RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 ZEB1P37275 1124 aaPredicted RBP27.37■■□□□ 1.97
NEIL1-221ENST00000569035 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
NEIL1-221ENST00000569035 CLIP1P30622 1438 aa27.37■■□□□ 1.97
NEIL1-221ENST00000569035 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
NEIL1-221ENST00000569035 SYNJ2O15056 1496 aa27.31■■□□□ 1.96
NEIL1-221ENST00000569035 VPS8Q8N3P4 1428 aa27.26■■□□□ 1.95
NEIL1-221ENST00000569035 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
NEIL1-221ENST00000569035 APLP2Q06481 763 aa27.09■■□□□ 1.93
NEIL1-221ENST00000569035 NUP160Q12769 1436 aa27.09■■□□□ 1.93
NEIL1-221ENST00000569035 CEP170Q5SW79 1584 aa27.07■■□□□ 1.92
NEIL1-221ENST00000569035 KIAA0586Q9BVV6 1533 aa27.07■■□□□ 1.92
NEIL1-221ENST00000569035 CHD1O14646 1710 aa27.07■■□□□ 1.92
NEIL1-221ENST00000569035 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
NEIL1-221ENST00000569035 P3H3Q8IVL6 736 aa27.03■■□□□ 1.92
NEIL1-221ENST00000569035 ARHGAP35Q9NRY4 1499 aa27.01■■□□□ 1.91
NEIL1-221ENST00000569035 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
NEIL1-221ENST00000569035 IQGAP2Q13576 1575 aa27■■□□□ 1.91
NEIL1-221ENST00000569035 PPARGC1BQ86YN6 1023 aaKnown RBP26.99■■□□□ 1.91
NEIL1-221ENST00000569035 JPH4Q96JJ6 628 aa26.97■■□□□ 1.91
NEIL1-221ENST00000569035 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
NEIL1-221ENST00000569035 UGGT2Q9NYU1 1516 aa26.89■■□□□ 1.89
NEIL1-221ENST00000569035 FHOD3Q2V2M9 1422 aa26.88■■□□□ 1.89
NEIL1-221ENST00000569035 EFCAB5A4FU69 1503 aa26.87■■□□□ 1.89
NEIL1-221ENST00000569035 SAMD9Q5K651 1589 aa26.83■■□□□ 1.89
NEIL1-221ENST00000569035 DISP1Q96F81 1524 aa26.82■■□□□ 1.88
NEIL1-221ENST00000569035 MAP3K1Q13233 1512 aa26.81■■□□□ 1.88
NEIL1-221ENST00000569035 CLASP1Q7Z460 1538 aa26.78■■□□□ 1.88
NEIL1-221ENST00000569035 TTBK1Q5TCY1 1321 aaPredicted RBP26.78■■□□□ 1.88
NEIL1-221ENST00000569035 PRG4Q92954 1404 aaPredicted RBP26.78■■□□□ 1.88
NEIL1-221ENST00000569035 CARMIL2Q6F5E8 1435 aa26.76■■□□□ 1.87
NEIL1-221ENST00000569035 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
NEIL1-221ENST00000569035 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
NEIL1-221ENST00000569035 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
NEIL1-221ENST00000569035 KIAA0556O60303 1618 aa26.73■■□□□ 1.87
NEIL1-221ENST00000569035 ARHGEF11O15085 1522 aa26.71■■□□□ 1.87
NEIL1-221ENST00000569035 CCER1Q8TC90 406 aaPredicted RBP26.69■■□□□ 1.86
NEIL1-221ENST00000569035 ATP1B4Q9UN42 357 aaPredicted RBP26.69■■□□□ 1.86
NEIL1-221ENST00000569035 FMN1Q68DA7 1419 aa26.69■■□□□ 1.86
NEIL1-221ENST00000569035 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
NEIL1-221ENST00000569035 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
NEIL1-221ENST00000569035 CASKIN1Q8WXD9 1431 aa26.59■■□□□ 1.85
NEIL1-221ENST00000569035 TIAM1Q13009 1591 aa26.59■■□□□ 1.85
NEIL1-221ENST00000569035 PTPRGP23470 1445 aa26.58■■□□□ 1.85
NEIL1-221ENST00000569035 PCF11O94913 1555 aaKnown RBP26.56■■□□□ 1.84
NEIL1-221ENST00000569035 RRBP1Q9P2E9 1410 aaKnown RBP26.56■■□□□ 1.84
NEIL1-221ENST00000569035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.56■■□□□ 1.84
NEIL1-221ENST00000569035 FYCO1Q9BQS8 1478 aa26.54■■□□□ 1.84
NEIL1-221ENST00000569035 CFAP43Q8NDM7 1665 aa26.53■■□□□ 1.84
NEIL1-221ENST00000569035 PLB1Q6P1J6 1458 aa26.51■■□□□ 1.83
NEIL1-221ENST00000569035 ARID3CA6NKF2 412 aa26.51■■□□□ 1.83
NEIL1-221ENST00000569035 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
NEIL1-221ENST00000569035 LRRC9Q6ZRR7 1453 aa26.44■■□□□ 1.82
NEIL1-221ENST00000569035 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
NEIL1-221ENST00000569035 NUP153P49790 1475 aaKnown RBP26.41■■□□□ 1.82
NEIL1-221ENST00000569035 RAPGEF6Q8TEU7 1601 aa26.4■■□□□ 1.82
NEIL1-221ENST00000569035 CLSPNQ9HAW4 1339 aa26.4■■□□□ 1.82
NEIL1-221ENST00000569035 CCNB3Q8WWL7 1395 aa26.4■■□□□ 1.82
NEIL1-221ENST00000569035 UACAQ9BZF9 1416 aa26.39■■□□□ 1.82
NEIL1-221ENST00000569035 ABCA8O94911 1581 aa26.39■■□□□ 1.81
NEIL1-221ENST00000569035 HNRNPUL2Q1KMD3 747 aaKnown RBP26.38■■□□□ 1.81
NEIL1-221ENST00000569035 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
NEIL1-221ENST00000569035 EPRSP07814 1512 aaKnown RBP26.38■■□□□ 1.81
NEIL1-221ENST00000569035 CDK13Q14004 1512 aaKnown RBP26.34■■□□□ 1.81
NEIL1-221ENST00000569035 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
NEIL1-221ENST00000569035 LRRIQ1Q96JM4 1722 aa26.31■■□□□ 1.8
NEIL1-221ENST00000569035 ATP10BO94823 1461 aa26.28■■□□□ 1.8
NEIL1-221ENST00000569035 MTUS2Q5JR59 1369 aa26.28■■□□□ 1.8
NEIL1-221ENST00000569035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.28■■□□□ 1.8
NEIL1-221ENST00000569035 ABCC2Q92887 1545 aa26.26■■□□□ 1.79
NEIL1-221ENST00000569035 CDK11AQ9UQ88 783 aaPredicted RBP26.25■■□□□ 1.79
NEIL1-221ENST00000569035 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
NEIL1-221ENST00000569035 MAGI3Q5TCQ9 1506 aa26.21■■□□□ 1.79
NEIL1-221ENST00000569035 PLEKHD1A6NEE1 506 aa26.19■■□□□ 1.78
NEIL1-221ENST00000569035 ADCY10Q96PN6 1610 aa26.15■■□□□ 1.78
NEIL1-221ENST00000569035 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.78
NEIL1-221ENST00000569035 KDM5BQ9UGL1 1544 aa26.14■■□□□ 1.77
NEIL1-221ENST00000569035 PHLDB1Q86UU1 1377 aa26.12■■□□□ 1.77
NEIL1-221ENST00000569035 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
NEIL1-221ENST00000569035 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
NEIL1-221ENST00000569035 NPM1P06748 294 aaKnown RBP eCLIP26.1■■□□□ 1.77
NEIL1-221ENST00000569035 NCOA2Q15596 1464 aa26.08■■□□□ 1.77
NEIL1-221ENST00000569035 DHX57Q6P158 1386 aaKnown RBP26.07■■□□□ 1.76
NEIL1-221ENST00000569035 ZCCHC11Q5TAX3 1644 aaKnown RBP26.05■■□□□ 1.76
NEIL1-221ENST00000569035 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
NEIL1-221ENST00000569035 SETD5Q9C0A6 1442 aa26.01■■□□□ 1.75
NEIL1-221ENST00000569035 FGD6Q6ZV73 1430 aa26■■□□□ 1.75
NEIL1-221ENST00000569035 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
NEIL1-221ENST00000569035 KIF14Q15058 1648 aa25.95■■□□□ 1.75
NEIL1-221ENST00000569035 ASXL2Q76L83 1435 aa25.95■■□□□ 1.74
NEIL1-221ENST00000569035 FAM50AQ14320 339 aaKnown RBP25.94■■□□□ 1.74
NEIL1-221ENST00000569035 RAB3GAP2Q9H2M9 1393 aa25.92■■□□□ 1.74
NEIL1-221ENST00000569035 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
NEIL1-221ENST00000569035 ZNF316A6NFI3 1004 aaPredicted RBP25.92■■□□□ 1.74
NEIL1-221ENST00000569035 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
NEIL1-221ENST00000569035 ABCC10Q5T3U5 1492 aa25.89■■□□□ 1.74
NEIL1-221ENST00000569035 GPATCH8Q9UKJ3 1502 aaKnown RBP25.87■■□□□ 1.73
NEIL1-221ENST00000569035 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
NEIL1-221ENST00000569035 MIA2Q96PC5 1412 aa25.86■■□□□ 1.73
NEIL1-221ENST00000569035 ITGAEP38570 1179 aa25.86■■□□□ 1.73
NEIL1-221ENST00000569035 ACIN1Q9UKV3 1341 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms