RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
TROAP-215ENST00000551245 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
TROAP-215ENST00000551245 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
TROAP-215ENST00000551245 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
TROAP-215ENST00000551245 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
TROAP-215ENST00000551245 ABCC9O60706 1549 aa21.57■■□□□ 1.04
TROAP-215ENST00000551245 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
TROAP-215ENST00000551245 NACADO15069 1562 aa21.41■■□□□ 1.02
TROAP-215ENST00000551245 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
TROAP-215ENST00000551245 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
TROAP-215ENST00000551245 SCRIBQ14160 1630 aa21.08■□□□□ 0.96
TROAP-215ENST00000551245 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
TROAP-215ENST00000551245 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
TROAP-215ENST00000551245 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
TROAP-215ENST00000551245 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
TROAP-215ENST00000551245 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
TROAP-215ENST00000551245 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
TROAP-215ENST00000551245 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
TROAP-215ENST00000551245 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
TROAP-215ENST00000551245 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
TROAP-215ENST00000551245 WIZO95785 1651 aa20.19■□□□□ 0.82
TROAP-215ENST00000551245 PEG3Q9GZU2 1588 aa20.07■□□□□ 0.8
TROAP-215ENST00000551245 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
TROAP-215ENST00000551245 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
TROAP-215ENST00000551245 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
TROAP-215ENST00000551245 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.78
TROAP-215ENST00000551245 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.76
TROAP-215ENST00000551245 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
TROAP-215ENST00000551245 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.75
TROAP-215ENST00000551245 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
TROAP-215ENST00000551245 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
TROAP-215ENST00000551245 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
TROAP-215ENST00000551245 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
TROAP-215ENST00000551245 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
TROAP-215ENST00000551245 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
TROAP-215ENST00000551245 CFTRP13569 1480 aa19.31■□□□□ 0.68
TROAP-215ENST00000551245 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
TROAP-215ENST00000551245 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
TROAP-215ENST00000551245 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
TROAP-215ENST00000551245 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
TROAP-215ENST00000551245 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
TROAP-215ENST00000551245 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.64
TROAP-215ENST00000551245 EEA1Q15075 1411 aa19.04■□□□□ 0.64
TROAP-215ENST00000551245 CUX1P39880 1505 aa19.03■□□□□ 0.64
TROAP-215ENST00000551245 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
TROAP-215ENST00000551245 SOGA1O94964 1423 aa18.98■□□□□ 0.63
TROAP-215ENST00000551245 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
TROAP-215ENST00000551245 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
TROAP-215ENST00000551245 NESP48681 1621 aa18.97■□□□□ 0.63
TROAP-215ENST00000551245 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
TROAP-215ENST00000551245 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
TROAP-215ENST00000551245 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
TROAP-215ENST00000551245 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
TROAP-215ENST00000551245 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
TROAP-215ENST00000551245 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
TROAP-215ENST00000551245 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
TROAP-215ENST00000551245 KIF21BO75037 1637 aa18.8■□□□□ 0.6
TROAP-215ENST00000551245 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
TROAP-215ENST00000551245 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
TROAP-215ENST00000551245 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
TROAP-215ENST00000551245 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
TROAP-215ENST00000551245 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
TROAP-215ENST00000551245 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
TROAP-215ENST00000551245 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
TROAP-215ENST00000551245 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
TROAP-215ENST00000551245 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
TROAP-215ENST00000551245 PRXQ9BXM0 1461 aa18.66■□□□□ 0.58
TROAP-215ENST00000551245 CUX2O14529 1486 aa18.66■□□□□ 0.58
TROAP-215ENST00000551245 WDR97A6NE52 1622 aa18.65■□□□□ 0.58
TROAP-215ENST00000551245 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
TROAP-215ENST00000551245 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
TROAP-215ENST00000551245 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
TROAP-215ENST00000551245 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
TROAP-215ENST00000551245 WDR62O43379 1518 aa18.57■□□□□ 0.56
TROAP-215ENST00000551245 IGF1RP08069 1367 aa18.57■□□□□ 0.56
TROAP-215ENST00000551245 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
TROAP-215ENST00000551245 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
TROAP-215ENST00000551245 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
TROAP-215ENST00000551245 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
TROAP-215ENST00000551245 THOC2Q8NI27 1593 aaKnown RBP18.5■□□□□ 0.55
TROAP-215ENST00000551245 CUL7Q14999 1698 aa18.49■□□□□ 0.55
TROAP-215ENST00000551245 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
TROAP-215ENST00000551245 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
TROAP-215ENST00000551245 HRCP23327 699 aa18.46■□□□□ 0.55
TROAP-215ENST00000551245 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
TROAP-215ENST00000551245 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
TROAP-215ENST00000551245 CLIP1P30622 1438 aa18.41■□□□□ 0.54
TROAP-215ENST00000551245 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
TROAP-215ENST00000551245 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
TROAP-215ENST00000551245 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
TROAP-215ENST00000551245 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
TROAP-215ENST00000551245 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.529e-11■■■■■ 62.4
TROAP-215ENST00000551245 VPS8Q8N3P4 1428 aa18.28■□□□□ 0.52
TROAP-215ENST00000551245 ZNF608Q9ULD9 1512 aaPredicted RBP18.27■□□□□ 0.52
TROAP-215ENST00000551245 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
TROAP-215ENST00000551245 EIF4G3O43432 1585 aaKnown RBP18.27■□□□□ 0.51
TROAP-215ENST00000551245 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
TROAP-215ENST00000551245 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
TROAP-215ENST00000551245 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
TROAP-215ENST00000551245 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms