RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 KDM6BO15054 1643 aa10.84□□□□□ -0.67
SMG6-219ENST00000575663 KDM4FA0A1W2PPD8 638 aa10.84□□□□□ -0.67
SMG6-219ENST00000575663 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
SMG6-219ENST00000575663 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
SMG6-219ENST00000575663 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
SMG6-219ENST00000575663 RUSC2Q8N2Y8 1516 aa10.76□□□□□ -0.69
SMG6-219ENST00000575663 ADCY10Q96PN6 1610 aa10.75□□□□□ -0.69
SMG6-219ENST00000575663 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
SMG6-219ENST00000575663 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
SMG6-219ENST00000575663 BIVM-ERCC5R4GMW8 1640 aa10.72□□□□□ -0.69
SMG6-219ENST00000575663 HECW2Q9P2P5 1572 aa10.68□□□□□ -0.7
SMG6-219ENST00000575663 TSPOAP1O95153 1857 aa10.67□□□□□ -0.7
SMG6-219ENST00000575663 KIAA0586Q9BVV6 1533 aa10.66□□□□□ -0.7
SMG6-219ENST00000575663 PLB1Q6P1J6 1458 aa10.65□□□□□ -0.7
SMG6-219ENST00000575663 PTPRGP23470 1445 aa10.64□□□□□ -0.71
SMG6-219ENST00000575663 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
SMG6-219ENST00000575663 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
SMG6-219ENST00000575663 GLI2P10070 1586 aa10.63□□□□□ -0.71
SMG6-219ENST00000575663 TEX14Q8IWB6 1497 aa10.61□□□□□ -0.71
SMG6-219ENST00000575663 CARMIL2Q6F5E8 1435 aa10.61□□□□□ -0.71
SMG6-219ENST00000575663 TNIKQ9UKE5 1360 aa10.6□□□□□ -0.71
SMG6-219ENST00000575663 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
SMG6-219ENST00000575663 PPRC1Q5VV67 1664 aaKnown RBP10.59□□□□□ -0.71
SMG6-219ENST00000575663 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.71
SMG6-219ENST00000575663 CUL7Q14999 1698 aa10.58□□□□□ -0.72
SMG6-219ENST00000575663 UHRF1BP1LA0JNW5 1464 aa10.57□□□□□ -0.72
SMG6-219ENST00000575663 COL17A1Q9UMD9 1497 aaPredicted RBP10.56□□□□□ -0.72
SMG6-219ENST00000575663 EPRSP07814 1512 aaKnown RBP10.56□□□□□ -0.72
SMG6-219ENST00000575663 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
SMG6-219ENST00000575663 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
SMG6-219ENST00000575663 MAP3K4Q9Y6R4 1608 aa10.55□□□□□ -0.72
SMG6-219ENST00000575663 IGF1RP08069 1367 aa10.53□□□□□ -0.72
SMG6-219ENST00000575663 SUPT5HO00267 1087 aaKnown RBP10.53□□□□□ -0.72
SMG6-219ENST00000575663 KDM5BQ9UGL1 1544 aa10.52□□□□□ -0.73
SMG6-219ENST00000575663 IQGAP2Q13576 1575 aa10.51□□□□□ -0.73
SMG6-219ENST00000575663 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
SMG6-219ENST00000575663 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
SMG6-219ENST00000575663 ZCCHC11Q5TAX3 1644 aaKnown RBP10.47□□□□□ -0.73
SMG6-219ENST00000575663 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.74
SMG6-219ENST00000575663 DISP1Q96F81 1524 aa10.46□□□□□ -0.74
SMG6-219ENST00000575663 CD109Q6YHK3 1445 aa10.44□□□□□ -0.74
SMG6-219ENST00000575663 LMTK3Q96Q04 1460 aa10.43□□□□□ -0.74
SMG6-219ENST00000575663 UGGT2Q9NYU1 1516 aa10.43□□□□□ -0.74
SMG6-219ENST00000575663 CFAP43Q8NDM7 1665 aa10.42□□□□□ -0.74
SMG6-219ENST00000575663 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
SMG6-219ENST00000575663 KIF21BO75037 1637 aa10.42□□□□□ -0.74
SMG6-219ENST00000575663 PTPRMP28827 1452 aa10.41□□□□□ -0.74
SMG6-219ENST00000575663 PCF11O94913 1555 aaKnown RBP10.39□□□□□ -0.75
SMG6-219ENST00000575663 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
SMG6-219ENST00000575663 ARAP3Q8WWN8 1544 aa10.37□□□□□ -0.75
SMG6-219ENST00000575663 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
SMG6-219ENST00000575663 PHLDB1Q86UU1 1377 aa10.35□□□□□ -0.75
SMG6-219ENST00000575663 GOLGA3Q08378 1498 aa10.35□□□□□ -0.75
SMG6-219ENST00000575663 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
SMG6-219ENST00000575663 ABCA8O94911 1581 aa10.33□□□□□ -0.76
SMG6-219ENST00000575663 ARID4BQ4LE39 1312 aaPredicted RBP10.33□□□□□ -0.76
SMG6-219ENST00000575663 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
SMG6-219ENST00000575663 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
SMG6-219ENST00000575663 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
SMG6-219ENST00000575663 SOCS7O14512 581 aa10.3□□□□□ -0.76
SMG6-219ENST00000575663 BCORL1Q5H9F3 1711 aa10.3□□□□□ -0.76
SMG6-219ENST00000575663 NEO1Q92859 1461 aa10.3□□□□□ -0.76
SMG6-219ENST00000575663 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
SMG6-219ENST00000575663 RAPGEF3O95398 923 aa10.27□□□□□ -0.77
SMG6-219ENST00000575663 ABCA9Q8IUA7 1624 aa10.26□□□□□ -0.77
SMG6-219ENST00000575663 HSPA2P54652 639 aa10.26□□□□□ -0.77
SMG6-219ENST00000575663 ARHGEF40Q8TER5 1519 aa10.26□□□□□ -0.77
SMG6-219ENST00000575663 POGZQ7Z3K3 1410 aa10.25□□□□□ -0.77
SMG6-219ENST00000575663 RIMS1Q86UR5 1692 aaKnown RBP10.25□□□□□ -0.77
SMG6-219ENST00000575663 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
SMG6-219ENST00000575663 FANCAO15360 1455 aa10.25□□□□□ -0.77
SMG6-219ENST00000575663 FRMPD1Q5SYB0 1578 aa10.25□□□□□ -0.77
SMG6-219ENST00000575663 ILDR2Q71H61 639 aa10.24□□□□□ -0.77
SMG6-219ENST00000575663 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
SMG6-219ENST00000575663 ATP10BO94823 1461 aa10.23□□□□□ -0.77
SMG6-219ENST00000575663 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
SMG6-219ENST00000575663 AKNAQ7Z591 1439 aa10.22□□□□□ -0.77
SMG6-219ENST00000575663 DENND4BO75064 1496 aaPredicted RBP10.22□□□□□ -0.77
SMG6-219ENST00000575663 SPATA31D1Q6ZQQ2 1576 aa10.22□□□□□ -0.77
SMG6-219ENST00000575663 EFCAB5A4FU69 1503 aa10.19□□□□□ -0.78
SMG6-219ENST00000575663 FHOD3Q2V2M9 1422 aa10.19□□□□□ -0.78
SMG6-219ENST00000575663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
SMG6-219ENST00000575663 HNRNPUL2Q1KMD3 747 aaKnown RBP10.19□□□□□ -0.78
SMG6-219ENST00000575663 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
SMG6-219ENST00000575663 ZFYVE16Q7Z3T8 1539 aa10.17□□□□□ -0.78
SMG6-219ENST00000575663 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
SMG6-219ENST00000575663 TTC37Q6PGP7 1564 aa10.17□□□□□ -0.78
SMG6-219ENST00000575663 ZMYM4Q5VZL5 1548 aa10.17□□□□□ -0.78
SMG6-219ENST00000575663 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
SMG6-219ENST00000575663 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
SMG6-219ENST00000575663 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.78
SMG6-219ENST00000575663 RICTORQ6R327 1708 aa10.15□□□□□ -0.78
SMG6-219ENST00000575663 PRXQ9BXM0 1461 aa10.15□□□□□ -0.78
SMG6-219ENST00000575663 MLECQ14165 292 aa10.14□□□□□ -0.79
SMG6-219ENST00000575663 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
SMG6-219ENST00000575663 UHRF1BP1Q6BDS2 1440 aa10.13□□□□□ -0.79
SMG6-219ENST00000575663 FER1L4A9Z1Z3 1794 aa10.13□□□□□ -0.79
SMG6-219ENST00000575663 PREX1Q8TCU6 1659 aa10.12□□□□□ -0.79
SMG6-219ENST00000575663 NUP153P49790 1475 aaKnown RBP10.11□□□□□ -0.79
SMG6-219ENST00000575663 SAMD9Q5K651 1589 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms