RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 NISCHQ9Y2I1 1504 aa41.31■■■■■ 4.2
TUBB3-205ENST00000554336 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
TUBB3-205ENST00000554336 ABCC9O60706 1549 aa36.85■■■■□ 3.49
TUBB3-205ENST00000554336 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
TUBB3-205ENST00000554336 NACADO15069 1562 aa34.79■■■■□ 3.16
TUBB3-205ENST00000554336 DCAF8L2P0C7V8 631 aa34.62■■■■□ 3.13
TUBB3-205ENST00000554336 ZCCHC6Q5VYS8 1495 aaKnown RBP34.56■■■■□ 3.12
TUBB3-205ENST00000554336 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
TUBB3-205ENST00000554336 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
TUBB3-205ENST00000554336 PABPN1Q86U42 306 aaKnown RBP eCLIP34.29■■■■□ 3.08
TUBB3-205ENST00000554336 MYO15BQ96JP2 1530 aa34.29■■■■□ 3.08
TUBB3-205ENST00000554336 DCAF1Q9Y4B6 1507 aa34.19■■■■□ 3.06
TUBB3-205ENST00000554336 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
TUBB3-205ENST00000554336 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
TUBB3-205ENST00000554336 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
TUBB3-205ENST00000554336 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
TUBB3-205ENST00000554336 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
TUBB3-205ENST00000554336 CECR2Q9BXF3 1484 aa33.16■■■□□ 2.9
TUBB3-205ENST00000554336 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
TUBB3-205ENST00000554336 SMARCA4P51532 1647 aa32.05■■■□□ 2.72
TUBB3-205ENST00000554336 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
TUBB3-205ENST00000554336 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
TUBB3-205ENST00000554336 SMARCA2P51531 1590 aa31.94■■■□□ 2.7
TUBB3-205ENST00000554336 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
TUBB3-205ENST00000554336 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
TUBB3-205ENST00000554336 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
TUBB3-205ENST00000554336 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
TUBB3-205ENST00000554336 PEG3Q9GZU2 1588 aa31.71■■■□□ 2.67
TUBB3-205ENST00000554336 NESP48681 1621 aa31.69■■■□□ 2.66
TUBB3-205ENST00000554336 CUX2O14529 1486 aa31.69■■■□□ 2.66
TUBB3-205ENST00000554336 DNAJC5Q9H3Z4 198 aa31.64■■■□□ 2.66
TUBB3-205ENST00000554336 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
TUBB3-205ENST00000554336 WIZO95785 1651 aa31.6■■■□□ 2.65
TUBB3-205ENST00000554336 LAMC3Q9Y6N6 1575 aa31.41■■■□□ 2.62
TUBB3-205ENST00000554336 THOC2Q8NI27 1593 aaKnown RBP31.36■■■□□ 2.61
TUBB3-205ENST00000554336 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
TUBB3-205ENST00000554336 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
TUBB3-205ENST00000554336 PDS5BQ9NTI5 1447 aa31.18■■■□□ 2.58
TUBB3-205ENST00000554336 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
TUBB3-205ENST00000554336 SUPT5HO00267 1087 aaKnown RBP31.07■■■□□ 2.56
TUBB3-205ENST00000554336 MRC2Q9UBG0 1479 aa30.95■■■□□ 2.55
TUBB3-205ENST00000554336 WDR62O43379 1518 aa30.9■■■□□ 2.54
TUBB3-205ENST00000554336 CCDC88BA6NC98 1476 aa30.83■■■□□ 2.53
TUBB3-205ENST00000554336 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
TUBB3-205ENST00000554336 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
TUBB3-205ENST00000554336 CFTRP13569 1480 aa30.8■■■□□ 2.52
TUBB3-205ENST00000554336 URB2Q14146 1524 aaKnown RBP30.59■■■□□ 2.49
TUBB3-205ENST00000554336 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
TUBB3-205ENST00000554336 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
TUBB3-205ENST00000554336 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
TUBB3-205ENST00000554336 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
TUBB3-205ENST00000554336 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
TUBB3-205ENST00000554336 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
TUBB3-205ENST00000554336 DNMBPQ6XZF7 1577 aa30.13■■■□□ 2.41
TUBB3-205ENST00000554336 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
TUBB3-205ENST00000554336 EIF4G3O43432 1585 aaKnown RBP30.07■■■□□ 2.4
TUBB3-205ENST00000554336 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
TUBB3-205ENST00000554336 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
TUBB3-205ENST00000554336 RIMBP3CA6NJZ7 1639 aa29.93■■■□□ 2.38
TUBB3-205ENST00000554336 RIMBP3BA6NNM3 1639 aa29.93■■■□□ 2.38
TUBB3-205ENST00000554336 RIMBP3Q9UFD9 1639 aa29.93■■■□□ 2.38
TUBB3-205ENST00000554336 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.38
TUBB3-205ENST00000554336 CUX1P39880 1505 aa29.89■■■□□ 2.38
TUBB3-205ENST00000554336 CHD1O14646 1710 aa29.88■■■□□ 2.37
TUBB3-205ENST00000554336 RAD54L2Q9Y4B4 1467 aa29.85■■■□□ 2.37
TUBB3-205ENST00000554336 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
TUBB3-205ENST00000554336 ARHGEF11O15085 1522 aa29.81■■■□□ 2.36
TUBB3-205ENST00000554336 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
TUBB3-205ENST00000554336 BIVM-ERCC5R4GMW8 1640 aa29.77■■■□□ 2.36
TUBB3-205ENST00000554336 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
TUBB3-205ENST00000554336 SOGA1O94964 1423 aa29.76■■■□□ 2.35
TUBB3-205ENST00000554336 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
TUBB3-205ENST00000554336 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
TUBB3-205ENST00000554336 FBLN2P98095 1184 aa29.68■■■□□ 2.34
TUBB3-205ENST00000554336 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
TUBB3-205ENST00000554336 SNAPC4Q5SXM2 1469 aa29.62■■■□□ 2.33
TUBB3-205ENST00000554336 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
TUBB3-205ENST00000554336 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
TUBB3-205ENST00000554336 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
TUBB3-205ENST00000554336 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
TUBB3-205ENST00000554336 PBRM1Q86U86 1689 aa29.49■■■□□ 2.31
TUBB3-205ENST00000554336 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
TUBB3-205ENST00000554336 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
TUBB3-205ENST00000554336 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
TUBB3-205ENST00000554336 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
TUBB3-205ENST00000554336 ABCA5Q8WWZ7 1642 aa29.4■■■□□ 2.3
TUBB3-205ENST00000554336 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
TUBB3-205ENST00000554336 CHIC1Q5VXU3 224 aa29.31■■■□□ 2.28
TUBB3-205ENST00000554336 TRHP20396 242 aaPredicted RBP29.21■■■□□ 2.27
TUBB3-205ENST00000554336 ADAMTS12P58397 1594 aa29.17■■■□□ 2.26
TUBB3-205ENST00000554336 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
TUBB3-205ENST00000554336 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
TUBB3-205ENST00000554336 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
TUBB3-205ENST00000554336 KIF27Q86VH2 1401 aa29.08■■■□□ 2.25
TUBB3-205ENST00000554336 ERCC6L2Q5T890 1561 aa29.07■■■□□ 2.24
TUBB3-205ENST00000554336 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
TUBB3-205ENST00000554336 NUP160Q12769 1436 aa29.03■■■□□ 2.24
TUBB3-205ENST00000554336 FHAD1B1AJZ9 1412 aa29.02■■■□□ 2.24
TUBB3-205ENST00000554336 SHROOM2Q13796 1616 aa28.95■■■□□ 2.23
TUBB3-205ENST00000554336 IGF1RP08069 1367 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms