RNA–Protein interactions for RNA: ENST00000568162.5

SNUPN-210, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-210ENST00000568162 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
SNUPN-210ENST00000568162 RANGAP1P46060 587 aaPredicted RBP25.04■■□□□ 1.6
SNUPN-210ENST00000568162 SAMD9Q5K651 1589 aa25.04■■□□□ 1.6
SNUPN-210ENST00000568162 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
SNUPN-210ENST00000568162 MAP3K1Q13233 1512 aa25.01■■□□□ 1.59
SNUPN-210ENST00000568162 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
SNUPN-210ENST00000568162 APLP2Q06481 763 aa24.99■■□□□ 1.59
SNUPN-210ENST00000568162 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
SNUPN-210ENST00000568162 IQGAP2Q13576 1575 aa24.96■■□□□ 1.59
SNUPN-210ENST00000568162 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
SNUPN-210ENST00000568162 CFAP43Q8NDM7 1665 aa24.92■■□□□ 1.58
SNUPN-210ENST00000568162 HRCP23327 699 aa24.91■■□□□ 1.58
SNUPN-210ENST00000568162 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
SNUPN-210ENST00000568162 FYCO1Q9BQS8 1478 aa24.9■■□□□ 1.58
SNUPN-210ENST00000568162 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
SNUPN-210ENST00000568162 FHOD3Q2V2M9 1422 aa24.88■■□□□ 1.57
SNUPN-210ENST00000568162 FMN1Q68DA7 1419 aa24.87■■□□□ 1.57
SNUPN-210ENST00000568162 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
SNUPN-210ENST00000568162 UGGT2Q9NYU1 1516 aa24.86■■□□□ 1.57
SNUPN-210ENST00000568162 CASKIN1Q8WXD9 1431 aa24.84■■□□□ 1.57
SNUPN-210ENST00000568162 KIAA0586Q9BVV6 1533 aa24.82■■□□□ 1.56
SNUPN-210ENST00000568162 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
SNUPN-210ENST00000568162 NUP160Q12769 1436 aa24.74■■□□□ 1.55
SNUPN-210ENST00000568162 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
SNUPN-210ENST00000568162 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
SNUPN-210ENST00000568162 KIAA0556O60303 1618 aa24.72■■□□□ 1.55
SNUPN-210ENST00000568162 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
SNUPN-210ENST00000568162 KANK4Q5T7N3 995 aaPredicted RBP24.68■■□□□ 1.54
SNUPN-210ENST00000568162 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
SNUPN-210ENST00000568162 HECW1Q76N89 1606 aa24.67■■□□□ 1.54
SNUPN-210ENST00000568162 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.53
SNUPN-210ENST00000568162 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
SNUPN-210ENST00000568162 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
SNUPN-210ENST00000568162 CCDC18Q5T9S5 1454 aa24.63■■□□□ 1.53
SNUPN-210ENST00000568162 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
SNUPN-210ENST00000568162 CHD1O14646 1710 aa24.57■■□□□ 1.52
SNUPN-210ENST00000568162 EHBP1L1Q8N3D4 1523 aa24.56■■□□□ 1.52
SNUPN-210ENST00000568162 CCNB3Q8WWL7 1395 aa24.52■■□□□ 1.52
SNUPN-210ENST00000568162 RAPGEF6Q8TEU7 1601 aa24.5■■□□□ 1.51
SNUPN-210ENST00000568162 CARMIL2Q6F5E8 1435 aa24.49■■□□□ 1.51
SNUPN-210ENST00000568162 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
SNUPN-210ENST00000568162 EPRSP07814 1512 aaKnown RBP24.46■■□□□ 1.51
SNUPN-210ENST00000568162 FBLN2P98095 1184 aa24.45■■□□□ 1.5
SNUPN-210ENST00000568162 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
SNUPN-210ENST00000568162 MTUS2Q5JR59 1369 aa24.43■■□□□ 1.5
SNUPN-210ENST00000568162 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
SNUPN-210ENST00000568162 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
SNUPN-210ENST00000568162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.53e-7■■□□□ 11.7
SNUPN-210ENST00000568162 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
SNUPN-210ENST00000568162 JPH4Q96JJ6 628 aa24.38■■□□□ 1.49
SNUPN-210ENST00000568162 MAGI3Q5TCQ9 1506 aa24.38■■□□□ 1.49
SNUPN-210ENST00000568162 NUP153P49790 1475 aaKnown RBP24.38■■□□□ 1.49
SNUPN-210ENST00000568162 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
SNUPN-210ENST00000568162 NCOA2Q15596 1464 aa24.36■■□□□ 1.49
SNUPN-210ENST00000568162 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
SNUPN-210ENST00000568162 ABCA8O94911 1581 aa24.33■■□□□ 1.49
SNUPN-210ENST00000568162 FGD6Q6ZV73 1430 aa24.32■■□□□ 1.48
SNUPN-210ENST00000568162 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
SNUPN-210ENST00000568162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
SNUPN-210ENST00000568162 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
SNUPN-210ENST00000568162 MYOM3Q5VTT5 1437 aa24.3■■□□□ 1.48
SNUPN-210ENST00000568162 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
SNUPN-210ENST00000568162 PLB1Q6P1J6 1458 aa24.26■■□□□ 1.47
SNUPN-210ENST00000568162 ADCY10Q96PN6 1610 aa24.24■■□□□ 1.47
SNUPN-210ENST00000568162 PTPN23Q9H3S7 1636 aa24.22■■□□□ 1.47
SNUPN-210ENST00000568162 TCOF1Q13428 1488 aaKnown RBP24.21■■□□□ 1.47
SNUPN-210ENST00000568162 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
SNUPN-210ENST00000568162 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
SNUPN-210ENST00000568162 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
SNUPN-210ENST00000568162 PTPRGP23470 1445 aa24.15■■□□□ 1.46
SNUPN-210ENST00000568162 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
SNUPN-210ENST00000568162 FAM50AQ14320 339 aaKnown RBP24.13■■□□□ 1.45
SNUPN-210ENST00000568162 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
SNUPN-210ENST00000568162 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
SNUPN-210ENST00000568162 KIF14Q15058 1648 aa24.08■■□□□ 1.45
SNUPN-210ENST00000568162 ATP10BO94823 1461 aa24.07■■□□□ 1.44
SNUPN-210ENST00000568162 DHX57Q6P158 1386 aaKnown RBP24.07■■□□□ 1.44
SNUPN-210ENST00000568162 UACAQ9BZF9 1416 aa24.07■■□□□ 1.44
SNUPN-210ENST00000568162 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
SNUPN-210ENST00000568162 ABCC2Q92887 1545 aa24.06■■□□□ 1.44
SNUPN-210ENST00000568162 RAB3GAP2Q9H2M9 1393 aa24.04■■□□□ 1.44
SNUPN-210ENST00000568162 AKNAQ7Z591 1439 aa24.03■■□□□ 1.44
SNUPN-210ENST00000568162 ITGAEP38570 1179 aa24.03■■□□□ 1.44
SNUPN-210ENST00000568162 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
SNUPN-210ENST00000568162 HFM1A2PYH4 1435 aa24.01■■□□□ 1.43
SNUPN-210ENST00000568162 UHRF1BP1LA0JNW5 1464 aa24■■□□□ 1.43
SNUPN-210ENST00000568162 GCC2Q8IWJ2 1684 aa24■■□□□ 1.43
SNUPN-210ENST00000568162 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
SNUPN-210ENST00000568162 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
SNUPN-210ENST00000568162 PTPRKQ15262 1439 aa23.96■■□□□ 1.43
SNUPN-210ENST00000568162 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
SNUPN-210ENST00000568162 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
SNUPN-210ENST00000568162 PLEKHD1A6NEE1 506 aa23.92■■□□□ 1.42
SNUPN-210ENST00000568162 CAMSAP2Q08AD1 1489 aa23.9■■□□□ 1.42
SNUPN-210ENST00000568162 NAIPQ13075 1403 aa23.9■■□□□ 1.42
SNUPN-210ENST00000568162 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.42
SNUPN-210ENST00000568162 DAPK1P53355 1430 aa23.89■■□□□ 1.41
SNUPN-210ENST00000568162 ZCCHC11Q5TAX3 1644 aaKnown RBP23.88■■□□□ 1.41
SNUPN-210ENST00000568162 MAPKBP1O60336 1514 aa23.87■■□□□ 1.41
SNUPN-210ENST00000568162 KDM5BQ9UGL1 1544 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms