RNA–Protein interactions for RNA: ENST00000568254.5

RSRP1-217, Transcript of arginine and serine rich protein 1, humanhuman

TSL 1 (best)

Gene RSRP1, Length 2,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-217ENST00000568254 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
RSRP1-217ENST00000568254 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
RSRP1-217ENST00000568254 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
RSRP1-217ENST00000568254 VPS8Q8N3P4 1428 aa24.53■■□□□ 1.52
RSRP1-217ENST00000568254 FBLN2P98095 1184 aa24.5■■□□□ 1.51
RSRP1-217ENST00000568254 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
RSRP1-217ENST00000568254 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.5
RSRP1-217ENST00000568254 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
RSRP1-217ENST00000568254 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
RSRP1-217ENST00000568254 KIAA0586Q9BVV6 1533 aa24.42■■□□□ 1.5
RSRP1-217ENST00000568254 PPARGC1BQ86YN6 1023 aaKnown RBP24.41■■□□□ 1.5
RSRP1-217ENST00000568254 SAMD9Q5K651 1589 aa24.4■■□□□ 1.5
RSRP1-217ENST00000568254 CHD1O14646 1710 aa24.4■■□□□ 1.5
RSRP1-217ENST00000568254 NUP160Q12769 1436 aa24.38■■□□□ 1.49
RSRP1-217ENST00000568254 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
RSRP1-217ENST00000568254 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
RSRP1-217ENST00000568254 APLP2Q06481 763 aa24.28■■□□□ 1.48
RSRP1-217ENST00000568254 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
RSRP1-217ENST00000568254 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
RSRP1-217ENST00000568254 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
RSRP1-217ENST00000568254 DISP1Q96F81 1524 aa24.23■■□□□ 1.47
RSRP1-217ENST00000568254 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
RSRP1-217ENST00000568254 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
RSRP1-217ENST00000568254 KIAA0556O60303 1618 aa24.22■■□□□ 1.47
RSRP1-217ENST00000568254 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
RSRP1-217ENST00000568254 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
RSRP1-217ENST00000568254 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
RSRP1-217ENST00000568254 ATP1B4Q9UN42 357 aaPredicted RBP24.14■■□□□ 1.45
RSRP1-217ENST00000568254 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
RSRP1-217ENST00000568254 MAP3K1Q13233 1512 aa24.11■■□□□ 1.45
RSRP1-217ENST00000568254 TIAM1Q13009 1591 aa24.11■■□□□ 1.45
RSRP1-217ENST00000568254 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
RSRP1-217ENST00000568254 LRRIQ1Q96JM4 1722 aa24.09■■□□□ 1.45
RSRP1-217ENST00000568254 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.45
RSRP1-217ENST00000568254 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
RSRP1-217ENST00000568254 CLASP1Q7Z460 1538 aa24.06■■□□□ 1.44
RSRP1-217ENST00000568254 PRG4Q92954 1404 aaPredicted RBP24.06■■□□□ 1.44
RSRP1-217ENST00000568254 HECW1Q76N89 1606 aa24■■□□□ 1.43
RSRP1-217ENST00000568254 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
RSRP1-217ENST00000568254 RAPGEF6Q8TEU7 1601 aa23.98■■□□□ 1.43
RSRP1-217ENST00000568254 ERCC6L2Q5T890 1561 aa23.94■■□□□ 1.42
RSRP1-217ENST00000568254 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
RSRP1-217ENST00000568254 EPRSP07814 1512 aaKnown RBP23.93■■□□□ 1.42
RSRP1-217ENST00000568254 PLB1Q6P1J6 1458 aa23.93■■□□□ 1.42
RSRP1-217ENST00000568254 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
RSRP1-217ENST00000568254 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
RSRP1-217ENST00000568254 PTPRGP23470 1445 aa23.89■■□□□ 1.42
RSRP1-217ENST00000568254 CDK13Q14004 1512 aaKnown RBP23.88■■□□□ 1.41
RSRP1-217ENST00000568254 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
RSRP1-217ENST00000568254 ABCA8O94911 1581 aa23.87■■□□□ 1.41
RSRP1-217ENST00000568254 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
RSRP1-217ENST00000568254 MAGI3Q5TCQ9 1506 aa23.84■■□□□ 1.41
RSRP1-217ENST00000568254 EHBP1L1Q8N3D4 1523 aa23.8■■□□□ 1.4
RSRP1-217ENST00000568254 PHLDB1Q86UU1 1377 aa23.79■■□□□ 1.4
RSRP1-217ENST00000568254 SUPT6HQ7KZ85 1726 aaKnown RBP23.78■■□□□ 1.4
RSRP1-217ENST00000568254 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
RSRP1-217ENST00000568254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
RSRP1-217ENST00000568254 HNRNPUL2Q1KMD3 747 aaKnown RBP23.77■■□□□ 1.4
RSRP1-217ENST00000568254 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
RSRP1-217ENST00000568254 NCOA2Q15596 1464 aa23.73■■□□□ 1.39
RSRP1-217ENST00000568254 ATP10BO94823 1461 aa23.72■■□□□ 1.39
RSRP1-217ENST00000568254 CDK11AQ9UQ88 783 aaPredicted RBP23.72■■□□□ 1.39
RSRP1-217ENST00000568254 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
RSRP1-217ENST00000568254 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
RSRP1-217ENST00000568254 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
RSRP1-217ENST00000568254 TROQ12816 1431 aaPredicted RBP23.64■■□□□ 1.38
RSRP1-217ENST00000568254 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
RSRP1-217ENST00000568254 UHRF1BP1LA0JNW5 1464 aa23.62■■□□□ 1.37
RSRP1-217ENST00000568254 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
RSRP1-217ENST00000568254 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
RSRP1-217ENST00000568254 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
RSRP1-217ENST00000568254 KIF14Q15058 1648 aa23.57■■□□□ 1.36
RSRP1-217ENST00000568254 FAM50AQ14320 339 aaKnown RBP23.57■■□□□ 1.36
RSRP1-217ENST00000568254 ZCCHC11Q5TAX3 1644 aaKnown RBP23.55■■□□□ 1.36
RSRP1-217ENST00000568254 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
RSRP1-217ENST00000568254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.54■■□□□ 1.36
RSRP1-217ENST00000568254 ITGAEP38570 1179 aa23.53■■□□□ 1.36
RSRP1-217ENST00000568254 PTPN23Q9H3S7 1636 aa23.53■■□□□ 1.36
RSRP1-217ENST00000568254 MIA2Q96PC5 1412 aa23.49■■□□□ 1.35
RSRP1-217ENST00000568254 ITSN2Q9NZM3 1697 aa23.46■■□□□ 1.35
RSRP1-217ENST00000568254 ABCC10Q5T3U5 1492 aa23.46■■□□□ 1.35
RSRP1-217ENST00000568254 TCOF1Q13428 1488 aaKnown RBP23.45■■□□□ 1.34
RSRP1-217ENST00000568254 CDC42BPAQ5VT25 1732 aa23.45■■□□□ 1.34
RSRP1-217ENST00000568254 GPATCH8Q9UKJ3 1502 aaKnown RBP23.44■■□□□ 1.34
RSRP1-217ENST00000568254 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
RSRP1-217ENST00000568254 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
RSRP1-217ENST00000568254 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
RSRP1-217ENST00000568254 HRCP23327 699 aa23.4■■□□□ 1.34
RSRP1-217ENST00000568254 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
RSRP1-217ENST00000568254 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
RSRP1-217ENST00000568254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.37■■□□□ 1.33
RSRP1-217ENST00000568254 ZNF644Q9H582 1327 aaPredicted RBP23.36■■□□□ 1.33
RSRP1-217ENST00000568254 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
RSRP1-217ENST00000568254 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
RSRP1-217ENST00000568254 CDC42BPBQ9Y5S2 1711 aa23.34■■□□□ 1.33
RSRP1-217ENST00000568254 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.32
RSRP1-217ENST00000568254 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
RSRP1-217ENST00000568254 PREX2Q70Z35 1606 aa23.32■■□□□ 1.32
RSRP1-217ENST00000568254 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
RSRP1-217ENST00000568254 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms