RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
TPM1-215ENST00000558868 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
TPM1-215ENST00000558868 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
TPM1-215ENST00000558868 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
TPM1-215ENST00000558868 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
TPM1-215ENST00000558868 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
TPM1-215ENST00000558868 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
TPM1-215ENST00000558868 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
TPM1-215ENST00000558868 APLP2Q06481 763 aa21.43■■□□□ 1.02
TPM1-215ENST00000558868 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
TPM1-215ENST00000558868 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
TPM1-215ENST00000558868 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
TPM1-215ENST00000558868 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
TPM1-215ENST00000558868 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
TPM1-215ENST00000558868 GRIN2AQ12879 1464 aa21.37■■□□□ 1.01
TPM1-215ENST00000558868 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
TPM1-215ENST00000558868 IQGAP2Q13576 1575 aa21.33■■□□□ 1.01
TPM1-215ENST00000558868 KIAA0586Q9BVV6 1533 aa21.31■■□□□ 1
TPM1-215ENST00000558868 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
TPM1-215ENST00000558868 SAMD9Q5K651 1589 aa21.31■■□□□ 1
TPM1-215ENST00000558868 ARHGEF11O15085 1522 aa21.28■■□□□ 1
TPM1-215ENST00000558868 FMN1Q68DA7 1419 aa21.27■■□□□ 1
TPM1-215ENST00000558868 FHOD3Q2V2M9 1422 aa21.26■□□□□ 0.99
TPM1-215ENST00000558868 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
TPM1-215ENST00000558868 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
TPM1-215ENST00000558868 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
TPM1-215ENST00000558868 FBLN2P98095 1184 aa21.23■□□□□ 0.99
TPM1-215ENST00000558868 NUP160Q12769 1436 aa21.21■□□□□ 0.99
TPM1-215ENST00000558868 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
TPM1-215ENST00000558868 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
TPM1-215ENST00000558868 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
TPM1-215ENST00000558868 PCF11O94913 1555 aaKnown RBP21.16■□□□□ 0.98
TPM1-215ENST00000558868 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
TPM1-215ENST00000558868 TIAM1Q13009 1591 aa21.14■□□□□ 0.97
TPM1-215ENST00000558868 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
TPM1-215ENST00000558868 KIAA0556O60303 1618 aa21.1■□□□□ 0.97
TPM1-215ENST00000558868 CFAP43Q8NDM7 1665 aa21.09■□□□□ 0.97
TPM1-215ENST00000558868 CARMIL2Q6F5E8 1435 aa21.08■□□□□ 0.97
TPM1-215ENST00000558868 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
TPM1-215ENST00000558868 DISP1Q96F81 1524 aa21.08■□□□□ 0.96
TPM1-215ENST00000558868 CHD1O14646 1710 aa21.07■□□□□ 0.96
TPM1-215ENST00000558868 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
TPM1-215ENST00000558868 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
TPM1-215ENST00000558868 LRRC9Q6ZRR7 1453 aa21.04■□□□□ 0.96
TPM1-215ENST00000558868 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
TPM1-215ENST00000558868 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
TPM1-215ENST00000558868 MTUS2Q5JR59 1369 aa20.92■□□□□ 0.94
TPM1-215ENST00000558868 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
TPM1-215ENST00000558868 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
TPM1-215ENST00000558868 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
TPM1-215ENST00000558868 PRG4Q92954 1404 aaPredicted RBP20.91■□□□□ 0.94
TPM1-215ENST00000558868 EPRSP07814 1512 aaKnown RBP20.9■□□□□ 0.94
TPM1-215ENST00000558868 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
TPM1-215ENST00000558868 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
TPM1-215ENST00000558868 HRCP23327 699 aa20.87■□□□□ 0.93
TPM1-215ENST00000558868 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
TPM1-215ENST00000558868 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
TPM1-215ENST00000558868 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.93
TPM1-215ENST00000558868 CDK11AQ9UQ88 783 aaPredicted RBP20.83■□□□□ 0.93
TPM1-215ENST00000558868 SUPT6HQ7KZ85 1726 aaKnown RBP20.83■□□□□ 0.92
TPM1-215ENST00000558868 PTPRGP23470 1445 aa20.82■□□□□ 0.92
TPM1-215ENST00000558868 PHLDB1Q86UU1 1377 aa20.8■□□□□ 0.92
TPM1-215ENST00000558868 ABCA8O94911 1581 aa20.8■□□□□ 0.92
TPM1-215ENST00000558868 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
TPM1-215ENST00000558868 PLB1Q6P1J6 1458 aa20.79■□□□□ 0.92
TPM1-215ENST00000558868 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
TPM1-215ENST00000558868 HNRNPUL2Q1KMD3 747 aaKnown RBP20.77■□□□□ 0.92
TPM1-215ENST00000558868 NCOA2Q15596 1464 aa20.76■□□□□ 0.91
TPM1-215ENST00000558868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.91
TPM1-215ENST00000558868 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
TPM1-215ENST00000558868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
TPM1-215ENST00000558868 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
TPM1-215ENST00000558868 FGD6Q6ZV73 1430 aa20.7■□□□□ 0.9
TPM1-215ENST00000558868 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
TPM1-215ENST00000558868 ARID3CA6NKF2 412 aa20.69■□□□□ 0.9
TPM1-215ENST00000558868 TROQ12816 1431 aaPredicted RBP20.69■□□□□ 0.9
TPM1-215ENST00000558868 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
TPM1-215ENST00000558868 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
TPM1-215ENST00000558868 ATP10BO94823 1461 aa20.65■□□□□ 0.9
TPM1-215ENST00000558868 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
TPM1-215ENST00000558868 MIA2Q96PC5 1412 aa20.64■□□□□ 0.89
TPM1-215ENST00000558868 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
TPM1-215ENST00000558868 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
TPM1-215ENST00000558868 ADCY10Q96PN6 1610 aa20.62■□□□□ 0.89
TPM1-215ENST00000558868 UHRF1BP1LA0JNW5 1464 aa20.61■□□□□ 0.89
TPM1-215ENST00000558868 TCOF1Q13428 1488 aaKnown RBP20.59■□□□□ 0.89
TPM1-215ENST00000558868 PTPN23Q9H3S7 1636 aa20.59■□□□□ 0.89
TPM1-215ENST00000558868 ITGAEP38570 1179 aa20.58■□□□□ 0.89
TPM1-215ENST00000558868 KIF14Q15058 1648 aa20.55■□□□□ 0.88
TPM1-215ENST00000558868 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
TPM1-215ENST00000558868 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
TPM1-215ENST00000558868 KDM5BQ9UGL1 1544 aa20.49■□□□□ 0.87
TPM1-215ENST00000558868 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
TPM1-215ENST00000558868 ABCC10Q5T3U5 1492 aa20.47■□□□□ 0.87
TPM1-215ENST00000558868 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
TPM1-215ENST00000558868 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
TPM1-215ENST00000558868 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
TPM1-215ENST00000558868 RAB3GAP2Q9H2M9 1393 aa20.43■□□□□ 0.86
TPM1-215ENST00000558868 HFM1A2PYH4 1435 aa20.4■□□□□ 0.86
TPM1-215ENST00000558868 AKNAQ7Z591 1439 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms