RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 DIP2BQ9P265 1576 aa22.27■■□□□ 1.16
DDX54-206ENST00000549271 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
DDX54-206ENST00000549271 KDM6BO15054 1643 aa22.23■■□□□ 1.15
DDX54-206ENST00000549271 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
DDX54-206ENST00000549271 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
DDX54-206ENST00000549271 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
DDX54-206ENST00000549271 ADCY10Q96PN6 1610 aa22.18■■□□□ 1.14
DDX54-206ENST00000549271 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
DDX54-206ENST00000549271 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
DDX54-206ENST00000549271 TSPOAP1O95153 1857 aa22.14■■□□□ 1.13
DDX54-206ENST00000549271 PPRC1Q5VV67 1664 aaKnown RBP21.96■■□□□ 1.11
DDX54-206ENST00000549271 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
DDX54-206ENST00000549271 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
DDX54-206ENST00000549271 GLI2P10070 1586 aa21.9■■□□□ 1.1
DDX54-206ENST00000549271 HECW2Q9P2P5 1572 aa21.9■■□□□ 1.1
DDX54-206ENST00000549271 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
DDX54-206ENST00000549271 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
DDX54-206ENST00000549271 PTPRGP23470 1445 aa21.85■■□□□ 1.09
DDX54-206ENST00000549271 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
DDX54-206ENST00000549271 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
DDX54-206ENST00000549271 COL17A1Q9UMD9 1497 aaPredicted RBP21.82■■□□□ 1.08
DDX54-206ENST00000549271 CUL7Q14999 1698 aa21.81■■□□□ 1.08
DDX54-206ENST00000549271 IGF1RP08069 1367 aa21.79■■□□□ 1.08
DDX54-206ENST00000549271 MAP3K4Q9Y6R4 1608 aa21.77■■□□□ 1.07
DDX54-206ENST00000549271 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
DDX54-206ENST00000549271 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
DDX54-206ENST00000549271 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
DDX54-206ENST00000549271 EPRSP07814 1512 aaKnown RBP21.71■■□□□ 1.07
DDX54-206ENST00000549271 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
DDX54-206ENST00000549271 TEX14Q8IWB6 1497 aa21.7■■□□□ 1.06
DDX54-206ENST00000549271 KIF27Q86VH2 1401 aa21.68■■□□□ 1.06
DDX54-206ENST00000549271 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
DDX54-206ENST00000549271 KDM5BQ9UGL1 1544 aa21.66■■□□□ 1.06
DDX54-206ENST00000549271 IQGAP2Q13576 1575 aa21.65■■□□□ 1.06
DDX54-206ENST00000549271 ZCCHC11Q5TAX3 1644 aaKnown RBP21.62■■□□□ 1.05
DDX54-206ENST00000549271 DISP1Q96F81 1524 aa21.61■■□□□ 1.05
DDX54-206ENST00000549271 FBXO41Q8TF61 875 aa21.6■■□□□ 1.05
DDX54-206ENST00000549271 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
DDX54-206ENST00000549271 WDR7Q9Y4E6 1490 aa21.52■■□□□ 1.03
DDX54-206ENST00000549271 UGGT2Q9NYU1 1516 aa21.5■■□□□ 1.03
DDX54-206ENST00000549271 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
DDX54-206ENST00000549271 CFAP43Q8NDM7 1665 aa21.49■■□□□ 1.03
DDX54-206ENST00000549271 KIF21BO75037 1637 aa21.48■■□□□ 1.03
DDX54-206ENST00000549271 KIAA0556O60303 1618 aa21.47■■□□□ 1.03
DDX54-206ENST00000549271 CD109Q6YHK3 1445 aa21.44■■□□□ 1.02
DDX54-206ENST00000549271 ADAMTSL3P82987 1691 aa21.37■■□□□ 1.01
DDX54-206ENST00000549271 PTPRMP28827 1452 aa21.36■■□□□ 1.01
DDX54-206ENST00000549271 ARAP3Q8WWN8 1544 aa21.35■■□□□ 1.01
DDX54-206ENST00000549271 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
DDX54-206ENST00000549271 ABCA8O94911 1581 aa21.33■■□□□ 1.01
DDX54-206ENST00000549271 KCNH8Q96L42 1107 aa21.32■■□□□ 1
DDX54-206ENST00000549271 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
DDX54-206ENST00000549271 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
DDX54-206ENST00000549271 BCORL1Q5H9F3 1711 aa21.25■□□□□ 0.99
DDX54-206ENST00000549271 LMTK3Q96Q04 1460 aa21.25■□□□□ 0.99
DDX54-206ENST00000549271 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
DDX54-206ENST00000549271 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
DDX54-206ENST00000549271 PHLDB1Q86UU1 1377 aa21.21■□□□□ 0.99
DDX54-206ENST00000549271 ABCA9Q8IUA7 1624 aa21.2■□□□□ 0.98
DDX54-206ENST00000549271 FRMPD1Q5SYB0 1578 aa21.15■□□□□ 0.98
DDX54-206ENST00000549271 RAPGEF3O95398 923 aa21.14■□□□□ 0.97
DDX54-206ENST00000549271 ATP10BO94823 1461 aa21.13■□□□□ 0.97
DDX54-206ENST00000549271 NEO1Q92859 1461 aa21.13■□□□□ 0.97
DDX54-206ENST00000549271 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
DDX54-206ENST00000549271 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
DDX54-206ENST00000549271 ARHGEF40Q8TER5 1519 aa21.06■□□□□ 0.96
DDX54-206ENST00000549271 CERKQ8TCT0 537 aa21.06■□□□□ 0.96
DDX54-206ENST00000549271 HSPA2P54652 639 aa21.05■□□□□ 0.96
DDX54-206ENST00000549271 ARID3CA6NKF2 412 aa21.04■□□□□ 0.96
DDX54-206ENST00000549271 RICTORQ6R327 1708 aa21.02■□□□□ 0.96
DDX54-206ENST00000549271 ILDR2Q71H61 639 aa21.01■□□□□ 0.95
DDX54-206ENST00000549271 SOCS7O14512 581 aa20.99■□□□□ 0.95
DDX54-206ENST00000549271 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
DDX54-206ENST00000549271 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
DDX54-206ENST00000549271 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
DDX54-206ENST00000549271 DISP3Q9P2K9 1392 aa20.96■□□□□ 0.95
DDX54-206ENST00000549271 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
DDX54-206ENST00000549271 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
DDX54-206ENST00000549271 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
DDX54-206ENST00000549271 FANCAO15360 1455 aa20.94■□□□□ 0.94
DDX54-206ENST00000549271 POGZQ7Z3K3 1410 aa20.93■□□□□ 0.94
DDX54-206ENST00000549271 ZMYM4Q5VZL5 1548 aa20.93■□□□□ 0.94
DDX54-206ENST00000549271 P3H3Q8IVL6 736 aa20.92■□□□□ 0.94
DDX54-206ENST00000549271 SAMD9Q5K651 1589 aa20.92■□□□□ 0.94
DDX54-206ENST00000549271 FER1L4A9Z1Z3 1794 aa20.91■□□□□ 0.94
DDX54-206ENST00000549271 TTC37Q6PGP7 1564 aa20.91■□□□□ 0.94
DDX54-206ENST00000549271 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
DDX54-206ENST00000549271 CFAP74Q9C0B2 1584 aa20.89■□□□□ 0.94
DDX54-206ENST00000549271 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
DDX54-206ENST00000549271 ZFYVE16Q7Z3T8 1539 aa20.88■□□□□ 0.93
DDX54-206ENST00000549271 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
DDX54-206ENST00000549271 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
DDX54-206ENST00000549271 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
DDX54-206ENST00000549271 PREX1Q8TCU6 1659 aa20.86■□□□□ 0.93
DDX54-206ENST00000549271 MAGI2Q86UL8 1455 aa20.84■□□□□ 0.93
DDX54-206ENST00000549271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
DDX54-206ENST00000549271 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
DDX54-206ENST00000549271 STRCQ7RTU9 1775 aa20.84■□□□□ 0.93
DDX54-206ENST00000549271 SPATA31D1Q6ZQQ2 1576 aa20.82■□□□□ 0.92
DDX54-206ENST00000549271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms