RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 ARHGAP35Q9NRY4 1499 aa18.24■□□□□ 0.51
TROAP-215ENST00000551245 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
TROAP-215ENST00000551245 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
TROAP-215ENST00000551245 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.49
TROAP-215ENST00000551245 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
TROAP-215ENST00000551245 SAMD9Q5K651 1589 aa18.11■□□□□ 0.49
TROAP-215ENST00000551245 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
TROAP-215ENST00000551245 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
TROAP-215ENST00000551245 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
TROAP-215ENST00000551245 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
TROAP-215ENST00000551245 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
TROAP-215ENST00000551245 KIAA0586Q9BVV6 1533 aa18.02■□□□□ 0.47
TROAP-215ENST00000551245 APLP2Q06481 763 aa18.02■□□□□ 0.47
TROAP-215ENST00000551245 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
TROAP-215ENST00000551245 FHOD3Q2V2M9 1422 aa17.99■□□□□ 0.47
TROAP-215ENST00000551245 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
TROAP-215ENST00000551245 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
TROAP-215ENST00000551245 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
TROAP-215ENST00000551245 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
TROAP-215ENST00000551245 NUP160Q12769 1436 aa17.96■□□□□ 0.47
TROAP-215ENST00000551245 CASKIN1Q8WXD9 1431 aa17.96■□□□□ 0.47
TROAP-215ENST00000551245 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
TROAP-215ENST00000551245 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
TROAP-215ENST00000551245 CHMP7Q8WUX9 453 aaPredicted RBP17.94■□□□□ 0.46
TROAP-215ENST00000551245 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
TROAP-215ENST00000551245 KIAA0556O60303 1618 aa17.89■□□□□ 0.45
TROAP-215ENST00000551245 DISP1Q96F81 1524 aa17.88■□□□□ 0.45
TROAP-215ENST00000551245 CHD1O14646 1710 aa17.88■□□□□ 0.45
TROAP-215ENST00000551245 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
TROAP-215ENST00000551245 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
TROAP-215ENST00000551245 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
TROAP-215ENST00000551245 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
TROAP-215ENST00000551245 FBLN2P98095 1184 aa17.82■□□□□ 0.44
TROAP-215ENST00000551245 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
TROAP-215ENST00000551245 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
TROAP-215ENST00000551245 RRBP1Q9P2E9 1410 aaKnown RBP17.77■□□□□ 0.43
TROAP-215ENST00000551245 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
TROAP-215ENST00000551245 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
TROAP-215ENST00000551245 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
TROAP-215ENST00000551245 RAPGEF6Q8TEU7 1601 aa17.72■□□□□ 0.43
TROAP-215ENST00000551245 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
TROAP-215ENST00000551245 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
TROAP-215ENST00000551245 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
TROAP-215ENST00000551245 CLASP1Q7Z460 1538 aa17.68■□□□□ 0.42
TROAP-215ENST00000551245 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
TROAP-215ENST00000551245 SUPT6HQ7KZ85 1726 aaKnown RBP17.66■□□□□ 0.42
TROAP-215ENST00000551245 NUP153P49790 1475 aaKnown RBP17.66■□□□□ 0.42
TROAP-215ENST00000551245 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
TROAP-215ENST00000551245 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
TROAP-215ENST00000551245 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
TROAP-215ENST00000551245 MAGI3Q5TCQ9 1506 aa17.64■□□□□ 0.41
TROAP-215ENST00000551245 ABCA8O94911 1581 aa17.64■□□□□ 0.41
TROAP-215ENST00000551245 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
TROAP-215ENST00000551245 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
TROAP-215ENST00000551245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
TROAP-215ENST00000551245 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
TROAP-215ENST00000551245 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
TROAP-215ENST00000551245 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
TROAP-215ENST00000551245 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
TROAP-215ENST00000551245 PTPRGP23470 1445 aa17.55■□□□□ 0.4
TROAP-215ENST00000551245 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
TROAP-215ENST00000551245 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
TROAP-215ENST00000551245 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.4
TROAP-215ENST00000551245 ADCY10Q96PN6 1610 aa17.52■□□□□ 0.4
TROAP-215ENST00000551245 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
TROAP-215ENST00000551245 TROQ12816 1431 aaPredicted RBP17.49■□□□□ 0.39
TROAP-215ENST00000551245 ATP10BO94823 1461 aa17.48■□□□□ 0.39
TROAP-215ENST00000551245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
TROAP-215ENST00000551245 UACAQ9BZF9 1416 aa17.48■□□□□ 0.39
TROAP-215ENST00000551245 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
TROAP-215ENST00000551245 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
TROAP-215ENST00000551245 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
TROAP-215ENST00000551245 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
TROAP-215ENST00000551245 ABCC2Q92887 1545 aa17.45■□□□□ 0.38
TROAP-215ENST00000551245 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
TROAP-215ENST00000551245 UHRF1BP1LA0JNW5 1464 aa17.43■□□□□ 0.38
TROAP-215ENST00000551245 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
TROAP-215ENST00000551245 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
TROAP-215ENST00000551245 KIF14Q15058 1648 aa17.4■□□□□ 0.38
TROAP-215ENST00000551245 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
TROAP-215ENST00000551245 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
TROAP-215ENST00000551245 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
TROAP-215ENST00000551245 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
TROAP-215ENST00000551245 ITGAEP38570 1179 aa17.35■□□□□ 0.37
TROAP-215ENST00000551245 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
TROAP-215ENST00000551245 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
TROAP-215ENST00000551245 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
TROAP-215ENST00000551245 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
TROAP-215ENST00000551245 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.37
TROAP-215ENST00000551245 PTPRKQ15262 1439 aa17.33■□□□□ 0.37
TROAP-215ENST00000551245 RAB3GAP2Q9H2M9 1393 aa17.32■□□□□ 0.36
TROAP-215ENST00000551245 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
TROAP-215ENST00000551245 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
TROAP-215ENST00000551245 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
TROAP-215ENST00000551245 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
TROAP-215ENST00000551245 AKNAQ7Z591 1439 aa17.29■□□□□ 0.36
TROAP-215ENST00000551245 GCC2Q8IWJ2 1684 aa17.28■□□□□ 0.36
TROAP-215ENST00000551245 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
TROAP-215ENST00000551245 CAMSAP2Q08AD1 1489 aa17.27■□□□□ 0.35
TROAP-215ENST00000551245 PREX2Q70Z35 1606 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms