RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 NISCHQ9Y2I1 1504 aa36.23■■■■□ 3.39
USP5-207ENST00000542371 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
USP5-207ENST00000542371 ZCCHC6Q5VYS8 1495 aaKnown RBP30.42■■■□□ 2.46
USP5-207ENST00000542371 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
USP5-207ENST00000542371 ABCC9O60706 1549 aa29.82■■■□□ 2.36
USP5-207ENST00000542371 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.35
USP5-207ENST00000542371 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
USP5-207ENST00000542371 NACADO15069 1562 aa29.52■■■□□ 2.32
USP5-207ENST00000542371 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
USP5-207ENST00000542371 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
USP5-207ENST00000542371 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
USP5-207ENST00000542371 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
USP5-207ENST00000542371 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
USP5-207ENST00000542371 SUPT5HO00267 1087 aaKnown RBP28.22■■■□□ 2.11
USP5-207ENST00000542371 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
USP5-207ENST00000542371 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
USP5-207ENST00000542371 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
USP5-207ENST00000542371 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
USP5-207ENST00000542371 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
USP5-207ENST00000542371 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
USP5-207ENST00000542371 WIZO95785 1651 aa27.68■■■□□ 2.02
USP5-207ENST00000542371 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
USP5-207ENST00000542371 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
USP5-207ENST00000542371 EIF4G1Q04637 1599 aaKnown RBP27.46■■□□□ 1.99
USP5-207ENST00000542371 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
USP5-207ENST00000542371 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
USP5-207ENST00000542371 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
USP5-207ENST00000542371 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
USP5-207ENST00000542371 HMGXB3Q12766 1538 aa27.19■■□□□ 1.94
USP5-207ENST00000542371 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
USP5-207ENST00000542371 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
USP5-207ENST00000542371 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
USP5-207ENST00000542371 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
USP5-207ENST00000542371 CFTRP13569 1480 aa26.58■■□□□ 1.85
USP5-207ENST00000542371 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
USP5-207ENST00000542371 ABCC8Q09428 1581 aa26.48■■□□□ 1.83
USP5-207ENST00000542371 PRDM2Q13029 1718 aa26.48■■□□□ 1.83
USP5-207ENST00000542371 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.82
USP5-207ENST00000542371 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
USP5-207ENST00000542371 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
USP5-207ENST00000542371 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
USP5-207ENST00000542371 TOP2BQ02880 1626 aa26.24■■□□□ 1.79
USP5-207ENST00000542371 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
USP5-207ENST00000542371 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
USP5-207ENST00000542371 NESP48681 1621 aa26.15■■□□□ 1.78
USP5-207ENST00000542371 CUX1P39880 1505 aa26.13■■□□□ 1.77
USP5-207ENST00000542371 EEA1Q15075 1411 aa26.12■■□□□ 1.77
USP5-207ENST00000542371 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
USP5-207ENST00000542371 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
USP5-207ENST00000542371 FAM9AQ8IZU1 332 aaPredicted RBP26.02■■□□□ 1.76
USP5-207ENST00000542371 SOGA1O94964 1423 aa26■■□□□ 1.75
USP5-207ENST00000542371 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
USP5-207ENST00000542371 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
USP5-207ENST00000542371 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.73
USP5-207ENST00000542371 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
USP5-207ENST00000542371 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
USP5-207ENST00000542371 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
USP5-207ENST00000542371 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
USP5-207ENST00000542371 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
USP5-207ENST00000542371 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
USP5-207ENST00000542371 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
USP5-207ENST00000542371 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
USP5-207ENST00000542371 KIF21BO75037 1637 aa25.73■■□□□ 1.71
USP5-207ENST00000542371 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
USP5-207ENST00000542371 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
USP5-207ENST00000542371 CUX2O14529 1486 aa25.67■■□□□ 1.7
USP5-207ENST00000542371 ERCC6Q03468 1493 aa25.62■■□□□ 1.69
USP5-207ENST00000542371 WDR62O43379 1518 aa25.61■■□□□ 1.69
USP5-207ENST00000542371 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
USP5-207ENST00000542371 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
USP5-207ENST00000542371 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
USP5-207ENST00000542371 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
USP5-207ENST00000542371 WDR97A6NE52 1622 aa25.58■■□□□ 1.69
USP5-207ENST00000542371 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
USP5-207ENST00000542371 IGF1RP08069 1367 aa25.53■■□□□ 1.68
USP5-207ENST00000542371 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
USP5-207ENST00000542371 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
USP5-207ENST00000542371 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
USP5-207ENST00000542371 UBTFP17480 764 aaKnown RBP25.49■■□□□ 1.67
USP5-207ENST00000542371 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.67
USP5-207ENST00000542371 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
USP5-207ENST00000542371 CUL7Q14999 1698 aa25.4■■□□□ 1.66
USP5-207ENST00000542371 CARMIL1Q5VZK9 1371 aa25.4■■□□□ 1.66
USP5-207ENST00000542371 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
USP5-207ENST00000542371 CEP162Q5TB80 1403 aa25.39■■□□□ 1.66
USP5-207ENST00000542371 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
USP5-207ENST00000542371 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
USP5-207ENST00000542371 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
USP5-207ENST00000542371 CLIP1P30622 1438 aa25.22■■□□□ 1.63
USP5-207ENST00000542371 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
USP5-207ENST00000542371 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
USP5-207ENST00000542371 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
USP5-207ENST00000542371 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
USP5-207ENST00000542371 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
USP5-207ENST00000542371 CTTNBP2Q8WZ74 1663 aa25.07■■□□□ 1.6
USP5-207ENST00000542371 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
USP5-207ENST00000542371 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
USP5-207ENST00000542371 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
USP5-207ENST00000542371 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
USP5-207ENST00000542371 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms