RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
SNRPA1-211ENST00000560433 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-211ENST00000560433 FBLN2P98095 1184 aa16.84■□□□□ 0.29
SNRPA1-211ENST00000560433 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
SNRPA1-211ENST00000560433 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
SNRPA1-211ENST00000560433 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
SNRPA1-211ENST00000560433 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-211ENST00000560433 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
SNRPA1-211ENST00000560433 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
SNRPA1-211ENST00000560433 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-211ENST00000560433 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-211ENST00000560433 HRCP23327 699 aa16.69■□□□□ 0.26
SNRPA1-211ENST00000560433 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
SNRPA1-211ENST00000560433 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-211ENST00000560433 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-211ENST00000560433 IQGAP2Q13576 1575 aa16.67■□□□□ 0.26
SNRPA1-211ENST00000560433 EFCAB5A4FU69 1503 aa16.66■□□□□ 0.26
SNRPA1-211ENST00000560433 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
SNRPA1-211ENST00000560433 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-211ENST00000560433 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
SNRPA1-211ENST00000560433 ARID3CA6NKF2 412 aa16.64■□□□□ 0.25
SNRPA1-211ENST00000560433 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
SNRPA1-211ENST00000560433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-211ENST00000560433 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
SNRPA1-211ENST00000560433 TIAM1Q13009 1591 aa16.59■□□□□ 0.25
SNRPA1-211ENST00000560433 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
SNRPA1-211ENST00000560433 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
SNRPA1-211ENST00000560433 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
SNRPA1-211ENST00000560433 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
SNRPA1-211ENST00000560433 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
SNRPA1-211ENST00000560433 DISP1Q96F81 1524 aa16.54■□□□□ 0.24
SNRPA1-211ENST00000560433 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
SNRPA1-211ENST00000560433 ITGAEP38570 1179 aa16.53■□□□□ 0.24
SNRPA1-211ENST00000560433 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
SNRPA1-211ENST00000560433 NUP160Q12769 1436 aa16.52■□□□□ 0.23
SNRPA1-211ENST00000560433 CHD1O14646 1710 aa16.5■□□□□ 0.23
SNRPA1-211ENST00000560433 KIAA0556O60303 1618 aa16.5■□□□□ 0.23
SNRPA1-211ENST00000560433 CFAP43Q8NDM7 1665 aa16.49■□□□□ 0.23
SNRPA1-211ENST00000560433 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
SNRPA1-211ENST00000560433 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
SNRPA1-211ENST00000560433 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-211ENST00000560433 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
SNRPA1-211ENST00000560433 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-211ENST00000560433 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-211ENST00000560433 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
SNRPA1-211ENST00000560433 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-211ENST00000560433 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
SNRPA1-211ENST00000560433 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
SNRPA1-211ENST00000560433 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-211ENST00000560433 CARMIL2Q6F5E8 1435 aa16.4■□□□□ 0.22
SNRPA1-211ENST00000560433 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-211ENST00000560433 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
SNRPA1-211ENST00000560433 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-211ENST00000560433 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
SNRPA1-211ENST00000560433 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
SNRPA1-211ENST00000560433 NCOA2Q15596 1464 aa16.33■□□□□ 0.21
SNRPA1-211ENST00000560433 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
SNRPA1-211ENST00000560433 EHBP1L1Q8N3D4 1523 aa16.3■□□□□ 0.2
SNRPA1-211ENST00000560433 ZEB1P37275 1124 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-211ENST00000560433 PTPRGP23470 1445 aa16.29■□□□□ 0.2
SNRPA1-211ENST00000560433 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-211ENST00000560433 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
SNRPA1-211ENST00000560433 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
SNRPA1-211ENST00000560433 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
SNRPA1-211ENST00000560433 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-211ENST00000560433 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
SNRPA1-211ENST00000560433 ABCA8O94911 1581 aa16.22■□□□□ 0.19
SNRPA1-211ENST00000560433 ATP10BO94823 1461 aa16.21■□□□□ 0.19
SNRPA1-211ENST00000560433 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
SNRPA1-211ENST00000560433 CHIC2Q9UKJ5 165 aa16.2■□□□□ 0.18
SNRPA1-211ENST00000560433 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-211ENST00000560433 PLEKHD1A6NEE1 506 aa16.19■□□□□ 0.18
SNRPA1-211ENST00000560433 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
SNRPA1-211ENST00000560433 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
SNRPA1-211ENST00000560433 PTPN23Q9H3S7 1636 aa16.18■□□□□ 0.18
SNRPA1-211ENST00000560433 KIF14Q15058 1648 aa16.17■□□□□ 0.18
SNRPA1-211ENST00000560433 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-211ENST00000560433 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
SNRPA1-211ENST00000560433 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-211ENST00000560433 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
SNRPA1-211ENST00000560433 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-211ENST00000560433 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.17
SNRPA1-211ENST00000560433 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
SNRPA1-211ENST00000560433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNRPA1-211ENST00000560433 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
SNRPA1-211ENST00000560433 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-211ENST00000560433 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
SNRPA1-211ENST00000560433 GPATCH8Q9UKJ3 1502 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-211ENST00000560433 MIA2Q96PC5 1412 aa16.07■□□□□ 0.16
SNRPA1-211ENST00000560433 ABCC2Q92887 1545 aa16.07■□□□□ 0.16
SNRPA1-211ENST00000560433 TCOF1Q13428 1488 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-211ENST00000560433 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
SNRPA1-211ENST00000560433 ABCC10Q5T3U5 1492 aa16.02■□□□□ 0.16
SNRPA1-211ENST00000560433 NAIPQ13075 1403 aa16.02■□□□□ 0.15
SNRPA1-211ENST00000560433 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
SNRPA1-211ENST00000560433 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
SNRPA1-211ENST00000560433 CDC42BPAQ5VT25 1732 aa16.01■□□□□ 0.15
SNRPA1-211ENST00000560433 ABCC5O15440 1437 aa16■□□□□ 0.15
SNRPA1-211ENST00000560433 DAPK1P53355 1430 aa16■□□□□ 0.15
SNRPA1-211ENST00000560433 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms