RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, human

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCC2-215	ENST00000552931	SHROOM2	Q13796	1616 aa		10.62	□□□□□ -0.71
SMARCC2-215	ENST00000552931	IGF1R	P08069	1367 aa		10.62	□□□□□ -0.71
SMARCC2-215	ENST00000552931	KIF27	Q86VH2	1401 aa		10.6	□□□□□ -0.71
SMARCC2-215	ENST00000552931	CEP170	Q5SW79	1584 aa		10.6	□□□□□ -0.71
SMARCC2-215	ENST00000552931	JPH4	Q96JJ6	628 aa		10.56	□□□□□ -0.72
SMARCC2-215	ENST00000552931	KIAA0586	Q9BVV6	1533 aa		10.55	□□□□□ -0.72
SMARCC2-215	ENST00000552931	CUL7	Q14999	1698 aa		10.55	□□□□□ -0.72
SMARCC2-215	ENST00000552931	CARMIL1	Q5VZK9	1371 aa		10.52	□□□□□ -0.73
SMARCC2-215	ENST00000552931	RUSC2	Q8N2Y8	1516 aa		10.51	□□□□□ -0.73
SMARCC2-215	ENST00000552931	ERCC6L2	Q5T890	1561 aa		10.5	□□□□□ -0.73
SMARCC2-215	ENST00000552931	PRG4	Q92954	1404 aa	Predicted RBP	10.5	□□□□□ -0.73
SMARCC2-215	ENST00000552931	CSRNP3	Q8WYN3	585 aa		10.45	□□□□□ -0.74
SMARCC2-215	ENST00000552931	MAPKBP1	O60336	1514 aa		10.43	□□□□□ -0.74
SMARCC2-215	ENST00000552931	RAPGEF2	Q9Y4G8	1499 aa		10.42	□□□□□ -0.74
SMARCC2-215	ENST00000552931	SENP3	Q9H4L4	574 aa	Predicted RBP	10.42	□□□□□ -0.74
SMARCC2-215	ENST00000552931	CARMIL2	Q6F5E8	1435 aa		10.41	□□□□□ -0.74
SMARCC2-215	ENST00000552931	UGGT2	Q9NYU1	1516 aa		10.4	□□□□□ -0.74
SMARCC2-215	ENST00000552931	UHRF1BP1L	A0JNW5	1464 aa		10.4	□□□□□ -0.74
SMARCC2-215	ENST00000552931	PRX	Q9BXM0	1461 aa		10.4	□□□□□ -0.74
SMARCC2-215	ENST00000552931	TNIK	Q9UKE5	1360 aa		10.39	□□□□□ -0.75
SMARCC2-215	ENST00000552931	ABCC10	Q5T3U5	1492 aa		10.39	□□□□□ -0.75
SMARCC2-215	ENST00000552931	IQGAP2	Q13576	1575 aa		10.39	□□□□□ -0.75
SMARCC2-215	ENST00000552931	PTPRG	P23470	1445 aa		10.38	□□□□□ -0.75
SMARCC2-215	ENST00000552931	ILDR1	Q86SU0	546 aa	Predicted RBP	10.37	□□□□□ -0.75
SMARCC2-215	ENST00000552931	DISP1	Q96F81	1524 aa		10.37	□□□□□ -0.75
SMARCC2-215	ENST00000552931	ADCY10	Q96PN6	1610 aa		10.36	□□□□□ -0.75
SMARCC2-215	ENST00000552931	NPM1	P06748	294 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
SMARCC2-215	ENST00000552931	EEA1	Q15075	1411 aa		10.34	□□□□□ -0.75
SMARCC2-215	ENST00000552931	ABCC2	Q92887	1545 aa		10.34	□□□□□ -0.75
SMARCC2-215	ENST00000552931	KDM5B	Q9UGL1	1544 aa		10.33	□□□□□ -0.76
SMARCC2-215	ENST00000552931	UACA	Q9BZF9	1416 aa		10.33	□□□□□ -0.76
SMARCC2-215	ENST00000552931	ADRA2B	P18089	450 aa		10.32	□□□□□ -0.76
SMARCC2-215	ENST00000552931	KIF13A	Q9H1H9	1805 aa		10.32	□□□□□ -0.76
SMARCC2-215	ENST00000552931	GOLGA3	Q08378	1498 aa		10.3	□□□□□ -0.76
SMARCC2-215	ENST00000552931	PLB1	Q6P1J6	1458 aa		10.3	□□□□□ -0.76
SMARCC2-215	ENST00000552931	GLI2	P10070	1586 aa		10.3	□□□□□ -0.76
SMARCC2-215	ENST00000552931	DIP2B	Q9P265	1576 aa		10.3	□□□□□ -0.76
SMARCC2-215	ENST00000552931	KIAA0556	O60303	1618 aa		10.28	□□□□□ -0.76
SMARCC2-215	ENST00000552931	FAM69C	Q0P6D2	419 aa		10.27	□□□□□ -0.77
SMARCC2-215	ENST00000552931	KDM4F	A0A1W2PPD8	638 aa		10.26	□□□□□ -0.77
SMARCC2-215	ENST00000552931	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.26	□□□□□ -0.77
SMARCC2-215	ENST00000552931	CTTNBP2	Q8WZ74	1663 aa		10.25	□□□□□ -0.77
SMARCC2-215	ENST00000552931	ASXL2	Q76L83	1435 aa		10.24	□□□□□ -0.77
SMARCC2-215	ENST00000552931	ABCA8	O94911	1581 aa		10.22	□□□□□ -0.77
SMARCC2-215	ENST00000552931	EPRS	P07814	1512 aa	Known RBP	10.21	□□□□□ -0.78
SMARCC2-215	ENST00000552931	KDM6B	O15054	1643 aa		10.2	□□□□□ -0.78
SMARCC2-215	ENST00000552931	SAMD9	Q5K651	1589 aa		10.19	□□□□□ -0.78
SMARCC2-215	ENST00000552931	WDR7	Q9Y4E6	1490 aa		10.18	□□□□□ -0.78
SMARCC2-215	ENST00000552931	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.18	□□□□□ -0.78
SMARCC2-215	ENST00000552931	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.18	□□□□□ -0.78
SMARCC2-215	ENST00000552931	MAP3K4	Q9Y6R4	1608 aa		10.18	□□□□□ -0.78
SMARCC2-215	ENST00000552931	RTN4	Q9NQC3	1192 aa	Known RBP	10.17	□□□□□ -0.78
SMARCC2-215	ENST00000552931	KIF21B	O75037	1637 aa		10.17	□□□□□ -0.78
SMARCC2-215	ENST00000552931	MAGI3	Q5TCQ9	1506 aa		10.17	□□□□□ -0.78
SMARCC2-215	ENST00000552931	TEX14	Q8IWB6	1497 aa		10.17	□□□□□ -0.78
SMARCC2-215	ENST00000552931	PHLDB1	Q86UU1	1377 aa		10.16	□□□□□ -0.78
SMARCC2-215	ENST00000552931	PPRC1	Q5VV67	1664 aa	Known RBP	10.16	□□□□□ -0.78
SMARCC2-215	ENST00000552931	ATP10B	O94823	1461 aa		10.14	□□□□□ -0.79
SMARCC2-215	ENST00000552931	EFCAB5	A4FU69	1503 aa		10.13	□□□□□ -0.79
SMARCC2-215	ENST00000552931	CFAP43	Q8NDM7	1665 aa		10.12	□□□□□ -0.79
SMARCC2-215	ENST00000552931	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.1	□□□□□ -0.79
SMARCC2-215	ENST00000552931	TSPOAP1	O95153	1857 aa		10.1	□□□□□ -0.79
SMARCC2-215	ENST00000552931	CD109	Q6YHK3	1445 aa		10.1	□□□□□ -0.79
SMARCC2-215	ENST00000552931	ARAP3	Q8WWN8	1544 aa		10.1	□□□□□ -0.79
SMARCC2-215	ENST00000552931	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.09	□□□□□ -0.79
SMARCC2-215	ENST00000552931	NUP153	P49790	1475 aa	Known RBP	10.09	□□□□□ -0.79
SMARCC2-215	ENST00000552931	RAPGEF6	Q8TEU7	1601 aa		10.08	□□□□□ -0.8
SMARCC2-215	ENST00000552931	ABCA9	Q8IUA7	1624 aa		10.07	□□□□□ -0.8
SMARCC2-215	ENST00000552931	ADGRL1	O94910	1474 aa		10.07	□□□□□ -0.8
SMARCC2-215	ENST00000552931	HECW2	Q9P2P5	1572 aa		10.06	□□□□□ -0.8
SMARCC2-215	ENST00000552931	FBXO41	Q8TF61	875 aa		10.06	□□□□□ -0.8
SMARCC2-215	ENST00000552931	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.06	□□□□□ -0.8
SMARCC2-215	ENST00000552931	NEO1	Q92859	1461 aa		10.05	□□□□□ -0.8
SMARCC2-215	ENST00000552931	FMN1	Q68DA7	1419 aa		10.05	□□□□□ -0.8
SMARCC2-215	ENST00000552931	FHOD3	Q2V2M9	1422 aa		10.02	□□□□□ -0.81
SMARCC2-215	ENST00000552931	PLEKHD1	A6NEE1	506 aa		10.02	□□□□□ -0.81
SMARCC2-215	ENST00000552931	ARHGAP35	Q9NRY4	1499 aa		10.02	□□□□□ -0.81
SMARCC2-215	ENST00000552931	P3H3	Q8IVL6	736 aa		10.01	□□□□□ -0.81
SMARCC2-215	ENST00000552931	KCNH8	Q96L42	1107 aa		10.01	□□□□□ -0.81
SMARCC2-215	ENST00000552931	UBTF	P17480	764 aa	Known RBP	9.97	□□□□□ -0.81
SMARCC2-215	ENST00000552931	PPP6R1	Q9UPN7	881 aa		9.97	□□□□□ -0.81
SMARCC2-215	ENST00000552931	CDK11A	Q9UQ88	783 aa	Predicted RBP	9.97	□□□□□ -0.81
SMARCC2-215	ENST00000552931	PLCH2	O75038	1416 aa		9.96	□□□□□ -0.82
SMARCC2-215	ENST00000552931	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	9.96	□□□□□ -0.82
SMARCC2-215	ENST00000552931	MAGI2	Q86UL8	1455 aa		9.95	□□□□□ -0.82
SMARCC2-215	ENST00000552931	HECW1	Q76N89	1606 aa		9.94	□□□□□ -0.82
SMARCC2-215	ENST00000552931	CASKIN1	Q8WXD9	1431 aa		9.94	□□□□□ -0.82
SMARCC2-215	ENST00000552931	CFAP74	Q9C0B2	1584 aa		9.93	□□□□□ -0.82
SMARCC2-215	ENST00000552931	TRO	Q12816	1431 aa	Predicted RBP	9.93	□□□□□ -0.82
SMARCC2-215	ENST00000552931	AKNA	Q7Z591	1439 aa		9.93	□□□□□ -0.82
SMARCC2-215	ENST00000552931	ZMYM4	Q5VZL5	1548 aa		9.92	□□□□□ -0.82
SMARCC2-215	ENST00000552931	FANCA	O15360	1455 aa		9.92	□□□□□ -0.82
SMARCC2-215	ENST00000552931	DENND4B	O75064	1496 aa	Predicted RBP	9.91	□□□□□ -0.82
SMARCC2-215	ENST00000552931	CCDC18	Q5T9S5	1454 aa		9.91	□□□□□ -0.82
SMARCC2-215	ENST00000552931	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.91	□□□□□ -0.82
SMARCC2-215	ENST00000552931	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.91	□□□□□ -0.82
SMARCC2-215	ENST00000552931	FRMPD1	Q5SYB0	1578 aa		9.91	□□□□□ -0.82
SMARCC2-215	ENST00000552931	CDK13	Q14004	1512 aa	Known RBP	9.89	□□□□□ -0.83
SMARCC2-215	ENST00000552931	RAPGEF3	O95398	923 aa		9.89	□□□□□ -0.83
SMARCC2-215	ENST00000552931	EFCAB2	Q5VUJ9	269 aa		9.89	□□□□□ -0.83

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