RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 NISCHQ9Y2I1 1504 aa39.39■■■■□ 3.9
NEIL1-221ENST00000569035 CCDC180Q9P1Z9 1646 aa34.4■■■■□ 3.1
NEIL1-221ENST00000569035 ABCC9O60706 1549 aa33.2■■■□□ 2.91
NEIL1-221ENST00000569035 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
NEIL1-221ENST00000569035 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
NEIL1-221ENST00000569035 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.8
NEIL1-221ENST00000569035 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
NEIL1-221ENST00000569035 NACADO15069 1562 aa32.24■■■□□ 2.75
NEIL1-221ENST00000569035 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
NEIL1-221ENST00000569035 SHROOM4Q9ULL8 1493 aa31.95■■■□□ 2.7
NEIL1-221ENST00000569035 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
NEIL1-221ENST00000569035 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
NEIL1-221ENST00000569035 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.59
NEIL1-221ENST00000569035 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
NEIL1-221ENST00000569035 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
NEIL1-221ENST00000569035 SUPT5HO00267 1087 aaKnown RBP30.66■■■□□ 2.5
NEIL1-221ENST00000569035 DNAJC5BQ9UF47 199 aa30.56■■■□□ 2.48
NEIL1-221ENST00000569035 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
NEIL1-221ENST00000569035 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
NEIL1-221ENST00000569035 BAZ1AQ9NRL2 1556 aaPredicted RBP30.42■■■□□ 2.46
NEIL1-221ENST00000569035 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
NEIL1-221ENST00000569035 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
NEIL1-221ENST00000569035 WIZO95785 1651 aa30.11■■■□□ 2.41
NEIL1-221ENST00000569035 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
NEIL1-221ENST00000569035 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.39
NEIL1-221ENST00000569035 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.39
NEIL1-221ENST00000569035 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
NEIL1-221ENST00000569035 NCAPD3P42695 1498 aa29.82■■■□□ 2.36
NEIL1-221ENST00000569035 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
NEIL1-221ENST00000569035 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
NEIL1-221ENST00000569035 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
NEIL1-221ENST00000569035 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
NEIL1-221ENST00000569035 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
NEIL1-221ENST00000569035 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
NEIL1-221ENST00000569035 CFTRP13569 1480 aa29.04■■■□□ 2.24
NEIL1-221ENST00000569035 TRIM41Q8WV44 630 aa28.94■■■□□ 2.22
NEIL1-221ENST00000569035 NESP48681 1621 aa28.94■■■□□ 2.22
NEIL1-221ENST00000569035 LAMC3Q9Y6N6 1575 aa28.8■■■□□ 2.2
NEIL1-221ENST00000569035 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
NEIL1-221ENST00000569035 FANCD2Q9BXW9 1451 aa28.7■■■□□ 2.19
NEIL1-221ENST00000569035 PDS5BQ9NTI5 1447 aa28.68■■■□□ 2.18
NEIL1-221ENST00000569035 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
NEIL1-221ENST00000569035 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
NEIL1-221ENST00000569035 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
NEIL1-221ENST00000569035 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
NEIL1-221ENST00000569035 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
NEIL1-221ENST00000569035 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
NEIL1-221ENST00000569035 CUX1P39880 1505 aa28.47■■■□□ 2.15
NEIL1-221ENST00000569035 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.14
NEIL1-221ENST00000569035 TOP2BQ02880 1626 aa28.39■■■□□ 2.14
NEIL1-221ENST00000569035 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
NEIL1-221ENST00000569035 EEA1Q15075 1411 aa28.36■■■□□ 2.13
NEIL1-221ENST00000569035 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
NEIL1-221ENST00000569035 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
NEIL1-221ENST00000569035 THOC2Q8NI27 1593 aaKnown RBP28.31■■■□□ 2.12
NEIL1-221ENST00000569035 MRC2Q9UBG0 1479 aa28.3■■■□□ 2.12
NEIL1-221ENST00000569035 DNMBPQ6XZF7 1577 aa28.3■■■□□ 2.12
NEIL1-221ENST00000569035 CUX2O14529 1486 aa28.26■■■□□ 2.11
NEIL1-221ENST00000569035 FAM9AQ8IZU1 332 aaPredicted RBP28.24■■■□□ 2.11
NEIL1-221ENST00000569035 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
NEIL1-221ENST00000569035 SOGA1O94964 1423 aa28.2■■■□□ 2.11
NEIL1-221ENST00000569035 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
NEIL1-221ENST00000569035 WDR62O43379 1518 aa28.14■■■□□ 2.09
NEIL1-221ENST00000569035 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
NEIL1-221ENST00000569035 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
NEIL1-221ENST00000569035 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
NEIL1-221ENST00000569035 TRIM26Q12899 539 aaPredicted RBP27.97■■■□□ 2.07
NEIL1-221ENST00000569035 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
NEIL1-221ENST00000569035 ABCA10Q8WWZ4 1543 aa27.96■■■□□ 2.07
NEIL1-221ENST00000569035 TDRD9Q8NDG6 1382 aaKnown RBP27.92■■■□□ 2.06
NEIL1-221ENST00000569035 PCGF6Q9BYE7 350 aa27.92■■■□□ 2.06
NEIL1-221ENST00000569035 EHMT2Q96KQ7 1210 aa27.9■■■□□ 2.06
NEIL1-221ENST00000569035 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
NEIL1-221ENST00000569035 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
NEIL1-221ENST00000569035 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.06
NEIL1-221ENST00000569035 GOLGA3Q08378 1498 aa27.86■■■□□ 2.05
NEIL1-221ENST00000569035 KIF21BO75037 1637 aa27.85■■■□□ 2.05
NEIL1-221ENST00000569035 IGF1RP08069 1367 aa27.82■■■□□ 2.04
NEIL1-221ENST00000569035 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
NEIL1-221ENST00000569035 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.04
NEIL1-221ENST00000569035 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
NEIL1-221ENST00000569035 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
NEIL1-221ENST00000569035 HRCP23327 699 aa27.73■■■□□ 2.03
NEIL1-221ENST00000569035 ABCA5Q8WWZ7 1642 aa27.71■■■□□ 2.03
NEIL1-221ENST00000569035 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
NEIL1-221ENST00000569035 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
NEIL1-221ENST00000569035 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
NEIL1-221ENST00000569035 RAPGEF2Q9Y4G8 1499 aa27.61■■■□□ 2.01
NEIL1-221ENST00000569035 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
NEIL1-221ENST00000569035 UBTFP17480 764 aaKnown RBP27.6■■■□□ 2.01
NEIL1-221ENST00000569035 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
NEIL1-221ENST00000569035 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
NEIL1-221ENST00000569035 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
NEIL1-221ENST00000569035 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
NEIL1-221ENST00000569035 SNAPC4Q5SXM2 1469 aa27.48■■□□□ 1.99
NEIL1-221ENST00000569035 CUL7Q14999 1698 aa27.46■■□□□ 1.99
NEIL1-221ENST00000569035 FHAD1B1AJZ9 1412 aa27.46■■□□□ 1.99
NEIL1-221ENST00000569035 MAGI1Q96QZ7 1491 aaPredicted RBP27.39■■□□□ 1.98
NEIL1-221ENST00000569035 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
NEIL1-221ENST00000569035 FBLN2P98095 1184 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 260.2 ms