RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
HNRNPC-223ENST00000556142 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
HNRNPC-223ENST00000556142 ADRA2BP18089 450 aa15.08■□□□□ 0
HNRNPC-223ENST00000556142 WDR97A6NE52 1622 aa15.08■□□□□ 0
HNRNPC-223ENST00000556142 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
HNRNPC-223ENST00000556142 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
HNRNPC-223ENST00000556142 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
HNRNPC-223ENST00000556142 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
HNRNPC-223ENST00000556142 CLIP1P30622 1438 aa14.99□□□□□ -0.01
HNRNPC-223ENST00000556142 SNAPC4Q5SXM2 1469 aa14.98□□□□□ -0.01
HNRNPC-223ENST00000556142 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
HNRNPC-223ENST00000556142 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
HNRNPC-223ENST00000556142 CUL7Q14999 1698 aa14.94□□□□□ -0.02
HNRNPC-223ENST00000556142 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
HNRNPC-223ENST00000556142 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
HNRNPC-223ENST00000556142 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
HNRNPC-223ENST00000556142 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
HNRNPC-223ENST00000556142 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
HNRNPC-223ENST00000556142 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
HNRNPC-223ENST00000556142 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
HNRNPC-223ENST00000556142 RANGAP1P46060 587 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-223ENST00000556142 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
HNRNPC-223ENST00000556142 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
HNRNPC-223ENST00000556142 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
HNRNPC-223ENST00000556142 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
HNRNPC-223ENST00000556142 ADAMTS12P58397 1594 aa14.8□□□□□ -0.04
HNRNPC-223ENST00000556142 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
HNRNPC-223ENST00000556142 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
HNRNPC-223ENST00000556142 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
HNRNPC-223ENST00000556142 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
HNRNPC-223ENST00000556142 SAMD9Q5K651 1589 aa14.69□□□□□ -0.06
HNRNPC-223ENST00000556142 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
HNRNPC-223ENST00000556142 FHOD3Q2V2M9 1422 aa14.67□□□□□ -0.06
HNRNPC-223ENST00000556142 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
HNRNPC-223ENST00000556142 KIF13AQ9H1H9 1805 aa14.65□□□□□ -0.06
HNRNPC-223ENST00000556142 NUP160Q12769 1436 aa14.65□□□□□ -0.06
HNRNPC-223ENST00000556142 APLP2Q06481 763 aa14.65□□□□□ -0.06
HNRNPC-223ENST00000556142 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
HNRNPC-223ENST00000556142 KANK4Q5T7N3 995 aaPredicted RBP14.64□□□□□ -0.07
HNRNPC-223ENST00000556142 KIAA0586Q9BVV6 1533 aa14.63□□□□□ -0.07
HNRNPC-223ENST00000556142 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
HNRNPC-223ENST00000556142 IQGAP2Q13576 1575 aa14.63□□□□□ -0.07
HNRNPC-223ENST00000556142 SHROOM2Q13796 1616 aa14.62□□□□□ -0.07
HNRNPC-223ENST00000556142 UGGT2Q9NYU1 1516 aa14.62□□□□□ -0.07
HNRNPC-223ENST00000556142 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
HNRNPC-223ENST00000556142 PCF11O94913 1555 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-223ENST00000556142 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
HNRNPC-223ENST00000556142 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
HNRNPC-223ENST00000556142 HRCP23327 699 aa14.57□□□□□ -0.08
HNRNPC-223ENST00000556142 FAM69CQ0P6D2 419 aa14.57□□□□□ -0.08
HNRNPC-223ENST00000556142 FYCO1Q9BQS8 1478 aa14.57□□□□□ -0.08
HNRNPC-223ENST00000556142 PRG4Q92954 1404 aaPredicted RBP14.55□□□□□ -0.08
HNRNPC-223ENST00000556142 ABCC10Q5T3U5 1492 aa14.55□□□□□ -0.08
HNRNPC-223ENST00000556142 ILDR1Q86SU0 546 aaPredicted RBP14.55□□□□□ -0.08
HNRNPC-223ENST00000556142 DISP1Q96F81 1524 aa14.54□□□□□ -0.08
HNRNPC-223ENST00000556142 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
HNRNPC-223ENST00000556142 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
HNRNPC-223ENST00000556142 LRRC9Q6ZRR7 1453 aa14.53□□□□□ -0.08
HNRNPC-223ENST00000556142 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
HNRNPC-223ENST00000556142 CFAP43Q8NDM7 1665 aa14.51□□□□□ -0.09
HNRNPC-223ENST00000556142 KIAA0556O60303 1618 aa14.5□□□□□ -0.09
HNRNPC-223ENST00000556142 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
HNRNPC-223ENST00000556142 DIP2BQ9P265 1576 aa14.5□□□□□ -0.09
HNRNPC-223ENST00000556142 KDM6BO15054 1643 aa14.49□□□□□ -0.09
HNRNPC-223ENST00000556142 RRBP1Q9P2E9 1410 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-223ENST00000556142 LRRIQ1Q96JM4 1722 aa14.45□□□□□ -0.1
HNRNPC-223ENST00000556142 ATP1B4Q9UN42 357 aaPredicted RBP14.45□□□□□ -0.1
HNRNPC-223ENST00000556142 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
HNRNPC-223ENST00000556142 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
HNRNPC-223ENST00000556142 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
HNRNPC-223ENST00000556142 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.1
HNRNPC-223ENST00000556142 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
HNRNPC-223ENST00000556142 CCNB3Q8WWL7 1395 aa14.4□□□□□ -0.1
HNRNPC-223ENST00000556142 EPRSP07814 1512 aaKnown RBP14.4□□□□□ -0.1
HNRNPC-223ENST00000556142 TSPOAP1O95153 1857 aa14.4□□□□□ -0.11
HNRNPC-223ENST00000556142 MAGI3Q5TCQ9 1506 aa14.38□□□□□ -0.11
HNRNPC-223ENST00000556142 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-223ENST00000556142 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-223ENST00000556142 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
HNRNPC-223ENST00000556142 MTUS2Q5JR59 1369 aa14.35□□□□□ -0.11
HNRNPC-223ENST00000556142 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
HNRNPC-223ENST00000556142 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.11
HNRNPC-223ENST00000556142 PLB1Q6P1J6 1458 aa14.33□□□□□ -0.12
HNRNPC-223ENST00000556142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
HNRNPC-223ENST00000556142 ADGRL1O94910 1474 aa14.32□□□□□ -0.12
HNRNPC-223ENST00000556142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.122e-10■□□□□ 8.9
HNRNPC-223ENST00000556142 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
HNRNPC-223ENST00000556142 ABCA8O94911 1581 aa14.32□□□□□ -0.12
HNRNPC-223ENST00000556142 NCOA2Q15596 1464 aa14.32□□□□□ -0.12
HNRNPC-223ENST00000556142 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
HNRNPC-223ENST00000556142 PTPRGP23470 1445 aa14.28□□□□□ -0.12
HNRNPC-223ENST00000556142 FGD6Q6ZV73 1430 aa14.28□□□□□ -0.12
HNRNPC-223ENST00000556142 MYOM3Q5VTT5 1437 aa14.26□□□□□ -0.13
HNRNPC-223ENST00000556142 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
HNRNPC-223ENST00000556142 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
HNRNPC-223ENST00000556142 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-223ENST00000556142 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
HNRNPC-223ENST00000556142 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
HNRNPC-223ENST00000556142 GLI2P10070 1586 aa14.25□□□□□ -0.13
HNRNPC-223ENST00000556142 PPRC1Q5VV67 1664 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms