RNA–Protein interactions for RNA: ENST00000570111.5

GGA2-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-217ENST00000570111 NISCHQ9Y2I1 1504 aa19.01■□□□□ 0.63
GGA2-217ENST00000570111 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
GGA2-217ENST00000570111 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
GGA2-217ENST00000570111 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
GGA2-217ENST00000570111 ABCC9O60706 1549 aa15.67■□□□□ 0.1
GGA2-217ENST00000570111 AEBP2Q6ZN18 517 aaPredicted RBP15.66■□□□□ 0.1
GGA2-217ENST00000570111 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
GGA2-217ENST00000570111 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
GGA2-217ENST00000570111 NACADO15069 1562 aa15.53■□□□□ 0.08
GGA2-217ENST00000570111 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
GGA2-217ENST00000570111 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
GGA2-217ENST00000570111 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
GGA2-217ENST00000570111 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
GGA2-217ENST00000570111 UNC13AQ9UPW8 1703 aa15.03■□□□□ -0
GGA2-217ENST00000570111 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
GGA2-217ENST00000570111 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
GGA2-217ENST00000570111 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
GGA2-217ENST00000570111 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
GGA2-217ENST00000570111 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
GGA2-217ENST00000570111 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
GGA2-217ENST00000570111 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
GGA2-217ENST00000570111 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
GGA2-217ENST00000570111 WIZO95785 1651 aa14.52□□□□□ -0.08
GGA2-217ENST00000570111 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
GGA2-217ENST00000570111 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
GGA2-217ENST00000570111 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
GGA2-217ENST00000570111 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
GGA2-217ENST00000570111 ATAD2BQ9ULI0 1458 aa14.38□□□□□ -0.11
GGA2-217ENST00000570111 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
GGA2-217ENST00000570111 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
GGA2-217ENST00000570111 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
GGA2-217ENST00000570111 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
GGA2-217ENST00000570111 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
GGA2-217ENST00000570111 CFTRP13569 1480 aa13.96□□□□□ -0.17
GGA2-217ENST00000570111 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
GGA2-217ENST00000570111 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
GGA2-217ENST00000570111 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
GGA2-217ENST00000570111 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
GGA2-217ENST00000570111 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.191e-7■■■■■ 66.8
GGA2-217ENST00000570111 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
GGA2-217ENST00000570111 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
GGA2-217ENST00000570111 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
GGA2-217ENST00000570111 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
GGA2-217ENST00000570111 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
GGA2-217ENST00000570111 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
GGA2-217ENST00000570111 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
GGA2-217ENST00000570111 EEA1Q15075 1411 aa13.73□□□□□ -0.21
GGA2-217ENST00000570111 NESP48681 1621 aa13.72□□□□□ -0.21
GGA2-217ENST00000570111 CUX1P39880 1505 aa13.7□□□□□ -0.22
GGA2-217ENST00000570111 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
GGA2-217ENST00000570111 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
GGA2-217ENST00000570111 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
GGA2-217ENST00000570111 SOGA1O94964 1423 aa13.61□□□□□ -0.23
GGA2-217ENST00000570111 FAM9AQ8IZU1 332 aaPredicted RBP13.6□□□□□ -0.23
GGA2-217ENST00000570111 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
GGA2-217ENST00000570111 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
GGA2-217ENST00000570111 FGD5Q6ZNL6 1462 aa13.58□□□□□ -0.24
GGA2-217ENST00000570111 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
GGA2-217ENST00000570111 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
GGA2-217ENST00000570111 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
GGA2-217ENST00000570111 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
GGA2-217ENST00000570111 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
GGA2-217ENST00000570111 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
GGA2-217ENST00000570111 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
GGA2-217ENST00000570111 KIF21BO75037 1637 aa13.51□□□□□ -0.25
GGA2-217ENST00000570111 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
GGA2-217ENST00000570111 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
GGA2-217ENST00000570111 WDR62O43379 1518 aa13.48□□□□□ -0.25
GGA2-217ENST00000570111 CUX2O14529 1486 aa13.48□□□□□ -0.25
GGA2-217ENST00000570111 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
GGA2-217ENST00000570111 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
GGA2-217ENST00000570111 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
GGA2-217ENST00000570111 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
GGA2-217ENST00000570111 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
GGA2-217ENST00000570111 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
GGA2-217ENST00000570111 TNIKQ9UKE5 1360 aa13.41□□□□□ -0.26
GGA2-217ENST00000570111 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
GGA2-217ENST00000570111 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
GGA2-217ENST00000570111 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
GGA2-217ENST00000570111 CUL7Q14999 1698 aa13.37□□□□□ -0.27
GGA2-217ENST00000570111 IGF1RP08069 1367 aa13.37□□□□□ -0.27
GGA2-217ENST00000570111 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
GGA2-217ENST00000570111 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
GGA2-217ENST00000570111 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
GGA2-217ENST00000570111 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
GGA2-217ENST00000570111 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
GGA2-217ENST00000570111 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
GGA2-217ENST00000570111 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
GGA2-217ENST00000570111 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
GGA2-217ENST00000570111 GRIN2BQ13224 1484 aa13.26□□□□□ -0.29
GGA2-217ENST00000570111 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
GGA2-217ENST00000570111 CLIP1P30622 1438 aa13.23□□□□□ -0.29
GGA2-217ENST00000570111 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
GGA2-217ENST00000570111 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
GGA2-217ENST00000570111 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.293e-8■■■■□ 24
GGA2-217ENST00000570111 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
GGA2-217ENST00000570111 ADAMTS12P58397 1594 aa13.21□□□□□ -0.29
GGA2-217ENST00000570111 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
GGA2-217ENST00000570111 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
GGA2-217ENST00000570111 SNAPC4Q5SXM2 1469 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms