RNA–Protein interactions for RNA: ENST00000541012.5

CCAR1-213, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-213ENST00000541012 RANGAP1P46060 587 aaPredicted RBP9.77□□□□□ -0.85
CCAR1-213ENST00000541012 EIF4G3O43432 1585 aaKnown RBP9.76□□□□□ -0.85
CCAR1-213ENST00000541012 APLP2Q06481 763 aa9.76□□□□□ -0.85
CCAR1-213ENST00000541012 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
CCAR1-213ENST00000541012 ADAMTS12P58397 1594 aa9.75□□□□□ -0.85
CCAR1-213ENST00000541012 MAGI1Q96QZ7 1491 aaPredicted RBP9.75□□□□□ -0.85
CCAR1-213ENST00000541012 VPS8Q8N3P4 1428 aa9.75□□□□□ -0.85
CCAR1-213ENST00000541012 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
CCAR1-213ENST00000541012 SNAPC4Q5SXM2 1469 aa9.73□□□□□ -0.85
CCAR1-213ENST00000541012 EFCAB5A4FU69 1503 aa9.72□□□□□ -0.85
CCAR1-213ENST00000541012 TRIM26Q12899 539 aaPredicted RBP9.72□□□□□ -0.85
CCAR1-213ENST00000541012 CHMP7Q8WUX9 453 aaPredicted RBP9.71□□□□□ -0.86
CCAR1-213ENST00000541012 SYNJ2O15056 1496 aa9.69□□□□□ -0.86
CCAR1-213ENST00000541012 ARHGAP35Q9NRY4 1499 aa9.69□□□□□ -0.86
CCAR1-213ENST00000541012 ARAP1Q96P48 1450 aa9.69□□□□□ -0.86
CCAR1-213ENST00000541012 GRIN2AQ12879 1464 aa9.68□□□□□ -0.86
CCAR1-213ENST00000541012 FBLN2P98095 1184 aa9.66□□□□□ -0.86
CCAR1-213ENST00000541012 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
CCAR1-213ENST00000541012 SENP3Q9H4L4 574 aaPredicted RBP9.66□□□□□ -0.86
CCAR1-213ENST00000541012 PCGF6Q9BYE7 350 aa9.65□□□□□ -0.86
CCAR1-213ENST00000541012 KIAA0586Q9BVV6 1533 aa9.65□□□□□ -0.86
CCAR1-213ENST00000541012 FMN1Q68DA7 1419 aa9.65□□□□□ -0.86
CCAR1-213ENST00000541012 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
CCAR1-213ENST00000541012 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
CCAR1-213ENST00000541012 FHOD3Q2V2M9 1422 aa9.62□□□□□ -0.87
CCAR1-213ENST00000541012 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
CCAR1-213ENST00000541012 UGGT2Q9NYU1 1516 aa9.6□□□□□ -0.87
CCAR1-213ENST00000541012 NUP160Q12769 1436 aa9.6□□□□□ -0.87
CCAR1-213ENST00000541012 FYCO1Q9BQS8 1478 aa9.59□□□□□ -0.87
CCAR1-213ENST00000541012 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
CCAR1-213ENST00000541012 MAP3K1Q13233 1512 aa9.59□□□□□ -0.87
CCAR1-213ENST00000541012 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
CCAR1-213ENST00000541012 CASKIN1Q8WXD9 1431 aa9.59□□□□□ -0.87
CCAR1-213ENST00000541012 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
CCAR1-213ENST00000541012 TTBK1Q5TCY1 1321 aaPredicted RBP9.57□□□□□ -0.88
CCAR1-213ENST00000541012 PCF11O94913 1555 aaKnown RBP9.56□□□□□ -0.88
CCAR1-213ENST00000541012 KIAA0556O60303 1618 aa9.55□□□□□ -0.88
CCAR1-213ENST00000541012 TIAM1Q13009 1591 aa9.55□□□□□ -0.88
CCAR1-213ENST00000541012 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
CCAR1-213ENST00000541012 CCDC18Q5T9S5 1454 aa9.54□□□□□ -0.88
CCAR1-213ENST00000541012 CHD1O14646 1710 aa9.53□□□□□ -0.88
CCAR1-213ENST00000541012 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
CCAR1-213ENST00000541012 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
CCAR1-213ENST00000541012 CFAP43Q8NDM7 1665 aa9.53□□□□□ -0.88
CCAR1-213ENST00000541012 DISP1Q96F81 1524 aa9.52□□□□□ -0.89
CCAR1-213ENST00000541012 LRRC9Q6ZRR7 1453 aa9.5□□□□□ -0.89
CCAR1-213ENST00000541012 MTUS2Q5JR59 1369 aa9.49□□□□□ -0.89
CCAR1-213ENST00000541012 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
CCAR1-213ENST00000541012 PRG4Q92954 1404 aaPredicted RBP9.48□□□□□ -0.89
CCAR1-213ENST00000541012 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
CCAR1-213ENST00000541012 PHF23Q9BUL5 403 aaPredicted RBP9.47□□□□□ -0.89
CCAR1-213ENST00000541012 RAPGEF6Q8TEU7 1601 aa9.47□□□□□ -0.89
CCAR1-213ENST00000541012 EHBP1L1Q8N3D4 1523 aa9.46□□□□□ -0.89
CCAR1-213ENST00000541012 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
CCAR1-213ENST00000541012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.45□□□□□ -0.9
CCAR1-213ENST00000541012 HNRNPUL2Q1KMD3 747 aaKnown RBP9.45□□□□□ -0.9
CCAR1-213ENST00000541012 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
CCAR1-213ENST00000541012 PTPRGP23470 1445 aa9.45□□□□□ -0.9
CCAR1-213ENST00000541012 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
CCAR1-213ENST00000541012 RRBP1Q9P2E9 1410 aaKnown RBP9.44□□□□□ -0.9
CCAR1-213ENST00000541012 CCNB3Q8WWL7 1395 aa9.43□□□□□ -0.9
CCAR1-213ENST00000541012 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
CCAR1-213ENST00000541012 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
CCAR1-213ENST00000541012 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
CCAR1-213ENST00000541012 ABCA8O94911 1581 aa9.4□□□□□ -0.9
CCAR1-213ENST00000541012 PLB1Q6P1J6 1458 aa9.4□□□□□ -0.9
CCAR1-213ENST00000541012 CDK13Q14004 1512 aaKnown RBP9.39□□□□□ -0.91
CCAR1-213ENST00000541012 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
CCAR1-213ENST00000541012 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
CCAR1-213ENST00000541012 PHLDB1Q86UU1 1377 aa9.39□□□□□ -0.91
CCAR1-213ENST00000541012 LRRIQ1Q96JM4 1722 aa9.39□□□□□ -0.91
CCAR1-213ENST00000541012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCAR1-213ENST00000541012 PLEKHD1A6NEE1 506 aa9.38□□□□□ -0.91
CCAR1-213ENST00000541012 ARID3CA6NKF2 412 aa9.38□□□□□ -0.91
CCAR1-213ENST00000541012 HRCP23327 699 aa9.37□□□□□ -0.91
CCAR1-213ENST00000541012 FAM50AQ14320 339 aaKnown RBP9.37□□□□□ -0.91
CCAR1-213ENST00000541012 MYOM3Q5VTT5 1437 aa9.37□□□□□ -0.91
CCAR1-213ENST00000541012 TROQ12816 1431 aaPredicted RBP9.37□□□□□ -0.91
CCAR1-213ENST00000541012 KDM4FA0A1W2PPD8 638 aa9.36□□□□□ -0.91
CCAR1-213ENST00000541012 FGD6Q6ZV73 1430 aa9.36□□□□□ -0.91
CCAR1-213ENST00000541012 ABCC2Q92887 1545 aa9.35□□□□□ -0.91
CCAR1-213ENST00000541012 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
CCAR1-213ENST00000541012 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
CCAR1-213ENST00000541012 MAGI3Q5TCQ9 1506 aa9.34□□□□□ -0.91
CCAR1-213ENST00000541012 UHRF1BP1LA0JNW5 1464 aa9.34□□□□□ -0.92
CCAR1-213ENST00000541012 ATP10BO94823 1461 aa9.34□□□□□ -0.92
CCAR1-213ENST00000541012 ITGAEP38570 1179 aa9.33□□□□□ -0.92
CCAR1-213ENST00000541012 KIF14Q15058 1648 aa9.32□□□□□ -0.92
CCAR1-213ENST00000541012 ERCC6L2Q5T890 1561 aa9.32□□□□□ -0.92
CCAR1-213ENST00000541012 ADCY10Q96PN6 1610 aa9.31□□□□□ -0.92
CCAR1-213ENST00000541012 ITSN2Q9NZM3 1697 aa9.31□□□□□ -0.92
CCAR1-213ENST00000541012 PTPN23Q9H3S7 1636 aa9.31□□□□□ -0.92
CCAR1-213ENST00000541012 TCOF1Q13428 1488 aaKnown RBP9.3□□□□□ -0.92
CCAR1-213ENST00000541012 NPM1P06748 294 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCAR1-213ENST00000541012 FAM69CQ0P6D2 419 aa9.28□□□□□ -0.92
CCAR1-213ENST00000541012 CFDP1Q9UEE9 299 aaPredicted RBP9.28□□□□□ -0.92
CCAR1-213ENST00000541012 KDM5BQ9UGL1 1544 aa9.28□□□□□ -0.92
CCAR1-213ENST00000541012 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
CCAR1-213ENST00000541012 SETD5Q9C0A6 1442 aa9.27□□□□□ -0.93
CCAR1-213ENST00000541012 ZCCHC11Q5TAX3 1644 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms