RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 FHAD1B1AJZ9 1412 aa39.19■■■■□ 3.86
LINC01003-201ENST00000564834 EIF4G3O43432 1585 aaKnown RBP39.17■■■■□ 3.86
LINC01003-201ENST00000564834 EFCAB5A4FU69 1503 aa39.08■■■■□ 3.85
LINC01003-201ENST00000564834 APLP2Q06481 763 aa39.05■■■■□ 3.84
LINC01003-201ENST00000564834 SNAPC4Q5SXM2 1469 aa38.97■■■■□ 3.83
LINC01003-201ENST00000564834 TTBK1Q5TCY1 1321 aaPredicted RBP38.95■■■■□ 3.83
LINC01003-201ENST00000564834 MAGI1Q96QZ7 1491 aaPredicted RBP38.92■■■■□ 3.82
LINC01003-201ENST00000564834 SAMD9Q5K651 1589 aa38.9■■■■□ 3.82
LINC01003-201ENST00000564834 IQGAP2Q13576 1575 aa38.83■■■■□ 3.81
LINC01003-201ENST00000564834 FHOD3Q2V2M9 1422 aa38.83■■■■□ 3.81
LINC01003-201ENST00000564834 GRIN2AQ12879 1464 aa38.8■■■■□ 3.8
LINC01003-201ENST00000564834 HRCP23327 699 aa38.78■■■■□ 3.8
LINC01003-201ENST00000564834 MAP3K1Q13233 1512 aa38.77■■■■□ 3.8
LINC01003-201ENST00000564834 P3H3Q8IVL6 736 aa38.77■■■■□ 3.8
LINC01003-201ENST00000564834 SYNJ2O15056 1496 aa38.76■■■■□ 3.79
LINC01003-201ENST00000564834 PCF11O94913 1555 aaKnown RBP38.76■■■■□ 3.79
LINC01003-201ENST00000564834 FMN1Q68DA7 1419 aa38.72■■■■□ 3.79
LINC01003-201ENST00000564834 TIAM1Q13009 1591 aa38.7■■■■□ 3.79
LINC01003-201ENST00000564834 FYCO1Q9BQS8 1478 aa38.7■■■■□ 3.79
LINC01003-201ENST00000564834 KIAA0586Q9BVV6 1533 aa38.68■■■■□ 3.78
LINC01003-201ENST00000564834 CASKIN1Q8WXD9 1431 aa38.66■■■■□ 3.78
LINC01003-201ENST00000564834 KANK4Q5T7N3 995 aaPredicted RBP38.65■■■■□ 3.78
LINC01003-201ENST00000564834 CFAP43Q8NDM7 1665 aa38.64■■■■□ 3.78
LINC01003-201ENST00000564834 UGGT2Q9NYU1 1516 aa38.64■■■■□ 3.78
LINC01003-201ENST00000564834 CHMP7Q8WUX9 453 aaPredicted RBP38.6■■■■□ 3.77
LINC01003-201ENST00000564834 CEP170Q5SW79 1584 aa38.56■■■■□ 3.76
LINC01003-201ENST00000564834 NUP160Q12769 1436 aa38.5■■■■□ 3.75
LINC01003-201ENST00000564834 LRRC9Q6ZRR7 1453 aa38.5■■■■□ 3.75
LINC01003-201ENST00000564834 FBLN2P98095 1184 aa38.44■■■■□ 3.74
LINC01003-201ENST00000564834 KIAA0556O60303 1618 aa38.43■■■■□ 3.74
LINC01003-201ENST00000564834 DISP1Q96F81 1524 aa38.41■■■■□ 3.74
LINC01003-201ENST00000564834 ATP1B4Q9UN42 357 aaPredicted RBP38.4■■■■□ 3.74
LINC01003-201ENST00000564834 LRRIQ1Q96JM4 1722 aa38.38■■■■□ 3.73
LINC01003-201ENST00000564834 RRBP1Q9P2E9 1410 aaKnown RBP38.36■■■■□ 3.73
LINC01003-201ENST00000564834 HECW1Q76N89 1606 aa38.31■■■■□ 3.72
LINC01003-201ENST00000564834 CHD1O14646 1710 aa38.3■■■■□ 3.72
LINC01003-201ENST00000564834 CCDC18Q5T9S5 1454 aa38.25■■■■□ 3.71
LINC01003-201ENST00000564834 ZEB1P37275 1124 aaPredicted RBP38.21■■■■□ 3.71
LINC01003-201ENST00000564834 CCNB3Q8WWL7 1395 aa38.2■■■■□ 3.71
LINC01003-201ENST00000564834 JPH4Q96JJ6 628 aa38.18■■■■□ 3.7
LINC01003-201ENST00000564834 CARMIL2Q6F5E8 1435 aa38.17■■■■□ 3.7
LINC01003-201ENST00000564834 HNRNPUL2Q1KMD3 747 aaKnown RBP38.16■■■■□ 3.7
LINC01003-201ENST00000564834 PHLDB1Q86UU1 1377 aa38.14■■■■□ 3.7
LINC01003-201ENST00000564834 MTUS2Q5JR59 1369 aa38.13■■■■□ 3.69
LINC01003-201ENST00000564834 EPRSP07814 1512 aaKnown RBP38.12■■■■□ 3.69
LINC01003-201ENST00000564834 EHBP1L1Q8N3D4 1523 aa38.12■■■■□ 3.69
LINC01003-201ENST00000564834 RAPGEF6Q8TEU7 1601 aa38.1■■■■□ 3.69
LINC01003-201ENST00000564834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.09■■■■□ 3.69
LINC01003-201ENST00000564834 SUPT6HQ7KZ85 1726 aaKnown RBP38.05■■■■□ 3.68
LINC01003-201ENST00000564834 CCER1Q8TC90 406 aaPredicted RBP38.01■■■■□ 3.68
LINC01003-201ENST00000564834 CDK13Q14004 1512 aaKnown RBP38■■■■□ 3.67
LINC01003-201ENST00000564834 MAGI3Q5TCQ9 1506 aa38■■■■□ 3.67
LINC01003-201ENST00000564834 NUP153P49790 1475 aaKnown RBP37.99■■■■□ 3.67
LINC01003-201ENST00000564834 SHROOM2Q13796 1616 aa37.97■■■■□ 3.67
LINC01003-201ENST00000564834 NCOA2Q15596 1464 aa37.95■■■■□ 3.67
LINC01003-201ENST00000564834 PRG4Q92954 1404 aaPredicted RBP37.92■■■■□ 3.66
LINC01003-201ENST00000564834 ARHGEF11O15085 1522 aa37.92■■■■□ 3.66
LINC01003-201ENST00000564834 PLB1Q6P1J6 1458 aa37.89■■■■□ 3.66
LINC01003-201ENST00000564834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.89■■■■□ 3.668e-19■■■■■ 29.7
LINC01003-201ENST00000564834 FGD6Q6ZV73 1430 aa37.87■■■■□ 3.65
LINC01003-201ENST00000564834 ABCA8O94911 1581 aa37.84■■■■□ 3.65
LINC01003-201ENST00000564834 MYOM3Q5VTT5 1437 aa37.84■■■■□ 3.65
LINC01003-201ENST00000564834 CLASP1Q7Z460 1538 aa37.82■■■■□ 3.65
LINC01003-201ENST00000564834 ARID3CA6NKF2 412 aa37.78■■■■□ 3.64
LINC01003-201ENST00000564834 FAM50AQ14320 339 aaKnown RBP37.78■■■■□ 3.64
LINC01003-201ENST00000564834 CDK11AQ9UQ88 783 aaPredicted RBP37.74■■■■□ 3.63
LINC01003-201ENST00000564834 PTPRGP23470 1445 aa37.73■■■■□ 3.63
LINC01003-201ENST00000564834 ITGAEP38570 1179 aa37.72■■■■□ 3.63
LINC01003-201ENST00000564834 PTPN23Q9H3S7 1636 aa37.67■■■■□ 3.62
LINC01003-201ENST00000564834 TROQ12816 1431 aaPredicted RBP37.64■■■■□ 3.62
LINC01003-201ENST00000564834 ERCC6L2Q5T890 1561 aa37.62■■■■□ 3.61
LINC01003-201ENST00000564834 ADCY10Q96PN6 1610 aa37.61■■■■□ 3.61
LINC01003-201ENST00000564834 MIA2Q96PC5 1412 aa37.6■■■■□ 3.61
LINC01003-201ENST00000564834 TCOF1Q13428 1488 aaKnown RBP37.6■■■■□ 3.61
LINC01003-201ENST00000564834 ATP10BO94823 1461 aa37.58■■■■□ 3.61
LINC01003-201ENST00000564834 UACAQ9BZF9 1416 aa37.53■■■■□ 3.6
LINC01003-201ENST00000564834 SETD5Q9C0A6 1442 aa37.53■■■■□ 3.6
LINC01003-201ENST00000564834 RAB3GAP2Q9H2M9 1393 aa37.51■■■■□ 3.59
LINC01003-201ENST00000564834 DHX57Q6P158 1386 aaKnown RBP37.5■■■■□ 3.59
LINC01003-201ENST00000564834 KIF14Q15058 1648 aa37.47■■■■□ 3.59
LINC01003-201ENST00000564834 ITSN2Q9NZM3 1697 aa37.46■■■■□ 3.59
LINC01003-201ENST00000564834 CLSPNQ9HAW4 1339 aa37.46■■■■□ 3.59
LINC01003-201ENST00000564834 ABCC2Q92887 1545 aa37.44■■■■□ 3.58
LINC01003-201ENST00000564834 PLEKHD1A6NEE1 506 aa37.42■■■■□ 3.58
LINC01003-201ENST00000564834 PTPRKQ15262 1439 aa37.42■■■■□ 3.58
LINC01003-201ENST00000564834 HFM1A2PYH4 1435 aa37.35■■■■□ 3.57
LINC01003-201ENST00000564834 GPATCH8Q9UKJ3 1502 aaKnown RBP37.33■■■■□ 3.57
LINC01003-201ENST00000564834 UHRF1BP1LA0JNW5 1464 aa37.32■■■■□ 3.56
LINC01003-201ENST00000564834 ABCC10Q5T3U5 1492 aa37.3■■■■□ 3.56
LINC01003-201ENST00000564834 CDC42BPAQ5VT25 1732 aa37.29■■■■□ 3.56
LINC01003-201ENST00000564834 DNMT1P26358 1616 aaKnown RBP37.27■■■■□ 3.56
LINC01003-201ENST00000564834 AKNAQ7Z591 1439 aa37.24■■■■□ 3.55
LINC01003-201ENST00000564834 OSCARQ8IYS5 282 aa37.24■■■■□ 3.55
LINC01003-201ENST00000564834 NAIPQ13075 1403 aa37.23■■■■□ 3.55
LINC01003-201ENST00000564834 GCC2Q8IWJ2 1684 aa37.22■■■■□ 3.55
LINC01003-201ENST00000564834 CAMSAP2Q08AD1 1489 aa37.22■■■■□ 3.55
LINC01003-201ENST00000564834 CFDP1Q9UEE9 299 aaPredicted RBP37.22■■■■□ 3.55
LINC01003-201ENST00000564834 DAPK1P53355 1430 aa37.2■■■■□ 3.55
LINC01003-201ENST00000564834 ZCCHC11Q5TAX3 1644 aaKnown RBP37.19■■■■□ 3.54
LINC01003-201ENST00000564834 KDM5BQ9UGL1 1544 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms