RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 GRIN2AQ12879 1464 aa37.97■■■■□ 3.67
RCCD1-203ENST00000555155 CHD1O14646 1710 aa37.84■■■■□ 3.65
RCCD1-203ENST00000555155 CEP170Q5SW79 1584 aa37.76■■■■□ 3.64
RCCD1-203ENST00000555155 CTTNBP2Q8WZ74 1663 aa37.75■■■■□ 3.63
RCCD1-203ENST00000555155 PPARGC1BQ86YN6 1023 aaKnown RBP37.74■■■■□ 3.63
RCCD1-203ENST00000555155 NUP160Q12769 1436 aa37.73■■■■□ 3.63
RCCD1-203ENST00000555155 ARAP1Q96P48 1450 aa37.68■■■■□ 3.62
RCCD1-203ENST00000555155 ARHGAP35Q9NRY4 1499 aa37.65■■■■□ 3.62
RCCD1-203ENST00000555155 KIAA0586Q9BVV6 1533 aa37.65■■■■□ 3.62
RCCD1-203ENST00000555155 VPS8Q8N3P4 1428 aa37.64■■■■□ 3.62
RCCD1-203ENST00000555155 IQGAP2Q13576 1575 aa37.61■■■■□ 3.61
RCCD1-203ENST00000555155 PCGF6Q9BYE7 350 aa37.58■■■■□ 3.61
RCCD1-203ENST00000555155 TTBK1Q5TCY1 1321 aaPredicted RBP37.49■■■■□ 3.59
RCCD1-203ENST00000555155 P3H3Q8IVL6 736 aa37.47■■■■□ 3.59
RCCD1-203ENST00000555155 TRIM26Q12899 539 aaPredicted RBP37.44■■■■□ 3.58
RCCD1-203ENST00000555155 JPH4Q96JJ6 628 aa37.43■■■■□ 3.58
RCCD1-203ENST00000555155 UGGT2Q9NYU1 1516 aa37.43■■■■□ 3.58
RCCD1-203ENST00000555155 CLASP1Q7Z460 1538 aa37.42■■■■□ 3.58
RCCD1-203ENST00000555155 OSCARQ8IYS5 282 aa37.41■■■■□ 3.58
RCCD1-203ENST00000555155 EFCAB5A4FU69 1503 aa37.37■■■■□ 3.57
RCCD1-203ENST00000555155 SAMD9Q5K651 1589 aa37.37■■■■□ 3.57
RCCD1-203ENST00000555155 FHOD3Q2V2M9 1422 aa37.36■■■■□ 3.57
RCCD1-203ENST00000555155 DISP1Q96F81 1524 aa37.32■■■■□ 3.56
RCCD1-203ENST00000555155 APLP2Q06481 763 aa37.29■■■■□ 3.56
RCCD1-203ENST00000555155 SHROOM2Q13796 1616 aa37.28■■■■□ 3.56
RCCD1-203ENST00000555155 PRG4Q92954 1404 aaPredicted RBP37.25■■■■□ 3.55
RCCD1-203ENST00000555155 KIAA0556O60303 1618 aa37.25■■■■□ 3.55
RCCD1-203ENST00000555155 CARMIL2Q6F5E8 1435 aa37.18■■■■□ 3.54
RCCD1-203ENST00000555155 PCF11O94913 1555 aaKnown RBP37.16■■■■□ 3.54
RCCD1-203ENST00000555155 ERCC6L2Q5T890 1561 aa37.15■■■■□ 3.54
RCCD1-203ENST00000555155 ATP1B4Q9UN42 357 aaPredicted RBP37.07■■■■□ 3.53
RCCD1-203ENST00000555155 FMN1Q68DA7 1419 aa37.04■■■■□ 3.52
RCCD1-203ENST00000555155 KANK4Q5T7N3 995 aaPredicted RBP37.03■■■■□ 3.52
RCCD1-203ENST00000555155 FYCO1Q9BQS8 1478 aa36.98■■■■□ 3.51
RCCD1-203ENST00000555155 CASKIN1Q8WXD9 1431 aa36.98■■■■□ 3.51
RCCD1-203ENST00000555155 TIAM1Q13009 1591 aa36.96■■■■□ 3.51
RCCD1-203ENST00000555155 PTPRGP23470 1445 aa36.93■■■■□ 3.5
RCCD1-203ENST00000555155 CFAP43Q8NDM7 1665 aa36.9■■■■□ 3.5
RCCD1-203ENST00000555155 PLB1Q6P1J6 1458 aa36.87■■■■□ 3.49
RCCD1-203ENST00000555155 MAP3K1Q13233 1512 aa36.86■■■■□ 3.49
RCCD1-203ENST00000555155 LRRIQ1Q96JM4 1722 aa36.84■■■■□ 3.49
RCCD1-203ENST00000555155 ARHGEF11O15085 1522 aa36.81■■■■□ 3.48
RCCD1-203ENST00000555155 RAPGEF6Q8TEU7 1601 aa36.78■■■■□ 3.48
RCCD1-203ENST00000555155 LRRC9Q6ZRR7 1453 aa36.78■■■■□ 3.48
RCCD1-203ENST00000555155 ABCA8O94911 1581 aa36.76■■■■□ 3.48
RCCD1-203ENST00000555155 ARID3CA6NKF2 412 aa36.73■■■■□ 3.47
RCCD1-203ENST00000555155 HECW1Q76N89 1606 aa36.72■■■■□ 3.47
RCCD1-203ENST00000555155 NUP153P49790 1475 aaKnown RBP36.72■■■■□ 3.47
RCCD1-203ENST00000555155 UACAQ9BZF9 1416 aa36.7■■■■□ 3.47
RCCD1-203ENST00000555155 RIMBP3CA6NJZ7 1639 aa36.68■■■■□ 3.46
RCCD1-203ENST00000555155 RIMBP3BA6NNM3 1639 aa36.68■■■■□ 3.46
RCCD1-203ENST00000555155 RIMBP3Q9UFD9 1639 aa36.68■■■■□ 3.46
RCCD1-203ENST00000555155 EPRSP07814 1512 aaKnown RBP36.65■■■■□ 3.46
RCCD1-203ENST00000555155 CDK13Q14004 1512 aaKnown RBP36.62■■■■□ 3.45
RCCD1-203ENST00000555155 ABCC2Q92887 1545 aa36.6■■■■□ 3.45
RCCD1-203ENST00000555155 CCDC18Q5T9S5 1454 aa36.58■■■■□ 3.45
RCCD1-203ENST00000555155 MTUS2Q5JR59 1369 aa36.55■■■■□ 3.44
RCCD1-203ENST00000555155 UHRF1BP1LA0JNW5 1464 aa36.54■■■■□ 3.44
RCCD1-203ENST00000555155 ATP10BO94823 1461 aa36.53■■■■□ 3.44
RCCD1-203ENST00000555155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.52■■■■□ 3.44
RCCD1-203ENST00000555155 HNRNPUL2Q1KMD3 747 aaKnown RBP36.52■■■■□ 3.44
RCCD1-203ENST00000555155 ADCY10Q96PN6 1610 aa36.52■■■■□ 3.44
RCCD1-203ENST00000555155 MAGI3Q5TCQ9 1506 aa36.51■■■■□ 3.43
RCCD1-203ENST00000555155 CYB5RLQ6IPT4 315 aa36.5■■■■□ 3.43
RCCD1-203ENST00000555155 PHLDB1Q86UU1 1377 aa36.5■■■■□ 3.43
RCCD1-203ENST00000555155 RRBP1Q9P2E9 1410 aaKnown RBP36.47■■■■□ 3.43
RCCD1-203ENST00000555155 EHBP1L1Q8N3D4 1523 aa36.45■■■■□ 3.43
RCCD1-203ENST00000555155 CCNB3Q8WWL7 1395 aa36.41■■■■□ 3.42
RCCD1-203ENST00000555155 KDM5BQ9UGL1 1544 aa36.4■■■■□ 3.42
RCCD1-203ENST00000555155 SUPT6HQ7KZ85 1726 aaKnown RBP36.38■■■■□ 3.41
RCCD1-203ENST00000555155 ZCCHC11Q5TAX3 1644 aaKnown RBP36.36■■■■□ 3.41
RCCD1-203ENST00000555155 NCOA2Q15596 1464 aa36.35■■■■□ 3.41
RCCD1-203ENST00000555155 HRCP23327 699 aa36.35■■■■□ 3.41
RCCD1-203ENST00000555155 CDK11AQ9UQ88 783 aaPredicted RBP36.34■■■■□ 3.41
RCCD1-203ENST00000555155 PLEKHD1A6NEE1 506 aa36.28■■■■□ 3.4
RCCD1-203ENST00000555155 DNAJC5Q9H3Z4 198 aa36.27■■■■□ 3.4
RCCD1-203ENST00000555155 TROQ12816 1431 aaPredicted RBP36.26■■■■□ 3.4
RCCD1-203ENST00000555155 ITGAEP38570 1179 aa36.26■■■■□ 3.39
RCCD1-203ENST00000555155 FAM50AQ14320 339 aaKnown RBP36.24■■■■□ 3.39
RCCD1-203ENST00000555155 NPM1P06748 294 aaKnown RBP eCLIP36.22■■■■□ 3.39
RCCD1-203ENST00000555155 FGD6Q6ZV73 1430 aa36.19■■■■□ 3.38
RCCD1-203ENST00000555155 MYOM3Q5VTT5 1437 aa36.18■■■■□ 3.38
RCCD1-203ENST00000555155 KIF14Q15058 1648 aa36.15■■■■□ 3.38
RCCD1-203ENST00000555155 ASXL2Q76L83 1435 aa36.12■■■■□ 3.37
RCCD1-203ENST00000555155 KCNH8Q96L42 1107 aa36.09■■■■□ 3.37
RCCD1-203ENST00000555155 WDR7Q9Y4E6 1490 aa36.08■■■■□ 3.37
RCCD1-203ENST00000555155 CCER1Q8TC90 406 aaPredicted RBP36.06■■■■□ 3.36
RCCD1-203ENST00000555155 PTPN23Q9H3S7 1636 aa36.04■■■■□ 3.36
RCCD1-203ENST00000555155 ABCC10Q5T3U5 1492 aa36■■■■□ 3.35
RCCD1-203ENST00000555155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.99■■■■□ 3.35
RCCD1-203ENST00000555155 MAPKBP1O60336 1514 aa35.98■■■■□ 3.35
RCCD1-203ENST00000555155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.96■■■■□ 3.351e-6■■■■■ 42.9
RCCD1-203ENST00000555155 TTC37Q6PGP7 1564 aa35.94■■■■□ 3.34
RCCD1-203ENST00000555155 GPATCH8Q9UKJ3 1502 aaKnown RBP35.91■■■■□ 3.34
RCCD1-203ENST00000555155 MIA2Q96PC5 1412 aa35.9■■■■□ 3.34
RCCD1-203ENST00000555155 TCOF1Q13428 1488 aaKnown RBP35.9■■■■□ 3.34
RCCD1-203ENST00000555155 ITSN2Q9NZM3 1697 aa35.85■■■■□ 3.33
RCCD1-203ENST00000555155 CDC42BPAQ5VT25 1732 aa35.85■■■■□ 3.33
RCCD1-203ENST00000555155 PTPRKQ15262 1439 aa35.84■■■■□ 3.33
RCCD1-203ENST00000555155 ZEB1P37275 1124 aaPredicted RBP35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms