RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 EFCAB5A4FU69 1503 aa24.95■■□□□ 1.58
USP5-207ENST00000542371 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
USP5-207ENST00000542371 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
USP5-207ENST00000542371 GRIN2AQ12879 1464 aa24.89■■□□□ 1.58
USP5-207ENST00000542371 TRIM26Q12899 539 aaPredicted RBP24.85■■□□□ 1.57
USP5-207ENST00000542371 IQGAP2Q13576 1575 aa24.83■■□□□ 1.57
USP5-207ENST00000542371 SAMD9Q5K651 1589 aa24.82■■□□□ 1.56
USP5-207ENST00000542371 CHMP7Q8WUX9 453 aaPredicted RBP24.82■■□□□ 1.56
USP5-207ENST00000542371 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
USP5-207ENST00000542371 APLP2Q06481 763 aa24.77■■□□□ 1.56
USP5-207ENST00000542371 UGGT2Q9NYU1 1516 aa24.76■■□□□ 1.55
USP5-207ENST00000542371 NUP160Q12769 1436 aa24.74■■□□□ 1.55
USP5-207ENST00000542371 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
USP5-207ENST00000542371 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
USP5-207ENST00000542371 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.55
USP5-207ENST00000542371 FMN1Q68DA7 1419 aa24.7■■□□□ 1.55
USP5-207ENST00000542371 MAP3K1Q13233 1512 aa24.69■■□□□ 1.54
USP5-207ENST00000542371 FBLN2P98095 1184 aa24.67■■□□□ 1.54
USP5-207ENST00000542371 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
USP5-207ENST00000542371 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
USP5-207ENST00000542371 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
USP5-207ENST00000542371 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
USP5-207ENST00000542371 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
USP5-207ENST00000542371 CHD1O14646 1710 aa24.61■■□□□ 1.53
USP5-207ENST00000542371 KIAA0556O60303 1618 aa24.57■■□□□ 1.52
USP5-207ENST00000542371 DISP1Q96F81 1524 aa24.56■■□□□ 1.52
USP5-207ENST00000542371 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
USP5-207ENST00000542371 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
USP5-207ENST00000542371 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
USP5-207ENST00000542371 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
USP5-207ENST00000542371 KANK4Q5T7N3 995 aaPredicted RBP24.46■■□□□ 1.51
USP5-207ENST00000542371 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.5
USP5-207ENST00000542371 HECW1Q76N89 1606 aa24.44■■□□□ 1.5
USP5-207ENST00000542371 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
USP5-207ENST00000542371 SHROOM2Q13796 1616 aa24.42■■□□□ 1.5
USP5-207ENST00000542371 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
USP5-207ENST00000542371 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
USP5-207ENST00000542371 CLASP1Q7Z460 1538 aa24.37■■□□□ 1.49
USP5-207ENST00000542371 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
USP5-207ENST00000542371 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
USP5-207ENST00000542371 RAPGEF6Q8TEU7 1601 aa24.34■■□□□ 1.49
USP5-207ENST00000542371 EPRSP07814 1512 aaKnown RBP24.31■■□□□ 1.48
USP5-207ENST00000542371 RRBP1Q9P2E9 1410 aaKnown RBP24.28■■□□□ 1.48
USP5-207ENST00000542371 EHBP1L1Q8N3D4 1523 aa24.27■■□□□ 1.48
USP5-207ENST00000542371 MTUS2Q5JR59 1369 aa24.26■■□□□ 1.47
USP5-207ENST00000542371 NUP153P49790 1475 aaKnown RBP24.25■■□□□ 1.47
USP5-207ENST00000542371 ABCA8O94911 1581 aa24.24■■□□□ 1.47
USP5-207ENST00000542371 PTPRGP23470 1445 aa24.23■■□□□ 1.47
USP5-207ENST00000542371 PLB1Q6P1J6 1458 aa24.2■■□□□ 1.47
USP5-207ENST00000542371 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
USP5-207ENST00000542371 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
USP5-207ENST00000542371 CDK13Q14004 1512 aaKnown RBP24.18■■□□□ 1.46
USP5-207ENST00000542371 PHLDB1Q86UU1 1377 aa24.16■■□□□ 1.46
USP5-207ENST00000542371 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
USP5-207ENST00000542371 MAGI3Q5TCQ9 1506 aa24.15■■□□□ 1.46
USP5-207ENST00000542371 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
USP5-207ENST00000542371 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
USP5-207ENST00000542371 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
USP5-207ENST00000542371 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
USP5-207ENST00000542371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.11■■□□□ 1.45
USP5-207ENST00000542371 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
USP5-207ENST00000542371 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
USP5-207ENST00000542371 ATP10BO94823 1461 aa24.06■■□□□ 1.44
USP5-207ENST00000542371 TROQ12816 1431 aaPredicted RBP24.05■■□□□ 1.44
USP5-207ENST00000542371 HRCP23327 699 aa24.05■■□□□ 1.44
USP5-207ENST00000542371 FGD6Q6ZV73 1430 aa24.04■■□□□ 1.44
USP5-207ENST00000542371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
USP5-207ENST00000542371 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
USP5-207ENST00000542371 ABCC2Q92887 1545 aa24.04■■□□□ 1.44
USP5-207ENST00000542371 UHRF1BP1LA0JNW5 1464 aa24.03■■□□□ 1.44
USP5-207ENST00000542371 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
USP5-207ENST00000542371 ADCY10Q96PN6 1610 aa24.01■■□□□ 1.43
USP5-207ENST00000542371 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
USP5-207ENST00000542371 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
USP5-207ENST00000542371 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
USP5-207ENST00000542371 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
USP5-207ENST00000542371 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
USP5-207ENST00000542371 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
USP5-207ENST00000542371 KIF14Q15058 1648 aa23.9■■□□□ 1.42
USP5-207ENST00000542371 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.41
USP5-207ENST00000542371 ITSN2Q9NZM3 1697 aa23.88■■□□□ 1.41
USP5-207ENST00000542371 ABCC10Q5T3U5 1492 aa23.84■■□□□ 1.41
USP5-207ENST00000542371 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
USP5-207ENST00000542371 ITGAEP38570 1179 aa23.82■■□□□ 1.4
USP5-207ENST00000542371 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
USP5-207ENST00000542371 GPATCH8Q9UKJ3 1502 aaKnown RBP23.82■■□□□ 1.4
USP5-207ENST00000542371 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
USP5-207ENST00000542371 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
USP5-207ENST00000542371 CFDP1Q9UEE9 299 aaPredicted RBP23.74■■□□□ 1.39
USP5-207ENST00000542371 PTPRKQ15262 1439 aa23.7■■□□□ 1.38
USP5-207ENST00000542371 DNMT1P26358 1616 aaKnown RBP23.7■■□□□ 1.38
USP5-207ENST00000542371 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
USP5-207ENST00000542371 AKNAQ7Z591 1439 aa23.69■■□□□ 1.38
USP5-207ENST00000542371 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
USP5-207ENST00000542371 PREX2Q70Z35 1606 aa23.68■■□□□ 1.38
USP5-207ENST00000542371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.68■■□□□ 1.385e-6■■■■□ 19.7
USP5-207ENST00000542371 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
USP5-207ENST00000542371 DAPK1P53355 1430 aa23.66■■□□□ 1.38
USP5-207ENST00000542371 CLSPNQ9HAW4 1339 aa23.65■■□□□ 1.38
USP5-207ENST00000542371 WDR7Q9Y4E6 1490 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms