RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 CUL7Q14999 1698 aa28.89■■■□□ 2.22
TUBB3-205ENST00000554336 EEA1Q15075 1411 aa28.81■■■□□ 2.2
TUBB3-205ENST00000554336 PRG4Q92954 1404 aaPredicted RBP28.76■■■□□ 2.19
TUBB3-205ENST00000554336 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
TUBB3-205ENST00000554336 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
TUBB3-205ENST00000554336 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
TUBB3-205ENST00000554336 JPH4Q96JJ6 628 aa28.71■■■□□ 2.19
TUBB3-205ENST00000554336 CSRNP3Q8WYN3 585 aa28.67■■■□□ 2.18
TUBB3-205ENST00000554336 RAPGEF2Q9Y4G8 1499 aa28.65■■■□□ 2.18
TUBB3-205ENST00000554336 KIF21BO75037 1637 aa28.61■■■□□ 2.17
TUBB3-205ENST00000554336 KIF13AQ9H1H9 1805 aa28.59■■■□□ 2.17
TUBB3-205ENST00000554336 KIAA0586Q9BVV6 1533 aa28.55■■■□□ 2.16
TUBB3-205ENST00000554336 ADCY10Q96PN6 1610 aa28.49■■■□□ 2.15
TUBB3-205ENST00000554336 CTTNBP2Q8WZ74 1663 aa28.48■■■□□ 2.15
TUBB3-205ENST00000554336 GOLGA3Q08378 1498 aa28.4■■■□□ 2.14
TUBB3-205ENST00000554336 MAPKBP1O60336 1514 aa28.4■■■□□ 2.14
TUBB3-205ENST00000554336 IQGAP2Q13576 1575 aa28.4■■■□□ 2.14
TUBB3-205ENST00000554336 NPM1P06748 294 aaKnown RBP eCLIP28.37■■■□□ 2.13
TUBB3-205ENST00000554336 ABCC10Q5T3U5 1492 aa28.37■■■□□ 2.13
TUBB3-205ENST00000554336 DIP2BQ9P265 1576 aa28.36■■■□□ 2.13
TUBB3-205ENST00000554336 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
TUBB3-205ENST00000554336 EHMT2Q96KQ7 1210 aa28.32■■■□□ 2.12
TUBB3-205ENST00000554336 AEBP2Q6ZN18 517 aaPredicted RBP28.3■■■□□ 2.12
TUBB3-205ENST00000554336 TTBK1Q5TCY1 1321 aaPredicted RBP28.28■■■□□ 2.12
TUBB3-205ENST00000554336 PTPRGP23470 1445 aa28.27■■■□□ 2.12
TUBB3-205ENST00000554336 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
TUBB3-205ENST00000554336 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
TUBB3-205ENST00000554336 TNIKQ9UKE5 1360 aa28.23■■■□□ 2.11
TUBB3-205ENST00000554336 TSPOAP1O95153 1857 aa28.21■■■□□ 2.11
TUBB3-205ENST00000554336 DISP1Q96F81 1524 aa28.19■■■□□ 2.1
TUBB3-205ENST00000554336 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
TUBB3-205ENST00000554336 KIAA0556O60303 1618 aa28.15■■■□□ 2.1
TUBB3-205ENST00000554336 ABCC2Q92887 1545 aa28.15■■■□□ 2.1
TUBB3-205ENST00000554336 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
TUBB3-205ENST00000554336 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
TUBB3-205ENST00000554336 KDM6BO15054 1643 aa28.1■■■□□ 2.09
TUBB3-205ENST00000554336 UHRF1BP1LA0JNW5 1464 aa28.08■■■□□ 2.09
TUBB3-205ENST00000554336 ASXL2Q76L83 1435 aa28.07■■■□□ 2.08
TUBB3-205ENST00000554336 UACAQ9BZF9 1416 aa28.07■■■□□ 2.08
TUBB3-205ENST00000554336 EFCAB5A4FU69 1503 aa28.02■■■□□ 2.08
TUBB3-205ENST00000554336 PLB1Q6P1J6 1458 aa28.02■■■□□ 2.08
TUBB3-205ENST00000554336 PPRC1Q5VV67 1664 aaKnown RBP28.01■■■□□ 2.07
TUBB3-205ENST00000554336 RANGAP1P46060 587 aaPredicted RBP27.99■■■□□ 2.07
TUBB3-205ENST00000554336 ZCCHC11Q5TAX3 1644 aaKnown RBP27.99■■■□□ 2.07
TUBB3-205ENST00000554336 GLI2P10070 1586 aa27.99■■■□□ 2.07
TUBB3-205ENST00000554336 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
TUBB3-205ENST00000554336 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
TUBB3-205ENST00000554336 FHOD3Q2V2M9 1422 aa27.92■■■□□ 2.06
TUBB3-205ENST00000554336 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
TUBB3-205ENST00000554336 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
TUBB3-205ENST00000554336 EPRSP07814 1512 aaKnown RBP27.9■■■□□ 2.06
TUBB3-205ENST00000554336 CLIP1P30622 1438 aa27.89■■■□□ 2.06
TUBB3-205ENST00000554336 MAP3K4Q9Y6R4 1608 aa27.89■■■□□ 2.05
TUBB3-205ENST00000554336 KDM4FA0A1W2PPD8 638 aa27.81■■■□□ 2.04
TUBB3-205ENST00000554336 ABCA8O94911 1581 aa27.81■■■□□ 2.04
TUBB3-205ENST00000554336 WDR7Q9Y4E6 1490 aa27.79■■■□□ 2.04
TUBB3-205ENST00000554336 COL17A1Q9UMD9 1497 aaPredicted RBP27.78■■■□□ 2.04
TUBB3-205ENST00000554336 RAPGEF6Q8TEU7 1601 aa27.73■■■□□ 2.03
TUBB3-205ENST00000554336 TEX14Q8IWB6 1497 aa27.72■■■□□ 2.03
TUBB3-205ENST00000554336 PCF11O94913 1555 aaKnown RBP27.69■■■□□ 2.02
TUBB3-205ENST00000554336 FMN1Q68DA7 1419 aa27.67■■■□□ 2.02
TUBB3-205ENST00000554336 CFAP43Q8NDM7 1665 aa27.66■■■□□ 2.02
TUBB3-205ENST00000554336 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.01
TUBB3-205ENST00000554336 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
TUBB3-205ENST00000554336 LRRIQ1Q96JM4 1722 aa27.63■■■□□ 2.01
TUBB3-205ENST00000554336 CD109Q6YHK3 1445 aa27.6■■■□□ 2.01
TUBB3-205ENST00000554336 ADGRL1O94910 1474 aa27.6■■■□□ 2.01
TUBB3-205ENST00000554336 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
TUBB3-205ENST00000554336 MAGI3Q5TCQ9 1506 aa27.59■■■□□ 2.01
TUBB3-205ENST00000554336 HECW1Q76N89 1606 aa27.59■■■□□ 2.01
TUBB3-205ENST00000554336 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
TUBB3-205ENST00000554336 ATP10BO94823 1461 aa27.56■■■□□ 2
TUBB3-205ENST00000554336 FYCO1Q9BQS8 1478 aa27.54■■■□□ 2
TUBB3-205ENST00000554336 VPS8Q8N3P4 1428 aa27.53■■■□□ 2
TUBB3-205ENST00000554336 CDK13Q14004 1512 aaKnown RBP27.51■■■□□ 2
TUBB3-205ENST00000554336 ABCA9Q8IUA7 1624 aa27.45■■□□□ 1.98
TUBB3-205ENST00000554336 CCDC18Q5T9S5 1454 aa27.38■■□□□ 1.97
TUBB3-205ENST00000554336 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
TUBB3-205ENST00000554336 ARAP3Q8WWN8 1544 aa27.37■■□□□ 1.97
TUBB3-205ENST00000554336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
TUBB3-205ENST00000554336 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
TUBB3-205ENST00000554336 TIAM1Q13009 1591 aa27.31■■□□□ 1.96
TUBB3-205ENST00000554336 HECW2Q9P2P5 1572 aa27.25■■□□□ 1.95
TUBB3-205ENST00000554336 NEO1Q92859 1461 aa27.25■■□□□ 1.95
TUBB3-205ENST00000554336 KIF14Q15058 1648 aa27.23■■□□□ 1.95
TUBB3-205ENST00000554336 PHLDB1Q86UU1 1377 aa27.23■■□□□ 1.95
TUBB3-205ENST00000554336 FRMPD1Q5SYB0 1578 aa27.23■■□□□ 1.95
TUBB3-205ENST00000554336 RAPGEF3O95398 923 aa27.23■■□□□ 1.95
TUBB3-205ENST00000554336 MAP3K1Q13233 1512 aa27.22■■□□□ 1.95
TUBB3-205ENST00000554336 TROQ12816 1431 aaPredicted RBP27.21■■□□□ 1.95
TUBB3-205ENST00000554336 PLEKHD1A6NEE1 506 aa27.18■■□□□ 1.94
TUBB3-205ENST00000554336 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
TUBB3-205ENST00000554336 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
TUBB3-205ENST00000554336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.17■■□□□ 1.94
TUBB3-205ENST00000554336 LRRC9Q6ZRR7 1453 aa27.13■■□□□ 1.93
TUBB3-205ENST00000554336 RICTORQ6R327 1708 aa27.13■■□□□ 1.93
TUBB3-205ENST00000554336 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
TUBB3-205ENST00000554336 ADAMTSL3P82987 1691 aa27.11■■□□□ 1.93
TUBB3-205ENST00000554336 FANCAO15360 1455 aa27.1■■□□□ 1.93
TUBB3-205ENST00000554336 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms