RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
SDR39U1-220ENST00000556548 THOC2Q8NI27 1593 aaKnown RBP28.01■■■□□ 2.07
SDR39U1-220ENST00000556548 CTTNBP2Q8WZ74 1663 aa27.99■■■□□ 2.07
SDR39U1-220ENST00000556548 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
SDR39U1-220ENST00000556548 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
SDR39U1-220ENST00000556548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.95■■■□□ 2.07
SDR39U1-220ENST00000556548 FHAD1B1AJZ9 1412 aa27.94■■■□□ 2.06
SDR39U1-220ENST00000556548 ATP1B4Q9UN42 357 aaPredicted RBP27.93■■■□□ 2.06
SDR39U1-220ENST00000556548 ADAMTS12P58397 1594 aa27.89■■■□□ 2.06
SDR39U1-220ENST00000556548 HNRNPUL2Q1KMD3 747 aaKnown RBP27.89■■■□□ 2.05
SDR39U1-220ENST00000556548 EFCAB5A4FU69 1503 aa27.86■■■□□ 2.05
SDR39U1-220ENST00000556548 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
SDR39U1-220ENST00000556548 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
SDR39U1-220ENST00000556548 CCER1Q8TC90 406 aaPredicted RBP27.82■■■□□ 2.04
SDR39U1-220ENST00000556548 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-220ENST00000556548 PCF11O94913 1555 aaKnown RBP27.8■■■□□ 2.04
SDR39U1-220ENST00000556548 TIAM1Q13009 1591 aa27.76■■■□□ 2.03
SDR39U1-220ENST00000556548 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
SDR39U1-220ENST00000556548 FBLN2P98095 1184 aa27.72■■■□□ 2.03
SDR39U1-220ENST00000556548 FMN1Q68DA7 1419 aa27.7■■■□□ 2.03
SDR39U1-220ENST00000556548 CASKIN1Q8WXD9 1431 aa27.7■■■□□ 2.02
SDR39U1-220ENST00000556548 IQGAP2Q13576 1575 aa27.69■■■□□ 2.02
SDR39U1-220ENST00000556548 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
SDR39U1-220ENST00000556548 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
SDR39U1-220ENST00000556548 FYCO1Q9BQS8 1478 aa27.68■■■□□ 2.02
SDR39U1-220ENST00000556548 LRRC9Q6ZRR7 1453 aa27.67■■■□□ 2.02
SDR39U1-220ENST00000556548 GRIN2AQ12879 1464 aa27.65■■■□□ 2.02
SDR39U1-220ENST00000556548 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
SDR39U1-220ENST00000556548 CFAP43Q8NDM7 1665 aa27.6■■■□□ 2.01
SDR39U1-220ENST00000556548 RRBP1Q9P2E9 1410 aaKnown RBP27.59■■■□□ 2.01
SDR39U1-220ENST00000556548 SYNJ2O15056 1496 aa27.58■■■□□ 2.01
SDR39U1-220ENST00000556548 KIAA0586Q9BVV6 1533 aa27.57■■■□□ 2
SDR39U1-220ENST00000556548 CCNB3Q8WWL7 1395 aa27.57■■■□□ 2
SDR39U1-220ENST00000556548 ITGAEP38570 1179 aa27.56■■■□□ 2
SDR39U1-220ENST00000556548 PHLDB1Q86UU1 1377 aa27.54■■■□□ 2
SDR39U1-220ENST00000556548 UGGT2Q9NYU1 1516 aa27.51■■□□□ 1.99
SDR39U1-220ENST00000556548 CEP170Q5SW79 1584 aa27.49■■□□□ 1.99
SDR39U1-220ENST00000556548 ARID3CA6NKF2 412 aa27.48■■□□□ 1.99
SDR39U1-220ENST00000556548 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
SDR39U1-220ENST00000556548 MTUS2Q5JR59 1369 aa27.45■■□□□ 1.99
SDR39U1-220ENST00000556548 DISP1Q96F81 1524 aa27.45■■□□□ 1.98
SDR39U1-220ENST00000556548 FAM50AQ14320 339 aaKnown RBP27.44■■□□□ 1.98
SDR39U1-220ENST00000556548 KIAA0556O60303 1618 aa27.4■■□□□ 1.98
SDR39U1-220ENST00000556548 NUP160Q12769 1436 aa27.38■■□□□ 1.97
SDR39U1-220ENST00000556548 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
SDR39U1-220ENST00000556548 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
SDR39U1-220ENST00000556548 CDK13Q14004 1512 aaKnown RBP27.32■■□□□ 1.96
SDR39U1-220ENST00000556548 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
SDR39U1-220ENST00000556548 CCDC18Q5T9S5 1454 aa27.31■■□□□ 1.96
SDR39U1-220ENST00000556548 MAGI3Q5TCQ9 1506 aa27.3■■□□□ 1.96
SDR39U1-220ENST00000556548 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
SDR39U1-220ENST00000556548 EHBP1L1Q8N3D4 1523 aa27.25■■□□□ 1.95
SDR39U1-220ENST00000556548 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
SDR39U1-220ENST00000556548 FGD6Q6ZV73 1430 aa27.23■■□□□ 1.95
SDR39U1-220ENST00000556548 SUPT6HQ7KZ85 1726 aaKnown RBP27.21■■□□□ 1.95
SDR39U1-220ENST00000556548 NUP153P49790 1475 aaKnown RBP27.2■■□□□ 1.94
SDR39U1-220ENST00000556548 PLB1Q6P1J6 1458 aa27.19■■□□□ 1.94
SDR39U1-220ENST00000556548 RAPGEF6Q8TEU7 1601 aa27.19■■□□□ 1.94
SDR39U1-220ENST00000556548 CHD1O14646 1710 aa27.19■■□□□ 1.94
SDR39U1-220ENST00000556548 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
SDR39U1-220ENST00000556548 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
SDR39U1-220ENST00000556548 MYOM3Q5VTT5 1437 aa27.16■■□□□ 1.94
SDR39U1-220ENST00000556548 RAB3GAP2Q9H2M9 1393 aa27.16■■□□□ 1.94
SDR39U1-220ENST00000556548 PRG4Q92954 1404 aaPredicted RBP27.12■■□□□ 1.93
SDR39U1-220ENST00000556548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.11■■□□□ 1.93
SDR39U1-220ENST00000556548 SETD5Q9C0A6 1442 aa27.1■■□□□ 1.93
SDR39U1-220ENST00000556548 ARHGEF11O15085 1522 aa27.1■■□□□ 1.93
SDR39U1-220ENST00000556548 CDK11AQ9UQ88 783 aaPredicted RBP27.06■■□□□ 1.92
SDR39U1-220ENST00000556548 PTPRKQ15262 1439 aa27.04■■□□□ 1.92
SDR39U1-220ENST00000556548 PTPN23Q9H3S7 1636 aa27.03■■□□□ 1.92
SDR39U1-220ENST00000556548 PTPRGP23470 1445 aa26.99■■□□□ 1.91
SDR39U1-220ENST00000556548 CLSPNQ9HAW4 1339 aa26.97■■□□□ 1.91
SDR39U1-220ENST00000556548 ABCA8O94911 1581 aa26.96■■□□□ 1.91
SDR39U1-220ENST00000556548 CHIC2Q9UKJ5 165 aa26.95■■□□□ 1.91
SDR39U1-220ENST00000556548 TROQ12816 1431 aaPredicted RBP26.94■■□□□ 1.9
SDR39U1-220ENST00000556548 ERCC6L2Q5T890 1561 aa26.91■■□□□ 1.9
SDR39U1-220ENST00000556548 TCOF1Q13428 1488 aaKnown RBP26.91■■□□□ 1.9
SDR39U1-220ENST00000556548 ATP10BO94823 1461 aa26.91■■□□□ 1.9
SDR39U1-220ENST00000556548 MIA2Q96PC5 1412 aa26.9■■□□□ 1.9
SDR39U1-220ENST00000556548 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
SDR39U1-220ENST00000556548 SHROOM2Q13796 1616 aa26.88■■□□□ 1.89
SDR39U1-220ENST00000556548 PLEKHD1A6NEE1 506 aa26.88■■□□□ 1.89
SDR39U1-220ENST00000556548 RRP7BPQ9NSQ0 103 aa26.88■■□□□ 1.89
SDR39U1-220ENST00000556548 KIF14Q15058 1648 aa26.85■■□□□ 1.89
SDR39U1-220ENST00000556548 HFM1A2PYH4 1435 aa26.85■■□□□ 1.89
SDR39U1-220ENST00000556548 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
SDR39U1-220ENST00000556548 NAIPQ13075 1403 aa26.82■■□□□ 1.88
SDR39U1-220ENST00000556548 CFDP1Q9UEE9 299 aaPredicted RBP26.81■■□□□ 1.88
SDR39U1-220ENST00000556548 ZNF777Q9ULD5 760 aaPredicted RBP26.81■■□□□ 1.88
SDR39U1-220ENST00000556548 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
SDR39U1-220ENST00000556548 UACAQ9BZF9 1416 aa26.8■■□□□ 1.88
SDR39U1-220ENST00000556548 ZNF316A6NFI3 1004 aaPredicted RBP26.77■■□□□ 1.88
SDR39U1-220ENST00000556548 GPATCH8Q9UKJ3 1502 aaKnown RBP26.77■■□□□ 1.88
SDR39U1-220ENST00000556548 SIN3AQ96ST3 1273 aa26.76■■□□□ 1.87
SDR39U1-220ENST00000556548 NEUROD1Q13562 356 aa26.75■■□□□ 1.87
SDR39U1-220ENST00000556548 ADCY10Q96PN6 1610 aa26.74■■□□□ 1.87
SDR39U1-220ENST00000556548 DAPK1P53355 1430 aa26.73■■□□□ 1.87
SDR39U1-220ENST00000556548 ABCC5O15440 1437 aa26.71■■□□□ 1.87
SDR39U1-220ENST00000556548 CAMSAP2Q08AD1 1489 aa26.69■■□□□ 1.86
SDR39U1-220ENST00000556548 ITSN2Q9NZM3 1697 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms