RNA–Protein interactions for RNA: ENST00000568254.5

RSRP1-217, Transcript of arginine and serine rich protein 1, humanhuman

TSL 1 (best)

Gene RSRP1, Length 2,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-217ENST00000568254 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
RSRP1-217ENST00000568254 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
RSRP1-217ENST00000568254 ZCCHC6Q5VYS8 1495 aaKnown RBP29.91■■■□□ 2.38
RSRP1-217ENST00000568254 ABCC9O60706 1549 aa29.6■■■□□ 2.33
RSRP1-217ENST00000568254 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
RSRP1-217ENST00000568254 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
RSRP1-217ENST00000568254 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
RSRP1-217ENST00000568254 NACADO15069 1562 aa29.04■■■□□ 2.24
RSRP1-217ENST00000568254 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.24
RSRP1-217ENST00000568254 RB1CC1Q8TDY2 1594 aa28.83■■■□□ 2.21
RSRP1-217ENST00000568254 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
RSRP1-217ENST00000568254 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
RSRP1-217ENST00000568254 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
RSRP1-217ENST00000568254 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.064e-9■■■□□ 17.7
RSRP1-217ENST00000568254 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
RSRP1-217ENST00000568254 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
RSRP1-217ENST00000568254 RSF1Q96T23 1441 aaPredicted RBP27.61■■■□□ 2.01
RSRP1-217ENST00000568254 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
RSRP1-217ENST00000568254 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
RSRP1-217ENST00000568254 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
RSRP1-217ENST00000568254 WIZO95785 1651 aa27.36■■□□□ 1.97
RSRP1-217ENST00000568254 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
RSRP1-217ENST00000568254 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
RSRP1-217ENST00000568254 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
RSRP1-217ENST00000568254 TOP2AP11388 1531 aaKnown RBP27.02■■□□□ 1.92
RSRP1-217ENST00000568254 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
RSRP1-217ENST00000568254 BAZ1BQ9UIG0 1483 aaKnown RBP26.85■■□□□ 1.89
RSRP1-217ENST00000568254 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
RSRP1-217ENST00000568254 CC2D2AQ9P2K1 1620 aa26.8■■□□□ 1.88
RSRP1-217ENST00000568254 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
RSRP1-217ENST00000568254 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
RSRP1-217ENST00000568254 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
RSRP1-217ENST00000568254 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
RSRP1-217ENST00000568254 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
RSRP1-217ENST00000568254 CFTRP13569 1480 aa26.18■■□□□ 1.78
RSRP1-217ENST00000568254 ABCC8Q09428 1581 aa26.17■■□□□ 1.78
RSRP1-217ENST00000568254 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
RSRP1-217ENST00000568254 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
RSRP1-217ENST00000568254 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
RSRP1-217ENST00000568254 NESP48681 1621 aa25.96■■□□□ 1.75
RSRP1-217ENST00000568254 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
RSRP1-217ENST00000568254 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
RSRP1-217ENST00000568254 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.72
RSRP1-217ENST00000568254 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
RSRP1-217ENST00000568254 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
RSRP1-217ENST00000568254 CUX1P39880 1505 aa25.77■■□□□ 1.72
RSRP1-217ENST00000568254 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
RSRP1-217ENST00000568254 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
RSRP1-217ENST00000568254 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
RSRP1-217ENST00000568254 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
RSRP1-217ENST00000568254 SOGA1O94964 1423 aa25.64■■□□□ 1.69
RSRP1-217ENST00000568254 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
RSRP1-217ENST00000568254 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
RSRP1-217ENST00000568254 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
RSRP1-217ENST00000568254 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
RSRP1-217ENST00000568254 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
RSRP1-217ENST00000568254 EEA1Q15075 1411 aa25.51■■□□□ 1.67
RSRP1-217ENST00000568254 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
RSRP1-217ENST00000568254 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
RSRP1-217ENST00000568254 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
RSRP1-217ENST00000568254 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.65
RSRP1-217ENST00000568254 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
RSRP1-217ENST00000568254 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
RSRP1-217ENST00000568254 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
RSRP1-217ENST00000568254 KIF27Q86VH2 1401 aa25.33■■□□□ 1.65
RSRP1-217ENST00000568254 CUX2O14529 1486 aa25.31■■□□□ 1.64
RSRP1-217ENST00000568254 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
RSRP1-217ENST00000568254 WDR62O43379 1518 aa25.27■■□□□ 1.64
RSRP1-217ENST00000568254 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
RSRP1-217ENST00000568254 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
RSRP1-217ENST00000568254 KIF21BO75037 1637 aa25.22■■□□□ 1.63
RSRP1-217ENST00000568254 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
RSRP1-217ENST00000568254 GOLGA3Q08378 1498 aa25.17■■□□□ 1.62
RSRP1-217ENST00000568254 IGF1RP08069 1367 aa25.14■■□□□ 1.62
RSRP1-217ENST00000568254 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
RSRP1-217ENST00000568254 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
RSRP1-217ENST00000568254 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
RSRP1-217ENST00000568254 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
RSRP1-217ENST00000568254 ABCA5Q8WWZ7 1642 aa25.09■■□□□ 1.61
RSRP1-217ENST00000568254 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.6
RSRP1-217ENST00000568254 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
RSRP1-217ENST00000568254 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
RSRP1-217ENST00000568254 GAPVD1Q14C86 1478 aa25.04■■□□□ 1.6
RSRP1-217ENST00000568254 CARMIL1Q5VZK9 1371 aa25.01■■□□□ 1.59
RSRP1-217ENST00000568254 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.593e-8■■■■■ 28.7
RSRP1-217ENST00000568254 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
RSRP1-217ENST00000568254 CUL7Q14999 1698 aa24.96■■□□□ 1.59
RSRP1-217ENST00000568254 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
RSRP1-217ENST00000568254 CEP162Q5TB80 1403 aa24.93■■□□□ 1.58
RSRP1-217ENST00000568254 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
RSRP1-217ENST00000568254 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
RSRP1-217ENST00000568254 CLIP1P30622 1438 aa24.77■■□□□ 1.56
RSRP1-217ENST00000568254 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
RSRP1-217ENST00000568254 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
RSRP1-217ENST00000568254 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
RSRP1-217ENST00000568254 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
RSRP1-217ENST00000568254 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
RSRP1-217ENST00000568254 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
RSRP1-217ENST00000568254 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.53
RSRP1-217ENST00000568254 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms