RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
TMEM50B-210ENST00000542230 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
TMEM50B-210ENST00000542230 FHOD3Q2V2M9 1422 aa26.47■■□□□ 1.83
TMEM50B-210ENST00000542230 CTTNBP2Q8WZ74 1663 aa26.45■■□□□ 1.82
TMEM50B-210ENST00000542230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.82
TMEM50B-210ENST00000542230 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
TMEM50B-210ENST00000542230 FHAD1B1AJZ9 1412 aa26.4■■□□□ 1.82
TMEM50B-210ENST00000542230 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
TMEM50B-210ENST00000542230 HNRNPUL2Q1KMD3 747 aaKnown RBP26.36■■□□□ 1.81
TMEM50B-210ENST00000542230 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
TMEM50B-210ENST00000542230 EIF4G3O43432 1585 aaKnown RBP26.35■■□□□ 1.81
TMEM50B-210ENST00000542230 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
TMEM50B-210ENST00000542230 EFCAB5A4FU69 1503 aa26.3■■□□□ 1.8
TMEM50B-210ENST00000542230 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
TMEM50B-210ENST00000542230 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
TMEM50B-210ENST00000542230 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
TMEM50B-210ENST00000542230 SAMD9Q5K651 1589 aa26.24■■□□□ 1.79
TMEM50B-210ENST00000542230 FBLN2P98095 1184 aa26.19■■□□□ 1.78
TMEM50B-210ENST00000542230 CASKIN1Q8WXD9 1431 aa26.18■■□□□ 1.78
TMEM50B-210ENST00000542230 IQGAP2Q13576 1575 aa26.17■■□□□ 1.78
TMEM50B-210ENST00000542230 ZEB1P37275 1124 aaPredicted RBP26.17■■□□□ 1.78
TMEM50B-210ENST00000542230 LRRC9Q6ZRR7 1453 aa26.16■■□□□ 1.78
TMEM50B-210ENST00000542230 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
TMEM50B-210ENST00000542230 FYCO1Q9BQS8 1478 aa26.14■■□□□ 1.78
TMEM50B-210ENST00000542230 FMN1Q68DA7 1419 aa26.14■■□□□ 1.78
TMEM50B-210ENST00000542230 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
TMEM50B-210ENST00000542230 MAP3K1Q13233 1512 aa26.14■■□□□ 1.78
TMEM50B-210ENST00000542230 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
TMEM50B-210ENST00000542230 RRBP1Q9P2E9 1410 aaKnown RBP26.09■■□□□ 1.77
TMEM50B-210ENST00000542230 CFAP43Q8NDM7 1665 aa26.08■■□□□ 1.77
TMEM50B-210ENST00000542230 PHLDB1Q86UU1 1377 aa26.07■■□□□ 1.76
TMEM50B-210ENST00000542230 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
TMEM50B-210ENST00000542230 KIAA0586Q9BVV6 1533 aa26.06■■□□□ 1.76
TMEM50B-210ENST00000542230 LRRIQ1Q96JM4 1722 aa26.05■■□□□ 1.76
TMEM50B-210ENST00000542230 CCNB3Q8WWL7 1395 aa26.04■■□□□ 1.76
TMEM50B-210ENST00000542230 ITGAEP38570 1179 aa26.04■■□□□ 1.76
TMEM50B-210ENST00000542230 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
TMEM50B-210ENST00000542230 ARID3CA6NKF2 412 aa26.02■■□□□ 1.76
TMEM50B-210ENST00000542230 UGGT2Q9NYU1 1516 aa26.01■■□□□ 1.75
TMEM50B-210ENST00000542230 DISP1Q96F81 1524 aa25.99■■□□□ 1.75
TMEM50B-210ENST00000542230 MTUS2Q5JR59 1369 aa25.92■■□□□ 1.74
TMEM50B-210ENST00000542230 KIAA0556O60303 1618 aa25.91■■□□□ 1.74
TMEM50B-210ENST00000542230 NUP160Q12769 1436 aa25.9■■□□□ 1.74
TMEM50B-210ENST00000542230 FAM50AQ14320 339 aaKnown RBP25.9■■□□□ 1.74
TMEM50B-210ENST00000542230 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
TMEM50B-210ENST00000542230 MAGI3Q5TCQ9 1506 aa25.88■■□□□ 1.73
TMEM50B-210ENST00000542230 CDK13Q14004 1512 aaKnown RBP25.86■■□□□ 1.73
TMEM50B-210ENST00000542230 EPRSP07814 1512 aaKnown RBP25.83■■□□□ 1.73
TMEM50B-210ENST00000542230 HECW1Q76N89 1606 aa25.8■■□□□ 1.72
TMEM50B-210ENST00000542230 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
TMEM50B-210ENST00000542230 CCDC18Q5T9S5 1454 aa25.76■■□□□ 1.71
TMEM50B-210ENST00000542230 FGD6Q6ZV73 1430 aa25.75■■□□□ 1.71
TMEM50B-210ENST00000542230 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
TMEM50B-210ENST00000542230 PLB1Q6P1J6 1458 aa25.74■■□□□ 1.71
TMEM50B-210ENST00000542230 CHD1O14646 1710 aa25.73■■□□□ 1.71
TMEM50B-210ENST00000542230 EHBP1L1Q8N3D4 1523 aa25.72■■□□□ 1.71
TMEM50B-210ENST00000542230 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
TMEM50B-210ENST00000542230 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
TMEM50B-210ENST00000542230 SUPT6HQ7KZ85 1726 aaKnown RBP25.69■■□□□ 1.7
TMEM50B-210ENST00000542230 CARMIL2Q6F5E8 1435 aa25.69■■□□□ 1.7
TMEM50B-210ENST00000542230 RAB3GAP2Q9H2M9 1393 aa25.68■■□□□ 1.7
TMEM50B-210ENST00000542230 MYOM3Q5VTT5 1437 aa25.67■■□□□ 1.7
TMEM50B-210ENST00000542230 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
TMEM50B-210ENST00000542230 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
TMEM50B-210ENST00000542230 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
TMEM50B-210ENST00000542230 SETD5Q9C0A6 1442 aa25.6■■□□□ 1.69
TMEM50B-210ENST00000542230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.6■■□□□ 1.69
TMEM50B-210ENST00000542230 PTPN23Q9H3S7 1636 aa25.54■■□□□ 1.68
TMEM50B-210ENST00000542230 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
TMEM50B-210ENST00000542230 PTPRGP23470 1445 aa25.51■■□□□ 1.67
TMEM50B-210ENST00000542230 ABCA8O94911 1581 aa25.5■■□□□ 1.67
TMEM50B-210ENST00000542230 CHIC2Q9UKJ5 165 aa25.49■■□□□ 1.67
TMEM50B-210ENST00000542230 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
TMEM50B-210ENST00000542230 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
TMEM50B-210ENST00000542230 ATP10BO94823 1461 aa25.46■■□□□ 1.67
TMEM50B-210ENST00000542230 TROQ12816 1431 aaPredicted RBP25.45■■□□□ 1.67
TMEM50B-210ENST00000542230 SHROOM2Q13796 1616 aa25.45■■□□□ 1.66
TMEM50B-210ENST00000542230 TCOF1Q13428 1488 aaKnown RBP25.44■■□□□ 1.66
TMEM50B-210ENST00000542230 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
TMEM50B-210ENST00000542230 KIF14Q15058 1648 aa25.42■■□□□ 1.66
TMEM50B-210ENST00000542230 MAPKBP1O60336 1514 aa25.42■■□□□ 1.66
TMEM50B-210ENST00000542230 RRP7BPQ9NSQ0 103 aa25.41■■□□□ 1.66
TMEM50B-210ENST00000542230 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
TMEM50B-210ENST00000542230 HFM1A2PYH4 1435 aa25.38■■□□□ 1.65
TMEM50B-210ENST00000542230 NAIPQ13075 1403 aa25.38■■□□□ 1.65
TMEM50B-210ENST00000542230 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
TMEM50B-210ENST00000542230 CLASP1Q7Z460 1538 aa25.36■■□□□ 1.65
TMEM50B-210ENST00000542230 SIN3AQ96ST3 1273 aa25.33■■□□□ 1.65
TMEM50B-210ENST00000542230 ZNF777Q9ULD5 760 aaPredicted RBP25.33■■□□□ 1.65
TMEM50B-210ENST00000542230 GPATCH8Q9UKJ3 1502 aaKnown RBP25.33■■□□□ 1.65
TMEM50B-210ENST00000542230 UACAQ9BZF9 1416 aa25.32■■□□□ 1.64
TMEM50B-210ENST00000542230 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
TMEM50B-210ENST00000542230 ADCY10Q96PN6 1610 aa25.27■■□□□ 1.64
TMEM50B-210ENST00000542230 ABCC5O15440 1437 aa25.27■■□□□ 1.64
TMEM50B-210ENST00000542230 NEUROD1Q13562 356 aa25.27■■□□□ 1.64
TMEM50B-210ENST00000542230 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
TMEM50B-210ENST00000542230 DAPK1P53355 1430 aa25.26■■□□□ 1.63
TMEM50B-210ENST00000542230 KDM6BO15054 1643 aa25.26■■□□□ 1.63
TMEM50B-210ENST00000542230 ABCC10Q5T3U5 1492 aa25.24■■□□□ 1.63
TMEM50B-210ENST00000542230 CAMSAP2Q08AD1 1489 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms