RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
TUBB3-206ENST00000554444 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
TUBB3-206ENST00000554444 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
TUBB3-206ENST00000554444 DCAF1Q9Y4B6 1507 aa29.41■■■□□ 2.3
TUBB3-206ENST00000554444 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
TUBB3-206ENST00000554444 ABCC9O60706 1549 aa29.14■■■□□ 2.26
TUBB3-206ENST00000554444 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
TUBB3-206ENST00000554444 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
TUBB3-206ENST00000554444 NACADO15069 1562 aa28.77■■■□□ 2.2
TUBB3-206ENST00000554444 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
TUBB3-206ENST00000554444 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
TUBB3-206ENST00000554444 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
TUBB3-206ENST00000554444 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
TUBB3-206ENST00000554444 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
TUBB3-206ENST00000554444 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
TUBB3-206ENST00000554444 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
TUBB3-206ENST00000554444 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
TUBB3-206ENST00000554444 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
TUBB3-206ENST00000554444 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
TUBB3-206ENST00000554444 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
TUBB3-206ENST00000554444 WIZO95785 1651 aa27.21■■□□□ 1.95
TUBB3-206ENST00000554444 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
TUBB3-206ENST00000554444 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
TUBB3-206ENST00000554444 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
TUBB3-206ENST00000554444 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
TUBB3-206ENST00000554444 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
TUBB3-206ENST00000554444 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
TUBB3-206ENST00000554444 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
TUBB3-206ENST00000554444 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
TUBB3-206ENST00000554444 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
TUBB3-206ENST00000554444 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
TUBB3-206ENST00000554444 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
TUBB3-206ENST00000554444 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
TUBB3-206ENST00000554444 ABCC8Q09428 1581 aa26.15■■□□□ 1.78
TUBB3-206ENST00000554444 CFTRP13569 1480 aa26.06■■□□□ 1.76
TUBB3-206ENST00000554444 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
TUBB3-206ENST00000554444 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
TUBB3-206ENST00000554444 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
TUBB3-206ENST00000554444 FAM9AQ8IZU1 332 aaPredicted RBP25.92■■□□□ 1.74
TUBB3-206ENST00000554444 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
TUBB3-206ENST00000554444 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
TUBB3-206ENST00000554444 SOGA1O94964 1423 aa25.77■■□□□ 1.72
TUBB3-206ENST00000554444 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
TUBB3-206ENST00000554444 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
TUBB3-206ENST00000554444 EEA1Q15075 1411 aa25.7■■□□□ 1.71
TUBB3-206ENST00000554444 CUX1P39880 1505 aa25.68■■□□□ 1.7
TUBB3-206ENST00000554444 BIVM-ERCC5R4GMW8 1640 aa25.68■■□□□ 1.7
TUBB3-206ENST00000554444 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
TUBB3-206ENST00000554444 NESP48681 1621 aa25.64■■□□□ 1.7
TUBB3-206ENST00000554444 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
TUBB3-206ENST00000554444 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
TUBB3-206ENST00000554444 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
TUBB3-206ENST00000554444 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
TUBB3-206ENST00000554444 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
TUBB3-206ENST00000554444 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
TUBB3-206ENST00000554444 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
TUBB3-206ENST00000554444 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
TUBB3-206ENST00000554444 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
TUBB3-206ENST00000554444 KIF27Q86VH2 1401 aa25.35■■□□□ 1.65
TUBB3-206ENST00000554444 TNIKQ9UKE5 1360 aa25.34■■□□□ 1.65
TUBB3-206ENST00000554444 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
TUBB3-206ENST00000554444 KIF21BO75037 1637 aa25.3■■□□□ 1.64
TUBB3-206ENST00000554444 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
TUBB3-206ENST00000554444 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
TUBB3-206ENST00000554444 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
TUBB3-206ENST00000554444 PRXQ9BXM0 1461 aa25.24■■□□□ 1.63
TUBB3-206ENST00000554444 CUX2O14529 1486 aa25.23■■□□□ 1.63
TUBB3-206ENST00000554444 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
TUBB3-206ENST00000554444 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
TUBB3-206ENST00000554444 IGF1RP08069 1367 aa25.19■■□□□ 1.62
TUBB3-206ENST00000554444 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
TUBB3-206ENST00000554444 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
TUBB3-206ENST00000554444 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
TUBB3-206ENST00000554444 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.61
TUBB3-206ENST00000554444 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
TUBB3-206ENST00000554444 PCGF6Q9BYE7 350 aa25.05■■□□□ 1.6
TUBB3-206ENST00000554444 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
TUBB3-206ENST00000554444 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
TUBB3-206ENST00000554444 TRIM26Q12899 539 aaPredicted RBP24.96■■□□□ 1.59
TUBB3-206ENST00000554444 CLIP1P30622 1438 aa24.95■■□□□ 1.59
TUBB3-206ENST00000554444 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.58
TUBB3-206ENST00000554444 WDR62O43379 1518 aa24.95■■□□□ 1.58
TUBB3-206ENST00000554444 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
TUBB3-206ENST00000554444 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
TUBB3-206ENST00000554444 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
TUBB3-206ENST00000554444 ABCA5Q8WWZ7 1642 aa24.89■■□□□ 1.58
TUBB3-206ENST00000554444 HRCP23327 699 aa24.86■■□□□ 1.57
TUBB3-206ENST00000554444 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
TUBB3-206ENST00000554444 CUL7Q14999 1698 aa24.81■■□□□ 1.56
TUBB3-206ENST00000554444 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
TUBB3-206ENST00000554444 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
TUBB3-206ENST00000554444 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.55
TUBB3-206ENST00000554444 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
TUBB3-206ENST00000554444 PPARGC1BQ86YN6 1023 aaKnown RBP24.71■■□□□ 1.55
TUBB3-206ENST00000554444 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.55
TUBB3-206ENST00000554444 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
TUBB3-206ENST00000554444 ARHGAP35Q9NRY4 1499 aa24.68■■□□□ 1.54
TUBB3-206ENST00000554444 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
TUBB3-206ENST00000554444 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.53
TUBB3-206ENST00000554444 PBRM1Q86U86 1689 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms