RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
CIT-218ENST00000546026 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
CIT-218ENST00000546026 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
CIT-218ENST00000546026 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
CIT-218ENST00000546026 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
CIT-218ENST00000546026 KIAA0586Q9BVV6 1533 aa15.92■□□□□ 0.14
CIT-218ENST00000546026 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
CIT-218ENST00000546026 NUP160Q12769 1436 aa15.88■□□□□ 0.13
CIT-218ENST00000546026 SAMD9Q5K651 1589 aa15.87■□□□□ 0.13
CIT-218ENST00000546026 FBLN2P98095 1184 aa15.87■□□□□ 0.13
CIT-218ENST00000546026 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
CIT-218ENST00000546026 CEP170Q5SW79 1584 aa15.86■□□□□ 0.13
CIT-218ENST00000546026 APLP2Q06481 763 aa15.85■□□□□ 0.13
CIT-218ENST00000546026 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
CIT-218ENST00000546026 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
CIT-218ENST00000546026 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
CIT-218ENST00000546026 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
CIT-218ENST00000546026 CHD1O14646 1710 aa15.8■□□□□ 0.12
CIT-218ENST00000546026 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
CIT-218ENST00000546026 CASKIN1Q8WXD9 1431 aa15.77■□□□□ 0.11
CIT-218ENST00000546026 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
CIT-218ENST00000546026 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
CIT-218ENST00000546026 DISP1Q96F81 1524 aa15.75■□□□□ 0.11
CIT-218ENST00000546026 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
CIT-218ENST00000546026 PCGF6Q9BYE7 350 aa15.74■□□□□ 0.11
CIT-218ENST00000546026 KIAA0556O60303 1618 aa15.74■□□□□ 0.11
CIT-218ENST00000546026 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
CIT-218ENST00000546026 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
CIT-218ENST00000546026 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
CIT-218ENST00000546026 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
CIT-218ENST00000546026 KANK4Q5T7N3 995 aaPredicted RBP15.66■□□□□ 0.1
CIT-218ENST00000546026 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
CIT-218ENST00000546026 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
CIT-218ENST00000546026 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
CIT-218ENST00000546026 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
CIT-218ENST00000546026 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
CIT-218ENST00000546026 LRRC9Q6ZRR7 1453 aa15.63■□□□□ 0.09
CIT-218ENST00000546026 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
CIT-218ENST00000546026 CCDC18Q5T9S5 1454 aa15.62■□□□□ 0.09
CIT-218ENST00000546026 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
CIT-218ENST00000546026 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.08
CIT-218ENST00000546026 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
CIT-218ENST00000546026 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
CIT-218ENST00000546026 PTPRGP23470 1445 aa15.56■□□□□ 0.08
CIT-218ENST00000546026 ABCA8O94911 1581 aa15.54■□□□□ 0.08
CIT-218ENST00000546026 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
CIT-218ENST00000546026 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
CIT-218ENST00000546026 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.08
CIT-218ENST00000546026 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
CIT-218ENST00000546026 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
CIT-218ENST00000546026 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
CIT-218ENST00000546026 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
CIT-218ENST00000546026 CDK13Q14004 1512 aaKnown RBP15.49■□□□□ 0.07
CIT-218ENST00000546026 UACAQ9BZF9 1416 aa15.48■□□□□ 0.07
CIT-218ENST00000546026 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
CIT-218ENST00000546026 MAGI3Q5TCQ9 1506 aa15.46■□□□□ 0.07
CIT-218ENST00000546026 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
CIT-218ENST00000546026 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
CIT-218ENST00000546026 ATP10BO94823 1461 aa15.44■□□□□ 0.06
CIT-218ENST00000546026 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
CIT-218ENST00000546026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
CIT-218ENST00000546026 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
CIT-218ENST00000546026 NCOA2Q15596 1464 aa15.43■□□□□ 0.06
CIT-218ENST00000546026 UHRF1BP1LA0JNW5 1464 aa15.42■□□□□ 0.06
CIT-218ENST00000546026 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
CIT-218ENST00000546026 ABCC2Q92887 1545 aa15.42■□□□□ 0.06
CIT-218ENST00000546026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
CIT-218ENST00000546026 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
CIT-218ENST00000546026 PLEKHD1A6NEE1 506 aa15.4■□□□□ 0.06
CIT-218ENST00000546026 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
CIT-218ENST00000546026 FGD6Q6ZV73 1430 aa15.37■□□□□ 0.05
CIT-218ENST00000546026 ADCY10Q96PN6 1610 aa15.36■□□□□ 0.05
CIT-218ENST00000546026 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
CIT-218ENST00000546026 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.05
CIT-218ENST00000546026 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
CIT-218ENST00000546026 TCOF1Q13428 1488 aaKnown RBP15.31■□□□□ 0.04
CIT-218ENST00000546026 KIF14Q15058 1648 aa15.29■□□□□ 0.04
CIT-218ENST00000546026 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
CIT-218ENST00000546026 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
CIT-218ENST00000546026 ABCC10Q5T3U5 1492 aa15.27■□□□□ 0.04
CIT-218ENST00000546026 HRCP23327 699 aa15.27■□□□□ 0.04
CIT-218ENST00000546026 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
CIT-218ENST00000546026 GPATCH8Q9UKJ3 1502 aaKnown RBP15.26■□□□□ 0.03
CIT-218ENST00000546026 ITGAEP38570 1179 aa15.24■□□□□ 0.03
CIT-218ENST00000546026 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
CIT-218ENST00000546026 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
CIT-218ENST00000546026 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CIT-218ENST00000546026 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
CIT-218ENST00000546026 SETD5Q9C0A6 1442 aa15.18■□□□□ 0.02
CIT-218ENST00000546026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.02
CIT-218ENST00000546026 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
CIT-218ENST00000546026 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
CIT-218ENST00000546026 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
CIT-218ENST00000546026 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
CIT-218ENST00000546026 WDR7Q9Y4E6 1490 aa15.17■□□□□ 0.02
CIT-218ENST00000546026 KCNH8Q96L42 1107 aa15.17■□□□□ 0.02
CIT-218ENST00000546026 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
CIT-218ENST00000546026 CAMSAP2Q08AD1 1489 aa15.16■□□□□ 0.02
CIT-218ENST00000546026 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
CIT-218ENST00000546026 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms