RNA–Protein interactions for RNA: ENST00000570111.5

GGA2-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-217ENST00000570111 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
GGA2-217ENST00000570111 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
GGA2-217ENST00000570111 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
GGA2-217ENST00000570111 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
GGA2-217ENST00000570111 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
GGA2-217ENST00000570111 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
GGA2-217ENST00000570111 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
GGA2-217ENST00000570111 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
GGA2-217ENST00000570111 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
GGA2-217ENST00000570111 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
GGA2-217ENST00000570111 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
GGA2-217ENST00000570111 APLP2Q06481 763 aa13.02□□□□□ -0.33
GGA2-217ENST00000570111 UGGT2Q9NYU1 1516 aa13□□□□□ -0.33
GGA2-217ENST00000570111 NUP160Q12769 1436 aa12.99□□□□□ -0.33
GGA2-217ENST00000570111 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
GGA2-217ENST00000570111 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
GGA2-217ENST00000570111 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
GGA2-217ENST00000570111 FBLN2P98095 1184 aa12.96□□□□□ -0.33
GGA2-217ENST00000570111 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
GGA2-217ENST00000570111 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.34
GGA2-217ENST00000570111 CHD1O14646 1710 aa12.95□□□□□ -0.34
GGA2-217ENST00000570111 FYCO1Q9BQS8 1478 aa12.95□□□□□ -0.34
GGA2-217ENST00000570111 CASKIN1Q8WXD9 1431 aa12.93□□□□□ -0.34
GGA2-217ENST00000570111 PCF11O94913 1555 aaKnown RBP12.93□□□□□ -0.34
GGA2-217ENST00000570111 KIAA0556O60303 1618 aa12.92□□□□□ -0.34
GGA2-217ENST00000570111 CARMIL2Q6F5E8 1435 aa12.91□□□□□ -0.34
GGA2-217ENST00000570111 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
GGA2-217ENST00000570111 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
GGA2-217ENST00000570111 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
GGA2-217ENST00000570111 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
GGA2-217ENST00000570111 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
GGA2-217ENST00000570111 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
GGA2-217ENST00000570111 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
GGA2-217ENST00000570111 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
GGA2-217ENST00000570111 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
GGA2-217ENST00000570111 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
GGA2-217ENST00000570111 LRRC9Q6ZRR7 1453 aa12.82□□□□□ -0.36
GGA2-217ENST00000570111 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
GGA2-217ENST00000570111 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
GGA2-217ENST00000570111 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
GGA2-217ENST00000570111 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
GGA2-217ENST00000570111 KANK4Q5T7N3 995 aaPredicted RBP12.78□□□□□ -0.36
GGA2-217ENST00000570111 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
GGA2-217ENST00000570111 LRRIQ1Q96JM4 1722 aa12.77□□□□□ -0.36
GGA2-217ENST00000570111 EPRSP07814 1512 aaKnown RBP12.77□□□□□ -0.37
GGA2-217ENST00000570111 EHBP1L1Q8N3D4 1523 aa12.77□□□□□ -0.37
GGA2-217ENST00000570111 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
GGA2-217ENST00000570111 ABCA8O94911 1581 aa12.73□□□□□ -0.37
GGA2-217ENST00000570111 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
GGA2-217ENST00000570111 PTPRGP23470 1445 aa12.72□□□□□ -0.37
GGA2-217ENST00000570111 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
GGA2-217ENST00000570111 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
GGA2-217ENST00000570111 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.38
GGA2-217ENST00000570111 CDK11AQ9UQ88 783 aaPredicted RBP12.7□□□□□ -0.38
GGA2-217ENST00000570111 CDK13Q14004 1512 aaKnown RBP12.69□□□□□ -0.38
GGA2-217ENST00000570111 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
GGA2-217ENST00000570111 CCNB3Q8WWL7 1395 aa12.68□□□□□ -0.38
GGA2-217ENST00000570111 UACAQ9BZF9 1416 aa12.66□□□□□ -0.38
GGA2-217ENST00000570111 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
GGA2-217ENST00000570111 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
GGA2-217ENST00000570111 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
GGA2-217ENST00000570111 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.38
GGA2-217ENST00000570111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGA2-217ENST00000570111 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
GGA2-217ENST00000570111 ABCC2Q92887 1545 aa12.64□□□□□ -0.39
GGA2-217ENST00000570111 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
GGA2-217ENST00000570111 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
GGA2-217ENST00000570111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
GGA2-217ENST00000570111 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
GGA2-217ENST00000570111 UHRF1BP1LA0JNW5 1464 aa12.63□□□□□ -0.39
GGA2-217ENST00000570111 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
GGA2-217ENST00000570111 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
GGA2-217ENST00000570111 ATP10BO94823 1461 aa12.61□□□□□ -0.39
GGA2-217ENST00000570111 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
GGA2-217ENST00000570111 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
GGA2-217ENST00000570111 KIF14Q15058 1648 aa12.59□□□□□ -0.39
GGA2-217ENST00000570111 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
GGA2-217ENST00000570111 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
GGA2-217ENST00000570111 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
GGA2-217ENST00000570111 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
GGA2-217ENST00000570111 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
GGA2-217ENST00000570111 FAM50AQ14320 339 aaKnown RBP12.55□□□□□ -0.4
GGA2-217ENST00000570111 KDM5BQ9UGL1 1544 aa12.55□□□□□ -0.4
GGA2-217ENST00000570111 HRCP23327 699 aa12.54□□□□□ -0.4
GGA2-217ENST00000570111 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
GGA2-217ENST00000570111 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
GGA2-217ENST00000570111 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
GGA2-217ENST00000570111 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
GGA2-217ENST00000570111 GPATCH8Q9UKJ3 1502 aaKnown RBP12.49□□□□□ -0.41
GGA2-217ENST00000570111 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
GGA2-217ENST00000570111 ITGAEP38570 1179 aa12.47□□□□□ -0.41
GGA2-217ENST00000570111 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
GGA2-217ENST00000570111 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
GGA2-217ENST00000570111 PREX2Q70Z35 1606 aa12.46□□□□□ -0.41
GGA2-217ENST00000570111 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
GGA2-217ENST00000570111 CAMSAP2Q08AD1 1489 aa12.45□□□□□ -0.42
GGA2-217ENST00000570111 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
GGA2-217ENST00000570111 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
GGA2-217ENST00000570111 SETD5Q9C0A6 1442 aa12.45□□□□□ -0.42
GGA2-217ENST00000570111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms