RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
TUBB3-206ENST00000554444 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
TUBB3-206ENST00000554444 APLP2Q06481 763 aa24.5■■□□□ 1.51
TUBB3-206ENST00000554444 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
TUBB3-206ENST00000554444 SNAPC4Q5SXM2 1469 aa24.48■■□□□ 1.51
TUBB3-206ENST00000554444 EFCAB5A4FU69 1503 aa24.46■■□□□ 1.51
TUBB3-206ENST00000554444 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
TUBB3-206ENST00000554444 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
TUBB3-206ENST00000554444 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
TUBB3-206ENST00000554444 FHOD3Q2V2M9 1422 aa24.38■■□□□ 1.49
TUBB3-206ENST00000554444 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
TUBB3-206ENST00000554444 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
TUBB3-206ENST00000554444 SAMD9Q5K651 1589 aa24.35■■□□□ 1.49
TUBB3-206ENST00000554444 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
TUBB3-206ENST00000554444 CHMP7Q8WUX9 453 aaPredicted RBP24.34■■□□□ 1.49
TUBB3-206ENST00000554444 IQGAP2Q13576 1575 aa24.32■■□□□ 1.48
TUBB3-206ENST00000554444 KIAA0586Q9BVV6 1533 aa24.32■■□□□ 1.48
TUBB3-206ENST00000554444 MAP3K1Q13233 1512 aa24.3■■□□□ 1.48
TUBB3-206ENST00000554444 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
TUBB3-206ENST00000554444 FMN1Q68DA7 1419 aa24.29■■□□□ 1.48
TUBB3-206ENST00000554444 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
TUBB3-206ENST00000554444 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
TUBB3-206ENST00000554444 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
TUBB3-206ENST00000554444 FBLN2P98095 1184 aa24.23■■□□□ 1.47
TUBB3-206ENST00000554444 PCF11O94913 1555 aaKnown RBP24.22■■□□□ 1.47
TUBB3-206ENST00000554444 NUP160Q12769 1436 aa24.21■■□□□ 1.47
TUBB3-206ENST00000554444 TIAM1Q13009 1591 aa24.2■■□□□ 1.46
TUBB3-206ENST00000554444 CEP170Q5SW79 1584 aa24.19■■□□□ 1.46
TUBB3-206ENST00000554444 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
TUBB3-206ENST00000554444 LRRC9Q6ZRR7 1453 aa24.15■■□□□ 1.46
TUBB3-206ENST00000554444 DISP1Q96F81 1524 aa24.14■■□□□ 1.45
TUBB3-206ENST00000554444 JPH4Q96JJ6 628 aa24.11■■□□□ 1.45
TUBB3-206ENST00000554444 CFAP43Q8NDM7 1665 aa24.07■■□□□ 1.44
TUBB3-206ENST00000554444 KIAA0556O60303 1618 aa24.06■■□□□ 1.44
TUBB3-206ENST00000554444 RRBP1Q9P2E9 1410 aaKnown RBP24.06■■□□□ 1.44
TUBB3-206ENST00000554444 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
TUBB3-206ENST00000554444 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
TUBB3-206ENST00000554444 PHLDB1Q86UU1 1377 aa23.96■■□□□ 1.43
TUBB3-206ENST00000554444 CCNB3Q8WWL7 1395 aa23.96■■□□□ 1.43
TUBB3-206ENST00000554444 LRRIQ1Q96JM4 1722 aa23.95■■□□□ 1.43
TUBB3-206ENST00000554444 CCDC18Q5T9S5 1454 aa23.95■■□□□ 1.42
TUBB3-206ENST00000554444 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
TUBB3-206ENST00000554444 CHD1O14646 1710 aa23.93■■□□□ 1.42
TUBB3-206ENST00000554444 MTUS2Q5JR59 1369 aa23.93■■□□□ 1.42
TUBB3-206ENST00000554444 EPRSP07814 1512 aaKnown RBP23.93■■□□□ 1.42
TUBB3-206ENST00000554444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.91■■□□□ 1.42
TUBB3-206ENST00000554444 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-206ENST00000554444 NUP153P49790 1475 aaKnown RBP23.86■■□□□ 1.41
TUBB3-206ENST00000554444 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
TUBB3-206ENST00000554444 CCER1Q8TC90 406 aaPredicted RBP23.83■■□□□ 1.41
TUBB3-206ENST00000554444 RAPGEF6Q8TEU7 1601 aa23.83■■□□□ 1.41
TUBB3-206ENST00000554444 EHBP1L1Q8N3D4 1523 aa23.83■■□□□ 1.41
TUBB3-206ENST00000554444 CDK13Q14004 1512 aaKnown RBP23.82■■□□□ 1.4
TUBB3-206ENST00000554444 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
TUBB3-206ENST00000554444 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
TUBB3-206ENST00000554444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.8■■□□□ 1.4
TUBB3-206ENST00000554444 NCOA2Q15596 1464 aa23.8■■□□□ 1.4
TUBB3-206ENST00000554444 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
TUBB3-206ENST00000554444 ARID3CA6NKF2 412 aa23.78■■□□□ 1.4
TUBB3-206ENST00000554444 PTPRGP23470 1445 aa23.76■■□□□ 1.39
TUBB3-206ENST00000554444 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
TUBB3-206ENST00000554444 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
TUBB3-206ENST00000554444 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
TUBB3-206ENST00000554444 ABCA8O94911 1581 aa23.74■■□□□ 1.39
TUBB3-206ENST00000554444 CDK11AQ9UQ88 783 aaPredicted RBP23.74■■□□□ 1.39
TUBB3-206ENST00000554444 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
TUBB3-206ENST00000554444 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
TUBB3-206ENST00000554444 ITGAEP38570 1179 aa23.7■■□□□ 1.38
TUBB3-206ENST00000554444 ATP10BO94823 1461 aa23.66■■□□□ 1.38
TUBB3-206ENST00000554444 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
TUBB3-206ENST00000554444 TROQ12816 1431 aaPredicted RBP23.64■■□□□ 1.37
TUBB3-206ENST00000554444 UACAQ9BZF9 1416 aa23.61■■□□□ 1.37
TUBB3-206ENST00000554444 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
TUBB3-206ENST00000554444 PLEKHD1A6NEE1 506 aa23.58■■□□□ 1.37
TUBB3-206ENST00000554444 TCOF1Q13428 1488 aaKnown RBP23.58■■□□□ 1.37
TUBB3-206ENST00000554444 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
TUBB3-206ENST00000554444 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
TUBB3-206ENST00000554444 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
TUBB3-206ENST00000554444 PTPRKQ15262 1439 aa23.54■■□□□ 1.36
TUBB3-206ENST00000554444 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
TUBB3-206ENST00000554444 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
TUBB3-206ENST00000554444 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
TUBB3-206ENST00000554444 ADCY10Q96PN6 1610 aa23.49■■□□□ 1.35
TUBB3-206ENST00000554444 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
TUBB3-206ENST00000554444 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
TUBB3-206ENST00000554444 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
TUBB3-206ENST00000554444 KIF14Q15058 1648 aa23.45■■□□□ 1.34
TUBB3-206ENST00000554444 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
TUBB3-206ENST00000554444 HFM1A2PYH4 1435 aa23.43■■□□□ 1.34
TUBB3-206ENST00000554444 CFDP1Q9UEE9 299 aaPredicted RBP23.42■■□□□ 1.34
TUBB3-206ENST00000554444 ZNF644Q9H582 1327 aaPredicted RBP23.42■■□□□ 1.34
TUBB3-206ENST00000554444 NAIPQ13075 1403 aa23.38■■□□□ 1.33
TUBB3-206ENST00000554444 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
TUBB3-206ENST00000554444 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
TUBB3-206ENST00000554444 ABCC5O15440 1437 aa23.34■■□□□ 1.33
TUBB3-206ENST00000554444 DAPK1P53355 1430 aa23.34■■□□□ 1.33
TUBB3-206ENST00000554444 AKNAQ7Z591 1439 aa23.34■■□□□ 1.33
TUBB3-206ENST00000554444 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
TUBB3-206ENST00000554444 CAMSAP2Q08AD1 1489 aa23.31■■□□□ 1.32
TUBB3-206ENST00000554444 ROCK1Q13464 1354 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms