RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
TRAP1-210ENST00000574494 IQGAP2Q13576 1575 aa22.03■■□□□ 1.12
TRAP1-210ENST00000574494 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
TRAP1-210ENST00000574494 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
TRAP1-210ENST00000574494 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
TRAP1-210ENST00000574494 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
TRAP1-210ENST00000574494 KIAA0586Q9BVV6 1533 aa21.92■■□□□ 1.1
TRAP1-210ENST00000574494 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
TRAP1-210ENST00000574494 CHD1O14646 1710 aa21.89■■□□□ 1.1
TRAP1-210ENST00000574494 UGGT2Q9NYU1 1516 aa21.88■■□□□ 1.09
TRAP1-210ENST00000574494 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
TRAP1-210ENST00000574494 APLP2Q06481 763 aa21.87■■□□□ 1.09
TRAP1-210ENST00000574494 NUP160Q12769 1436 aa21.87■■□□□ 1.09
TRAP1-210ENST00000574494 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
TRAP1-210ENST00000574494 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
TRAP1-210ENST00000574494 FHOD3Q2V2M9 1422 aa21.81■■□□□ 1.08
TRAP1-210ENST00000574494 PCF11O94913 1555 aaKnown RBP21.81■■□□□ 1.08
TRAP1-210ENST00000574494 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
TRAP1-210ENST00000574494 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
TRAP1-210ENST00000574494 MAP3K1Q13233 1512 aa21.79■■□□□ 1.08
TRAP1-210ENST00000574494 CFAP43Q8NDM7 1665 aa21.79■■□□□ 1.08
TRAP1-210ENST00000574494 FBLN2P98095 1184 aa21.78■■□□□ 1.08
TRAP1-210ENST00000574494 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
TRAP1-210ENST00000574494 TIAM1Q13009 1591 aa21.73■■□□□ 1.07
TRAP1-210ENST00000574494 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
TRAP1-210ENST00000574494 HECW1Q76N89 1606 aa21.7■■□□□ 1.06
TRAP1-210ENST00000574494 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
TRAP1-210ENST00000574494 DISP1Q96F81 1524 aa21.68■■□□□ 1.06
TRAP1-210ENST00000574494 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
TRAP1-210ENST00000574494 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.05
TRAP1-210ENST00000574494 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
TRAP1-210ENST00000574494 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
TRAP1-210ENST00000574494 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
TRAP1-210ENST00000574494 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.05
TRAP1-210ENST00000574494 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
TRAP1-210ENST00000574494 LRRIQ1Q96JM4 1722 aa21.56■■□□□ 1.04
TRAP1-210ENST00000574494 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
TRAP1-210ENST00000574494 EHBP1L1Q8N3D4 1523 aa21.52■■□□□ 1.04
TRAP1-210ENST00000574494 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
TRAP1-210ENST00000574494 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
TRAP1-210ENST00000574494 TTBK1Q5TCY1 1321 aaPredicted RBP21.51■■□□□ 1.03
TRAP1-210ENST00000574494 SUPT6HQ7KZ85 1726 aaKnown RBP21.47■■□□□ 1.03
TRAP1-210ENST00000574494 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
TRAP1-210ENST00000574494 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
TRAP1-210ENST00000574494 ABCA8O94911 1581 aa21.44■■□□□ 1.02
TRAP1-210ENST00000574494 KANK4Q5T7N3 995 aaPredicted RBP21.43■■□□□ 1.02
TRAP1-210ENST00000574494 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
TRAP1-210ENST00000574494 PTPRGP23470 1445 aa21.38■■□□□ 1.01
TRAP1-210ENST00000574494 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
TRAP1-210ENST00000574494 CDK13Q14004 1512 aaKnown RBP21.38■■□□□ 1.01
TRAP1-210ENST00000574494 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
TRAP1-210ENST00000574494 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
TRAP1-210ENST00000574494 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
TRAP1-210ENST00000574494 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
TRAP1-210ENST00000574494 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
TRAP1-210ENST00000574494 OSCARQ8IYS5 282 aa21.3■■□□□ 1
TRAP1-210ENST00000574494 NCOA2Q15596 1464 aa21.3■■□□□ 1
TRAP1-210ENST00000574494 UACAQ9BZF9 1416 aa21.29■■□□□ 1
TRAP1-210ENST00000574494 MAGI3Q5TCQ9 1506 aa21.29■■□□□ 1
TRAP1-210ENST00000574494 ABCC2Q92887 1545 aa21.29■■□□□ 1
TRAP1-210ENST00000574494 ARHGEF11O15085 1522 aa21.29■■□□□ 1
TRAP1-210ENST00000574494 PHLDB1Q86UU1 1377 aa21.26■□□□□ 0.99
TRAP1-210ENST00000574494 ITSN2Q9NZM3 1697 aa21.25■□□□□ 0.99
TRAP1-210ENST00000574494 TROQ12816 1431 aaPredicted RBP21.25■□□□□ 0.99
TRAP1-210ENST00000574494 UHRF1BP1LA0JNW5 1464 aa21.25■□□□□ 0.99
TRAP1-210ENST00000574494 MYOM3Q5VTT5 1437 aa21.24■□□□□ 0.99
TRAP1-210ENST00000574494 KIF14Q15058 1648 aa21.24■□□□□ 0.99
TRAP1-210ENST00000574494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
TRAP1-210ENST00000574494 FGD6Q6ZV73 1430 aa21.22■□□□□ 0.99
TRAP1-210ENST00000574494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
TRAP1-210ENST00000574494 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
TRAP1-210ENST00000574494 ATP10BO94823 1461 aa21.2■□□□□ 0.98
TRAP1-210ENST00000574494 PTPN23Q9H3S7 1636 aa21.18■□□□□ 0.98
TRAP1-210ENST00000574494 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
TRAP1-210ENST00000574494 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
TRAP1-210ENST00000574494 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
TRAP1-210ENST00000574494 PLEKHD1A6NEE1 506 aa21.13■□□□□ 0.97
TRAP1-210ENST00000574494 KDM5BQ9UGL1 1544 aa21.12■□□□□ 0.97
TRAP1-210ENST00000574494 TCOF1Q13428 1488 aaKnown RBP21.12■□□□□ 0.97
TRAP1-210ENST00000574494 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
TRAP1-210ENST00000574494 CDC42BPAQ5VT25 1732 aa21.07■□□□□ 0.96
TRAP1-210ENST00000574494 HRCP23327 699 aa21.03■□□□□ 0.96
TRAP1-210ENST00000574494 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
TRAP1-210ENST00000574494 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
TRAP1-210ENST00000574494 MYO5CQ9NQX4 1742 aa21.02■□□□□ 0.96
TRAP1-210ENST00000574494 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
TRAP1-210ENST00000574494 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
TRAP1-210ENST00000574494 DNMT1P26358 1616 aaKnown RBP20.99■□□□□ 0.95
TRAP1-210ENST00000574494 CAMSAP2Q08AD1 1489 aa20.96■□□□□ 0.95
TRAP1-210ENST00000574494 ITGAEP38570 1179 aa20.96■□□□□ 0.95
TRAP1-210ENST00000574494 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
TRAP1-210ENST00000574494 CROCC2H7BZ55 1655 aa20.95■□□□□ 0.94
TRAP1-210ENST00000574494 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
TRAP1-210ENST00000574494 RIMBP3CA6NJZ7 1639 aa20.94■□□□□ 0.94
TRAP1-210ENST00000574494 RIMBP3BA6NNM3 1639 aa20.94■□□□□ 0.94
TRAP1-210ENST00000574494 RIMBP3Q9UFD9 1639 aa20.94■□□□□ 0.94
TRAP1-210ENST00000574494 GCC2Q8IWJ2 1684 aa20.94■□□□□ 0.94
TRAP1-210ENST00000574494 CCER1Q8TC90 406 aaPredicted RBP20.94■□□□□ 0.94
TRAP1-210ENST00000574494 DNAJC5Q9H3Z4 198 aa20.94■□□□□ 0.94
TRAP1-210ENST00000574494 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms