■■□□ 2.05
TMEM220-203ENST00000578345 HNRNPUL2Q1KMD3 747 aaKnown RBP27.87■■■□□ 2.05
TMEM220-203ENST00000578345 KCNH8Q96L42 1107 aa27.86■■■□□ 2.05
TMEM220-203ENST00000578345 ARID3CA6NKF2 412 aa27.85■■■□□ 2.05
TMEM220-203ENST00000578345 ATP1B4Q9UN42 357 aaPredicted RBP27.85■■■□□ 2.05
TMEM220-203ENST00000578345 ADGRL1O94910 1474 aa27.83■■■□□ 2.05
TMEM220-203ENST00000578345 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
TMEM220-203ENST00000578345 NUP153P49790 1475 aaKnown RBP27.77■■■□□ 2.04
TMEM220-203ENST00000578345 ABCA9Q8IUA7 1624 aa27.74■■■□□ 2.03
TMEM220-203ENST00000578345 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
TMEM220-203ENST00000578345 HECW1Q76N89 1606 aa27.71■■■□□ 2.03
TMEM220-203ENST00000578345 CDK11AQ9UQ88 783 aaPredicted RBP27.69■■■□□ 2.02
TMEM220-203ENST00000578345 CASKIN1Q8WXD9 1431 aa27.67■■■□□ 2.02
TMEM220-203ENST00000578345 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
TMEM220-203ENST00000578345 FYCO1Q9BQS8 1478 aa27.6■■■□□ 2.01
TMEM220-203ENST00000578345 CDK13Q14004 1512 aaKnown RBP27.59■■■□□ 2.01
TMEM220-203ENST00000578345 PCF11O94913 1555 aaKnown RBP27.58■■■□□ 2.01
TMEM220-203ENST00000578345 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
TMEM220-203ENST00000578345 NEO1Q92859 1461 aa27.55■■■□□ 2
TMEM220-203ENST00000578345 FRMPD1Q5SYB0 1578 aa27.54■■■□□ 2
TMEM220-203ENST00000578345 PHLDB1Q86UU1 1377 aa27.53■■■□□ 2
TMEM220-203ENST00000578345 RAPGEF3O95398 923 aa27.48■■□□□ 1.99
TMEM220-203ENST00000578345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.47■■□□□ 1.99
TMEM220-203ENST00000578345 VPS8Q8N3P4 1428 aa27.47■■□□□ 1.99
TMEM220-203ENST00000578345 TTC37Q6PGP7 1564 aa27.47■■□□□ 1.99
TMEM220-203ENST00000578345 HECW2Q9P2P5 1572 aa27.46■■□□□ 1.99
TMEM220-203ENST00000578345 LRRIQ1Q96JM4 1722 aa27.44■■□□□ 1.98
TMEM220-203ENST00000578345 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
TMEM220-203ENST00000578345 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
TMEM220-203ENST00000578345 ADAMTSL3P82987 1691 aa27.38■■□□□ 1.97
TMEM220-203ENST00000578345 FANCAO15360 1455 aa27.38■■□□□ 1.97
TMEM220-203ENST00000578345 AKNAQ7Z591 1439 aa27.36■■□□□ 1.97
TMEM220-203ENST00000578345 APLP2Q06481 763 aa27.36■■□□□ 1.97
TMEM220-203ENST00000578345 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
TMEM220-203ENST00000578345 CFAP74Q9C0B2 1584 aa27.35■■□□□ 1.97
TMEM220-203ENST00000578345 KIF14Q15058 1648 aa27.35■■□□□ 1.97
TMEM220-203ENST00000578345 ARHGEF40Q8TER5 1519 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms