RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 FBLN2P98095 1184 aa21.93■■□□□ 1.1
ACTR6-213ENST00000553038 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
ACTR6-213ENST00000553038 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
ACTR6-213ENST00000553038 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
ACTR6-213ENST00000553038 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
ACTR6-213ENST00000553038 ARAP1Q96P48 1450 aa21.88■■□□□ 1.09
ACTR6-213ENST00000553038 P3H3Q8IVL6 736 aa21.87■■□□□ 1.09
ACTR6-213ENST00000553038 APLP2Q06481 763 aa21.86■■□□□ 1.09
ACTR6-213ENST00000553038 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
ACTR6-213ENST00000553038 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
ACTR6-213ENST00000553038 GRIN2AQ12879 1464 aa21.84■■□□□ 1.09
ACTR6-213ENST00000553038 EFCAB5A4FU69 1503 aa21.79■■□□□ 1.08
ACTR6-213ENST00000553038 IQGAP2Q13576 1575 aa21.77■■□□□ 1.08
ACTR6-213ENST00000553038 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
ACTR6-213ENST00000553038 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
ACTR6-213ENST00000553038 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
ACTR6-213ENST00000553038 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
ACTR6-213ENST00000553038 SAMD9Q5K651 1589 aa21.68■■□□□ 1.06
ACTR6-213ENST00000553038 HRCP23327 699 aa21.66■■□□□ 1.06
ACTR6-213ENST00000553038 CHD1O14646 1710 aa21.64■■□□□ 1.05
ACTR6-213ENST00000553038 NUP160Q12769 1436 aa21.63■■□□□ 1.05
ACTR6-213ENST00000553038 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
ACTR6-213ENST00000553038 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
ACTR6-213ENST00000553038 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
ACTR6-213ENST00000553038 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
ACTR6-213ENST00000553038 FYCO1Q9BQS8 1478 aa21.55■■□□□ 1.04
ACTR6-213ENST00000553038 CASKIN1Q8WXD9 1431 aa21.54■■□□□ 1.04
ACTR6-213ENST00000553038 KIAA0556O60303 1618 aa21.54■■□□□ 1.04
ACTR6-213ENST00000553038 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
ACTR6-213ENST00000553038 CARMIL2Q6F5E8 1435 aa21.52■■□□□ 1.04
ACTR6-213ENST00000553038 DISP1Q96F81 1524 aa21.52■■□□□ 1.04
ACTR6-213ENST00000553038 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
ACTR6-213ENST00000553038 MAP3K1Q13233 1512 aa21.45■■□□□ 1.02
ACTR6-213ENST00000553038 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
ACTR6-213ENST00000553038 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
ACTR6-213ENST00000553038 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
ACTR6-213ENST00000553038 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
ACTR6-213ENST00000553038 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
ACTR6-213ENST00000553038 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
ACTR6-213ENST00000553038 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
ACTR6-213ENST00000553038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
ACTR6-213ENST00000553038 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
ACTR6-213ENST00000553038 RAPGEF6Q8TEU7 1601 aa21.34■■□□□ 1.01
ACTR6-213ENST00000553038 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
ACTR6-213ENST00000553038 CLASP1Q7Z460 1538 aa21.33■■□□□ 1.01
ACTR6-213ENST00000553038 SHROOM2Q13796 1616 aa21.32■■□□□ 1
ACTR6-213ENST00000553038 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
ACTR6-213ENST00000553038 PLB1Q6P1J6 1458 aa21.31■■□□□ 1
ACTR6-213ENST00000553038 PTPRGP23470 1445 aa21.3■■□□□ 1
ACTR6-213ENST00000553038 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
ACTR6-213ENST00000553038 OSCARQ8IYS5 282 aa21.27■■□□□ 1
ACTR6-213ENST00000553038 NUP153P49790 1475 aaKnown RBP21.26■□□□□ 0.99
ACTR6-213ENST00000553038 EHBP1L1Q8N3D4 1523 aa21.25■□□□□ 0.99
ACTR6-213ENST00000553038 ERCC6L2Q5T890 1561 aa21.24■□□□□ 0.99
ACTR6-213ENST00000553038 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
ACTR6-213ENST00000553038 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
ACTR6-213ENST00000553038 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
ACTR6-213ENST00000553038 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
ACTR6-213ENST00000553038 ABCA8O94911 1581 aa21.2■□□□□ 0.98
ACTR6-213ENST00000553038 SUPT6HQ7KZ85 1726 aaKnown RBP21.19■□□□□ 0.98
ACTR6-213ENST00000553038 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
ACTR6-213ENST00000553038 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
ACTR6-213ENST00000553038 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
ACTR6-213ENST00000553038 CCER1Q8TC90 406 aaPredicted RBP21.17■□□□□ 0.98
ACTR6-213ENST00000553038 ITGAEP38570 1179 aa21.17■□□□□ 0.98
ACTR6-213ENST00000553038 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
ACTR6-213ENST00000553038 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
ACTR6-213ENST00000553038 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
ACTR6-213ENST00000553038 ATP10BO94823 1461 aa21.09■□□□□ 0.97
ACTR6-213ENST00000553038 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
ACTR6-213ENST00000553038 TROQ12816 1431 aaPredicted RBP21.08■□□□□ 0.96
ACTR6-213ENST00000553038 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.96
ACTR6-213ENST00000553038 ABCC2Q92887 1545 aa21.06■□□□□ 0.96
ACTR6-213ENST00000553038 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
ACTR6-213ENST00000553038 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
ACTR6-213ENST00000553038 KIF14Q15058 1648 aa20.98■□□□□ 0.95
ACTR6-213ENST00000553038 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
ACTR6-213ENST00000553038 UHRF1BP1LA0JNW5 1464 aa20.96■□□□□ 0.95
ACTR6-213ENST00000553038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.95■□□□□ 0.94
ACTR6-213ENST00000553038 ADCY10Q96PN6 1610 aa20.95■□□□□ 0.94
ACTR6-213ENST00000553038 MIA2Q96PC5 1412 aa20.93■□□□□ 0.94
ACTR6-213ENST00000553038 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
ACTR6-213ENST00000553038 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
ACTR6-213ENST00000553038 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
ACTR6-213ENST00000553038 ZNF777Q9ULD5 760 aaPredicted RBP20.9■□□□□ 0.94
ACTR6-213ENST00000553038 ITSN2Q9NZM3 1697 aa20.9■□□□□ 0.94
ACTR6-213ENST00000553038 KDM5BQ9UGL1 1544 aa20.89■□□□□ 0.94
ACTR6-213ENST00000553038 TCOF1Q13428 1488 aaKnown RBP20.88■□□□□ 0.93
ACTR6-213ENST00000553038 NPM1P06748 294 aaKnown RBP eCLIP20.87■□□□□ 0.93
ACTR6-213ENST00000553038 GPATCH8Q9UKJ3 1502 aaKnown RBP20.87■□□□□ 0.93
ACTR6-213ENST00000553038 ZNF644Q9H582 1327 aaPredicted RBP20.85■□□□□ 0.93
ACTR6-213ENST00000553038 ABCC10Q5T3U5 1492 aa20.84■□□□□ 0.93
ACTR6-213ENST00000553038 DHX57Q6P158 1386 aaKnown RBP20.83■□□□□ 0.92
ACTR6-213ENST00000553038 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
ACTR6-213ENST00000553038 SETD5Q9C0A6 1442 aa20.82■□□□□ 0.92
ACTR6-213ENST00000553038 RAB3GAP2Q9H2M9 1393 aa20.81■□□□□ 0.92
ACTR6-213ENST00000553038 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
ACTR6-213ENST00000553038 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
ACTR6-213ENST00000553038 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
ACTR6-213ENST00000553038 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms