RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
DDX54-206ENST00000549271 A8MU10 97 aa4.45□□□□□ -1.7
DDX54-206ENST00000549271 MT1GP13640 62 aa4.42□□□□□ -1.7
DDX54-206ENST00000549271 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
DDX54-206ENST00000549271 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
DDX54-206ENST00000549271 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
DDX54-206ENST00000549271 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
DDX54-206ENST00000549271 MT1MQ8N339 61 aa4.34□□□□□ -1.71
DDX54-206ENST00000549271 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
DDX54-206ENST00000549271 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
DDX54-206ENST00000549271 TNP1P09430 55 aa4.29□□□□□ -1.72
DDX54-206ENST00000549271 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
DDX54-206ENST00000549271 MT1LQ93083 61 aa4.29□□□□□ -1.72
DDX54-206ENST00000549271 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
DDX54-206ENST00000549271 Q1T7F1 81 aa4.26□□□□□ -1.73
DDX54-206ENST00000549271 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
DDX54-206ENST00000549271 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
DDX54-206ENST00000549271 UQCR11O14957 56 aa4.22□□□□□ -1.73
DDX54-206ENST00000549271 V9GYY9 64 aa4.22□□□□□ -1.73
DDX54-206ENST00000549271 PSPHP1O15172 72 aa4.16□□□□□ -1.74
DDX54-206ENST00000549271 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
DDX54-206ENST00000549271 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
DDX54-206ENST00000549271 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
DDX54-206ENST00000549271 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
DDX54-206ENST00000549271 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
DDX54-206ENST00000549271 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
DDX54-206ENST00000549271 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
DDX54-206ENST00000549271 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
DDX54-206ENST00000549271 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
DDX54-206ENST00000549271 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
DDX54-206ENST00000549271 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
DDX54-206ENST00000549271 A6NED7 52 aa4.01□□□□□ -1.77
DDX54-206ENST00000549271 K7ERS5 55 aa4.01□□□□□ -1.77
DDX54-206ENST00000549271 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
DDX54-206ENST00000549271 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
DDX54-206ENST00000549271 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
DDX54-206ENST00000549271 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
DDX54-206ENST00000549271 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
DDX54-206ENST00000549271 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
DDX54-206ENST00000549271 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
DDX54-206ENST00000549271 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
DDX54-206ENST00000549271 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
DDX54-206ENST00000549271 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
DDX54-206ENST00000549271 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
DDX54-206ENST00000549271 ROMO1P60602 79 aa3.79□□□□□ -1.8
DDX54-206ENST00000549271 MT1AP04731 61 aa3.65□□□□□ -1.83
DDX54-206ENST00000549271 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
DDX54-206ENST00000549271 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
DDX54-206ENST00000549271 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
DDX54-206ENST00000549271 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
DDX54-206ENST00000549271 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
DDX54-206ENST00000549271 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
DDX54-206ENST00000549271 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
DDX54-206ENST00000549271 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
DDX54-206ENST00000549271 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
DDX54-206ENST00000549271 MT3P25713 68 aa3.36□□□□□ -1.87
DDX54-206ENST00000549271 H3BS24 57 aa3.3□□□□□ -1.88
DDX54-206ENST00000549271 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
DDX54-206ENST00000549271 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
DDX54-206ENST00000549271 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
DDX54-206ENST00000549271 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
DDX54-206ENST00000549271 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
DDX54-206ENST00000549271 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
DDX54-206ENST00000549271 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
DDX54-206ENST00000549271 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
DDX54-206ENST00000549271 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
DDX54-206ENST00000549271 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
DDX54-206ENST00000549271 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
DDX54-206ENST00000549271 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
DDX54-206ENST00000549271 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
DDX54-206ENST00000549271 NDUFAF8A1L188 74 aa2.57□□□□□ -2
DDX54-206ENST00000549271 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
DDX54-206ENST00000549271 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
DDX54-206ENST00000549271 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
DDX54-206ENST00000549271 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
DDX54-206ENST00000549271 INE1O15225 51 aa2.12□□□□□ -2.07
DDX54-206ENST00000549271 PRM1P04553 51 aa1.94□□□□□ -2.1
DDX54-206ENST00000549271 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms