RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 NISCHQ9Y2I1 1504 aa41.58■■■■■ 4.25
TMEM220-203ENST00000578345 CCDC180Q9P1Z9 1646 aa37.26■■■■□ 3.56
TMEM220-203ENST00000578345 ABCC9O60706 1549 aa37.18■■■■□ 3.54
TMEM220-203ENST00000578345 RB1CC1Q8TDY2 1594 aa35.39■■■■□ 3.26
TMEM220-203ENST00000578345 NACADO15069 1562 aa35.17■■■■□ 3.22
TMEM220-203ENST00000578345 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
TMEM220-203ENST00000578345 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
TMEM220-203ENST00000578345 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
TMEM220-203ENST00000578345 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
TMEM220-203ENST00000578345 ZCCHC6Q5VYS8 1495 aaKnown RBP34.63■■■■□ 3.13
TMEM220-203ENST00000578345 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
TMEM220-203ENST00000578345 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
TMEM220-203ENST00000578345 DCAF1Q9Y4B6 1507 aa34.41■■■■□ 3.1
TMEM220-203ENST00000578345 SCRIBQ14160 1630 aa33.97■■■■□ 3.03
TMEM220-203ENST00000578345 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
TMEM220-203ENST00000578345 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
TMEM220-203ENST00000578345 EIF4G1Q04637 1599 aaKnown RBP33.56■■■□□ 2.96
TMEM220-203ENST00000578345 CECR2Q9BXF3 1484 aa33.47■■■□□ 2.95
TMEM220-203ENST00000578345 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
TMEM220-203ENST00000578345 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
TMEM220-203ENST00000578345 SMARCA4P51532 1647 aa32.41■■■□□ 2.78
TMEM220-203ENST00000578345 SMARCA2P51531 1590 aa32.29■■■□□ 2.76
TMEM220-203ENST00000578345 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
TMEM220-203ENST00000578345 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
TMEM220-203ENST00000578345 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
TMEM220-203ENST00000578345 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
TMEM220-203ENST00000578345 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
TMEM220-203ENST00000578345 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
TMEM220-203ENST00000578345 NESP48681 1621 aa32■■■□□ 2.71
TMEM220-203ENST00000578345 CUX2O14529 1486 aa31.99■■■□□ 2.71
TMEM220-203ENST00000578345 DNAJC5Q9H3Z4 198 aa31.87■■■□□ 2.69
TMEM220-203ENST00000578345 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
TMEM220-203ENST00000578345 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
TMEM220-203ENST00000578345 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
TMEM220-203ENST00000578345 WIZO95785 1651 aa31.67■■■□□ 2.66
TMEM220-203ENST00000578345 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
TMEM220-203ENST00000578345 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
TMEM220-203ENST00000578345 CADPSQ9ULU8 1353 aa31.47■■■□□ 2.63
TMEM220-203ENST00000578345 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
TMEM220-203ENST00000578345 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
TMEM220-203ENST00000578345 WDR62O43379 1518 aa31.23■■■□□ 2.59
TMEM220-203ENST00000578345 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
TMEM220-203ENST00000578345 CFTRP13569 1480 aa31.17■■■□□ 2.58
TMEM220-203ENST00000578345 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
TMEM220-203ENST00000578345 FANCD2Q9BXW9 1451 aa31.14■■■□□ 2.58
TMEM220-203ENST00000578345 CCDC88BA6NC98 1476 aa31.02■■■□□ 2.56
TMEM220-203ENST00000578345 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
TMEM220-203ENST00000578345 PRDM2Q13029 1718 aa30.89■■■□□ 2.54
TMEM220-203ENST00000578345 TOPBP1Q92547 1522 aa30.58■■■□□ 2.49
TMEM220-203ENST00000578345 ZNF608Q9ULD9 1512 aaPredicted RBP30.54■■■□□ 2.48
TMEM220-203ENST00000578345 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
TMEM220-203ENST00000578345 DNMBPQ6XZF7 1577 aa30.47■■■□□ 2.47
TMEM220-203ENST00000578345 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
TMEM220-203ENST00000578345 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
TMEM220-203ENST00000578345 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
TMEM220-203ENST00000578345 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
TMEM220-203ENST00000578345 TARBP1Q13395 1621 aaKnown RBP30.34■■■□□ 2.45
TMEM220-203ENST00000578345 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
TMEM220-203ENST00000578345 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.43
TMEM220-203ENST00000578345 RIMBP3CA6NJZ7 1639 aa30.19■■■□□ 2.42
TMEM220-203ENST00000578345 RIMBP3BA6NNM3 1639 aa30.19■■■□□ 2.42
TMEM220-203ENST00000578345 RIMBP3Q9UFD9 1639 aa30.19■■■□□ 2.42
TMEM220-203ENST00000578345 RAD54L2Q9Y4B4 1467 aa30.17■■■□□ 2.42
TMEM220-203ENST00000578345 CHD1O14646 1710 aa30.13■■■□□ 2.41
TMEM220-203ENST00000578345 CUX1P39880 1505 aa30.11■■■□□ 2.41
TMEM220-203ENST00000578345 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
TMEM220-203ENST00000578345 FGD5Q6ZNL6 1462 aa30.09■■■□□ 2.41
TMEM220-203ENST00000578345 SOGA1O94964 1423 aa30.08■■■□□ 2.41
TMEM220-203ENST00000578345 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
TMEM220-203ENST00000578345 WRNQ14191 1432 aaPredicted RBP eCLIP29.97■■■□□ 2.39
TMEM220-203ENST00000578345 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
TMEM220-203ENST00000578345 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
TMEM220-203ENST00000578345 FBLN2P98095 1184 aa29.91■■■□□ 2.38
TMEM220-203ENST00000578345 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
TMEM220-203ENST00000578345 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
TMEM220-203ENST00000578345 MAGI1Q96QZ7 1491 aaPredicted RBP29.83■■■□□ 2.37
TMEM220-203ENST00000578345 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
TMEM220-203ENST00000578345 BIVM-ERCC5R4GMW8 1640 aa29.8■■■□□ 2.36
TMEM220-203ENST00000578345 CLASP1Q7Z460 1538 aa29.8■■■□□ 2.36
TMEM220-203ENST00000578345 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
TMEM220-203ENST00000578345 PBRM1Q86U86 1689 aa29.77■■■□□ 2.36
TMEM220-203ENST00000578345 CYB5RLQ6IPT4 315 aa29.77■■■□□ 2.36
TMEM220-203ENST00000578345 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
TMEM220-203ENST00000578345 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
TMEM220-203ENST00000578345 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
TMEM220-203ENST00000578345 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
TMEM220-203ENST00000578345 CHMP7Q8WUX9 453 aaPredicted RBP29.7■■■□□ 2.35
TMEM220-203ENST00000578345 ADAMTS12P58397 1594 aa29.51■■■□□ 2.31
TMEM220-203ENST00000578345 GRIN2AQ12879 1464 aa29.47■■■□□ 2.31
TMEM220-203ENST00000578345 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
TMEM220-203ENST00000578345 NUP160Q12769 1436 aa29.38■■■□□ 2.29
TMEM220-203ENST00000578345 ERCC6L2Q5T890 1561 aa29.37■■■□□ 2.29
TMEM220-203ENST00000578345 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
TMEM220-203ENST00000578345 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
TMEM220-203ENST00000578345 TRHP20396 242 aaPredicted RBP29.36■■■□□ 2.29
TMEM220-203ENST00000578345 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
TMEM220-203ENST00000578345 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
TMEM220-203ENST00000578345 IGF1RP08069 1367 aa29.19■■■□□ 2.26
TMEM220-203ENST00000578345 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
TMEM220-203ENST00000578345 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms