RNA–Protein interactions for RNA: ENST00000562100.5

PDPR-204, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 5

Gene PDPR, Length 1,643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-204	ENST00000562100	MAGI1	Q96QZ7	1491 aa	Predicted RBP	14.03	□□□□□ -0.16
PDPR-204	ENST00000562100	ARHGAP35	Q9NRY4	1499 aa		14.03	□□□□□ -0.16
PDPR-204	ENST00000562100	DNAJC5	Q9H3Z4	198 aa		14.02	□□□□□ -0.16
PDPR-204	ENST00000562100	SNAPC4	Q5SXM2	1469 aa		14.02	□□□□□ -0.17
PDPR-204	ENST00000562100	PPARGC1B	Q86YN6	1023 aa	Known RBP	14.01	□□□□□ -0.17
PDPR-204	ENST00000562100	EFCAB5	A4FU69	1503 aa		14	□□□□□ -0.17
PDPR-204	ENST00000562100	APLP2	Q06481	763 aa		13.99	□□□□□ -0.17
PDPR-204	ENST00000562100	ADAMTS12	P58397	1594 aa		13.98	□□□□□ -0.17
PDPR-204	ENST00000562100	SYNJ2	O15056	1496 aa		13.96	□□□□□ -0.17
PDPR-204	ENST00000562100	MAP3K1	Q13233	1512 aa		13.96	□□□□□ -0.17
PDPR-204	ENST00000562100	CFAP43	Q8NDM7	1665 aa		13.95	□□□□□ -0.18
PDPR-204	ENST00000562100	FHAD1	B1AJZ9	1412 aa		13.91	□□□□□ -0.18
PDPR-204	ENST00000562100	TIAM1	Q13009	1591 aa		13.9	□□□□□ -0.18
PDPR-204	ENST00000562100	OSCAR	Q8IYS5	282 aa		13.9	□□□□□ -0.18
PDPR-204	ENST00000562100	CLASP1	Q7Z460	1538 aa		13.9	□□□□□ -0.18
PDPR-204	ENST00000562100	SAMD9	Q5K651	1589 aa		13.9	□□□□□ -0.18
PDPR-204	ENST00000562100	RANGAP1	P46060	587 aa	Predicted RBP	13.89	□□□□□ -0.19
PDPR-204	ENST00000562100	GRIN2A	Q12879	1464 aa		13.88	□□□□□ -0.19
PDPR-204	ENST00000562100	PCF11	O94913	1555 aa	Known RBP	13.88	□□□□□ -0.19
PDPR-204	ENST00000562100	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.85	□□□□□ -0.19
PDPR-204	ENST00000562100	FYCO1	Q9BQS8	1478 aa		13.85	□□□□□ -0.19
PDPR-204	ENST00000562100	CEP170	Q5SW79	1584 aa		13.84	□□□□□ -0.19
PDPR-204	ENST00000562100	NUP160	Q12769	1436 aa		13.84	□□□□□ -0.19
PDPR-204	ENST00000562100	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.82	□□□□□ -0.2
PDPR-204	ENST00000562100	RRBP1	Q9P2E9	1410 aa	Known RBP	13.81	□□□□□ -0.2
PDPR-204	ENST00000562100	RIMBP3C	A6NJZ7	1639 aa		13.81	□□□□□ -0.2
PDPR-204	ENST00000562100	RIMBP3B	A6NNM3	1639 aa		13.81	□□□□□ -0.2
PDPR-204	ENST00000562100	RIMBP3	Q9UFD9	1639 aa		13.81	□□□□□ -0.2
PDPR-204	ENST00000562100	FMN1	Q68DA7	1419 aa		13.8	□□□□□ -0.2
PDPR-204	ENST00000562100	CASKIN1	Q8WXD9	1431 aa		13.8	□□□□□ -0.2
PDPR-204	ENST00000562100	FBLN2	P98095	1184 aa		13.8	□□□□□ -0.2
PDPR-204	ENST00000562100	IQGAP2	Q13576	1575 aa		13.8	□□□□□ -0.2
PDPR-204	ENST00000562100	ARHGEF11	O15085	1522 aa		13.8	□□□□□ -0.2
PDPR-204	ENST00000562100	SHROOM2	Q13796	1616 aa		13.78	□□□□□ -0.2
PDPR-204	ENST00000562100	CCER1	Q8TC90	406 aa	Predicted RBP	13.78	□□□□□ -0.2
PDPR-204	ENST00000562100	LRRC9	Q6ZRR7	1453 aa		13.77	□□□□□ -0.2
PDPR-204	ENST00000562100	FHOD3	Q2V2M9	1422 aa		13.77	□□□□□ -0.2
PDPR-204	ENST00000562100	LRRIQ1	Q96JM4	1722 aa		13.77	□□□□□ -0.21
PDPR-204	ENST00000562100	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.75	□□□□□ -0.21
PDPR-204	ENST00000562100	KANK4	Q5T7N3	995 aa	Predicted RBP	13.75	□□□□□ -0.21
PDPR-204	ENST00000562100	UGGT2	Q9NYU1	1516 aa		13.72	□□□□□ -0.21
PDPR-204	ENST00000562100	CCNB3	Q8WWL7	1395 aa		13.71	□□□□□ -0.22
PDPR-204	ENST00000562100	HECW1	Q76N89	1606 aa		13.7	□□□□□ -0.22
PDPR-204	ENST00000562100	KIAA0586	Q9BVV6	1533 aa		13.68	□□□□□ -0.22
PDPR-204	ENST00000562100	ERCC6L2	Q5T890	1561 aa		13.68	□□□□□ -0.22
PDPR-204	ENST00000562100	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.67	□□□□□ -0.22
PDPR-204	ENST00000562100	CCDC18	Q5T9S5	1454 aa		13.67	□□□□□ -0.22
PDPR-204	ENST00000562100	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.67	□□□□□ -0.22
PDPR-204	ENST00000562100	EHBP1L1	Q8N3D4	1523 aa		13.66	□□□□□ -0.22
PDPR-204	ENST00000562100	KIAA0556	O60303	1618 aa		13.65	□□□□□ -0.22
PDPR-204	ENST00000562100	P3H3	Q8IVL6	736 aa		13.64	□□□□□ -0.23
PDPR-204	ENST00000562100	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PDPR-204	ENST00000562100	CLSPN	Q9HAW4	1339 aa		13.62	□□□□□ -0.23
PDPR-204	ENST00000562100	PHLDB1	Q86UU1	1377 aa		13.6	□□□□□ -0.23
PDPR-204	ENST00000562100	PRG4	Q92954	1404 aa	Predicted RBP	13.59	□□□□□ -0.23
PDPR-204	ENST00000562100	RAPGEF6	Q8TEU7	1601 aa		13.57	□□□□□ -0.24
PDPR-204	ENST00000562100	JPH4	Q96JJ6	628 aa		13.57	□□□□□ -0.24
PDPR-204	ENST00000562100	DISP1	Q96F81	1524 aa		13.57	□□□□□ -0.24
PDPR-204	ENST00000562100	MTUS2	Q5JR59	1369 aa		13.57	□□□□□ -0.24
PDPR-204	ENST00000562100	EPRS	P07814	1512 aa	Known RBP	13.55	□□□□□ -0.24
PDPR-204	ENST00000562100	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.55	□□□□□ -0.24
PDPR-204	ENST00000562100	FGD6	Q6ZV73	1430 aa		13.55	□□□□□ -0.24
PDPR-204	ENST00000562100	NCOA2	Q15596	1464 aa		13.54	□□□□□ -0.24
PDPR-204	ENST00000562100	DHX57	Q6P158	1386 aa	Known RBP	13.53	□□□□□ -0.24
PDPR-204	ENST00000562100	MYOM3	Q5VTT5	1437 aa		13.52	□□□□□ -0.24
PDPR-204	ENST00000562100	MAGI3	Q5TCQ9	1506 aa		13.52	□□□□□ -0.25
PDPR-204	ENST00000562100	PTPN23	Q9H3S7	1636 aa		13.52	□□□□□ -0.25
PDPR-204	ENST00000562100	CYB5RL	Q6IPT4	315 aa		13.51	□□□□□ -0.25
PDPR-204	ENST00000562100	SETD5	Q9C0A6	1442 aa		13.5	□□□□□ -0.25
PDPR-204	ENST00000562100	CARMIL2	Q6F5E8	1435 aa		13.49	□□□□□ -0.25
PDPR-204	ENST00000562100	CDK13	Q14004	1512 aa	Known RBP	13.48	□□□□□ -0.25
PDPR-204	ENST00000562100	TCOF1	Q13428	1488 aa	Known RBP	13.48	□□□□□ -0.25
PDPR-204	ENST00000562100	ADCY10	Q96PN6	1610 aa		13.48	□□□□□ -0.25
PDPR-204	ENST00000562100	GCC2	Q8IWJ2	1684 aa		13.47	□□□□□ -0.25
PDPR-204	ENST00000562100	ITSN2	Q9NZM3	1697 aa		13.47	□□□□□ -0.25
PDPR-204	ENST00000562100	RAB3GAP2	Q9H2M9	1393 aa		13.47	□□□□□ -0.25
PDPR-204	ENST00000562100	NUP153	P49790	1475 aa	Known RBP	13.46	□□□□□ -0.26
PDPR-204	ENST00000562100	FAM50A	Q14320	339 aa	Known RBP	13.45	□□□□□ -0.26
PDPR-204	ENST00000562100	MIA2	Q96PC5	1412 aa		13.44	□□□□□ -0.26
PDPR-204	ENST00000562100	ABCA8	O94911	1581 aa		13.42	□□□□□ -0.26
PDPR-204	ENST00000562100	MAPKBP1	O60336	1514 aa		13.42	□□□□□ -0.26
PDPR-204	ENST00000562100	ITGAE	P38570	1179 aa		13.41	□□□□□ -0.26
PDPR-204	ENST00000562100	PTPRG	P23470	1445 aa		13.41	□□□□□ -0.26
PDPR-204	ENST00000562100	UHRF1BP1L	A0JNW5	1464 aa		13.4	□□□□□ -0.26
PDPR-204	ENST00000562100	HFM1	A2PYH4	1435 aa		13.4	□□□□□ -0.26
PDPR-204	ENST00000562100	AKNA	Q7Z591	1439 aa		13.4	□□□□□ -0.26
PDPR-204	ENST00000562100	ABCC2	Q92887	1545 aa		13.39	□□□□□ -0.27
PDPR-204	ENST00000562100	DNMT1	P26358	1616 aa	Known RBP	13.38	□□□□□ -0.27
PDPR-204	ENST00000562100	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.37	□□□□□ -0.27
PDPR-204	ENST00000562100	TRO	Q12816	1431 aa	Predicted RBP	13.37	□□□□□ -0.27
PDPR-204	ENST00000562100	ADGB	Q8N7X0	1667 aa		13.37	□□□□□ -0.27
PDPR-204	ENST00000562100	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.36	□□□□□ -0.27
PDPR-204	ENST00000562100	UACA	Q9BZF9	1416 aa		13.36	□□□□□ -0.27
PDPR-204	ENST00000562100	PLB1	Q6P1J6	1458 aa		13.35	□□□□□ -0.27
PDPR-204	ENST00000562100	CROCC2	H7BZ55	1655 aa		13.35	□□□□□ -0.27
PDPR-204	ENST00000562100	KIF14	Q15058	1648 aa		13.35	□□□□□ -0.27
PDPR-204	ENST00000562100	PTPRK	Q15262	1439 aa		13.34	□□□□□ -0.27
PDPR-204	ENST00000562100	CDC42BPA	Q5VT25	1732 aa		13.34	□□□□□ -0.27
PDPR-204	ENST00000562100	KDM5B	Q9UGL1	1544 aa		13.34	□□□□□ -0.27
PDPR-204	ENST00000562100	NAIP	Q13075	1403 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms