RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 NISCHQ9Y2I1 1504 aa31.99■■■□□ 2.71
TRAP1-210ENST00000574494 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
TRAP1-210ENST00000574494 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.9
TRAP1-210ENST00000574494 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
TRAP1-210ENST00000574494 ABCC9O60706 1549 aa26.39■■□□□ 1.82
TRAP1-210ENST00000574494 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
TRAP1-210ENST00000574494 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
TRAP1-210ENST00000574494 NACADO15069 1562 aa26.16■■□□□ 1.78
TRAP1-210ENST00000574494 RB1CC1Q8TDY2 1594 aa25.96■■□□□ 1.75
TRAP1-210ENST00000574494 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
TRAP1-210ENST00000574494 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
TRAP1-210ENST00000574494 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
TRAP1-210ENST00000574494 BICRAQ9NZM4 1560 aa25.02■■□□□ 1.6
TRAP1-210ENST00000574494 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
TRAP1-210ENST00000574494 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
TRAP1-210ENST00000574494 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.559e-7■□□□□ 10.1
TRAP1-210ENST00000574494 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.55
TRAP1-210ENST00000574494 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
TRAP1-210ENST00000574494 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
TRAP1-210ENST00000574494 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TRAP1-210ENST00000574494 WIZO95785 1651 aa24.47■■□□□ 1.51
TRAP1-210ENST00000574494 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
TRAP1-210ENST00000574494 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
TRAP1-210ENST00000574494 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
TRAP1-210ENST00000574494 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
TRAP1-210ENST00000574494 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
TRAP1-210ENST00000574494 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
TRAP1-210ENST00000574494 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
TRAP1-210ENST00000574494 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
TRAP1-210ENST00000574494 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
TRAP1-210ENST00000574494 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
TRAP1-210ENST00000574494 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
TRAP1-210ENST00000574494 PRDM2Q13029 1718 aa23.61■■□□□ 1.37
TRAP1-210ENST00000574494 CFTRP13569 1480 aa23.47■■□□□ 1.35
TRAP1-210ENST00000574494 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
TRAP1-210ENST00000574494 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
TRAP1-210ENST00000574494 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
TRAP1-210ENST00000574494 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
TRAP1-210ENST00000574494 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.32
TRAP1-210ENST00000574494 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
TRAP1-210ENST00000574494 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
TRAP1-210ENST00000574494 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
TRAP1-210ENST00000574494 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
TRAP1-210ENST00000574494 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
TRAP1-210ENST00000574494 NESP48681 1621 aa23.1■■□□□ 1.29
TRAP1-210ENST00000574494 EEA1Q15075 1411 aa23.08■■□□□ 1.29
TRAP1-210ENST00000574494 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
TRAP1-210ENST00000574494 CUX1P39880 1505 aa23.08■■□□□ 1.28
TRAP1-210ENST00000574494 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
TRAP1-210ENST00000574494 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
TRAP1-210ENST00000574494 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
TRAP1-210ENST00000574494 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
TRAP1-210ENST00000574494 SOGA1O94964 1423 aa22.87■■□□□ 1.25
TRAP1-210ENST00000574494 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
TRAP1-210ENST00000574494 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
TRAP1-210ENST00000574494 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
TRAP1-210ENST00000574494 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
TRAP1-210ENST00000574494 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
TRAP1-210ENST00000574494 KIF21BO75037 1637 aa22.78■■□□□ 1.24
TRAP1-210ENST00000574494 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
TRAP1-210ENST00000574494 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
TRAP1-210ENST00000574494 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
TRAP1-210ENST00000574494 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
TRAP1-210ENST00000574494 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
TRAP1-210ENST00000574494 WDR62O43379 1518 aa22.71■■□□□ 1.23
TRAP1-210ENST00000574494 GOLGA3Q08378 1498 aa22.7■■□□□ 1.22
TRAP1-210ENST00000574494 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
TRAP1-210ENST00000574494 CUX2O14529 1486 aa22.69■■□□□ 1.22
TRAP1-210ENST00000574494 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
TRAP1-210ENST00000574494 THOC2Q8NI27 1593 aaKnown RBP22.66■■□□□ 1.22
TRAP1-210ENST00000574494 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.21
TRAP1-210ENST00000574494 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
TRAP1-210ENST00000574494 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
TRAP1-210ENST00000574494 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
TRAP1-210ENST00000574494 CUL7Q14999 1698 aa22.56■■□□□ 1.2
TRAP1-210ENST00000574494 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
TRAP1-210ENST00000574494 TNIKQ9UKE5 1360 aa22.53■■□□□ 1.2
TRAP1-210ENST00000574494 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
TRAP1-210ENST00000574494 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
TRAP1-210ENST00000574494 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
TRAP1-210ENST00000574494 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
TRAP1-210ENST00000574494 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
TRAP1-210ENST00000574494 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
TRAP1-210ENST00000574494 IGF1RP08069 1367 aa22.43■■□□□ 1.18
TRAP1-210ENST00000574494 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
TRAP1-210ENST00000574494 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
TRAP1-210ENST00000574494 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
TRAP1-210ENST00000574494 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
TRAP1-210ENST00000574494 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
TRAP1-210ENST00000574494 CTTNBP2Q8WZ74 1663 aa22.3■■□□□ 1.16
TRAP1-210ENST00000574494 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
TRAP1-210ENST00000574494 CLIP1P30622 1438 aa22.26■■□□□ 1.15
TRAP1-210ENST00000574494 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
TRAP1-210ENST00000574494 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
TRAP1-210ENST00000574494 AQRO60306 1485 aaKnown RBP eCLIP22.23■■□□□ 1.155e-7■■■■■ 38
TRAP1-210ENST00000574494 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
TRAP1-210ENST00000574494 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
TRAP1-210ENST00000574494 EFCAB5A4FU69 1503 aa22.12■■□□□ 1.13
TRAP1-210ENST00000574494 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
TRAP1-210ENST00000574494 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms