RNA–Protein interactions for RNA: ENST00000541012.5

CCAR1-213, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-213ENST00000541012 NISCHQ9Y2I1 1504 aa14.04□□□□□ -0.16
CCAR1-213ENST00000541012 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
CCAR1-213ENST00000541012 ABCC9O60706 1549 aa12.01□□□□□ -0.49
CCAR1-213ENST00000541012 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
CCAR1-213ENST00000541012 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
CCAR1-213ENST00000541012 DCAF1Q9Y4B6 1507 aa11.65□□□□□ -0.54
CCAR1-213ENST00000541012 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
CCAR1-213ENST00000541012 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
CCAR1-213ENST00000541012 NACADO15069 1562 aa11.47□□□□□ -0.57
CCAR1-213ENST00000541012 SHROOM4Q9ULL8 1493 aa11.42□□□□□ -0.58
CCAR1-213ENST00000541012 RB1CC1Q8TDY2 1594 aa11.38□□□□□ -0.59
CCAR1-213ENST00000541012 SCRIBQ14160 1630 aa11.26□□□□□ -0.61
CCAR1-213ENST00000541012 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCAR1-213ENST00000541012 AEBP2Q6ZN18 517 aaPredicted RBP11.16□□□□□ -0.62
CCAR1-213ENST00000541012 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
CCAR1-213ENST00000541012 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
CCAR1-213ENST00000541012 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
CCAR1-213ENST00000541012 BICRAQ9NZM4 1560 aa10.92□□□□□ -0.66
CCAR1-213ENST00000541012 CHIC1Q5VXU3 224 aa10.89□□□□□ -0.67
CCAR1-213ENST00000541012 BAZ1AQ9NRL2 1556 aaPredicted RBP10.89□□□□□ -0.67
CCAR1-213ENST00000541012 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
CCAR1-213ENST00000541012 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
CCAR1-213ENST00000541012 MROH2BQ7Z745 1585 aa10.81□□□□□ -0.68
CCAR1-213ENST00000541012 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
CCAR1-213ENST00000541012 CC2D2AQ9P2K1 1620 aa10.77□□□□□ -0.69
CCAR1-213ENST00000541012 WIZO95785 1651 aa10.72□□□□□ -0.69
CCAR1-213ENST00000541012 SMARCA2P51531 1590 aa10.68□□□□□ -0.7
CCAR1-213ENST00000541012 TOP2AP11388 1531 aaKnown RBP10.67□□□□□ -0.7
CCAR1-213ENST00000541012 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
CCAR1-213ENST00000541012 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.7
CCAR1-213ENST00000541012 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
CCAR1-213ENST00000541012 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
CCAR1-213ENST00000541012 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
CCAR1-213ENST00000541012 NCAPD3P42695 1498 aa10.55□□□□□ -0.72
CCAR1-213ENST00000541012 CCDC88BA6NC98 1476 aa10.53□□□□□ -0.72
CCAR1-213ENST00000541012 CUX2O14529 1486 aa10.46□□□□□ -0.73
CCAR1-213ENST00000541012 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
CCAR1-213ENST00000541012 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
CCAR1-213ENST00000541012 CFTRP13569 1480 aa10.31□□□□□ -0.76
CCAR1-213ENST00000541012 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
CCAR1-213ENST00000541012 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
CCAR1-213ENST00000541012 ABCC8Q09428 1581 aa10.27□□□□□ -0.76
CCAR1-213ENST00000541012 PRDM2Q13029 1718 aa10.25□□□□□ -0.77
CCAR1-213ENST00000541012 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
CCAR1-213ENST00000541012 NESP48681 1621 aa10.2□□□□□ -0.78
CCAR1-213ENST00000541012 EEA1Q15075 1411 aa10.19□□□□□ -0.78
CCAR1-213ENST00000541012 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
CCAR1-213ENST00000541012 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
CCAR1-213ENST00000541012 PDS5BQ9NTI5 1447 aa10.18□□□□□ -0.78
CCAR1-213ENST00000541012 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
CCAR1-213ENST00000541012 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
CCAR1-213ENST00000541012 FAM9AQ8IZU1 332 aaPredicted RBP10.16□□□□□ -0.78
CCAR1-213ENST00000541012 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
CCAR1-213ENST00000541012 CUX1P39880 1505 aa10.12□□□□□ -0.79
CCAR1-213ENST00000541012 DNMBPQ6XZF7 1577 aa10.09□□□□□ -0.79
CCAR1-213ENST00000541012 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
CCAR1-213ENST00000541012 SOGA1O94964 1423 aa10.09□□□□□ -0.79
CCAR1-213ENST00000541012 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
CCAR1-213ENST00000541012 LOC105371045A0A1W2PR82 267 aa10.07□□□□□ -0.8
CCAR1-213ENST00000541012 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
CCAR1-213ENST00000541012 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
CCAR1-213ENST00000541012 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
CCAR1-213ENST00000541012 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
CCAR1-213ENST00000541012 MRC2Q9UBG0 1479 aa10.02□□□□□ -0.81
CCAR1-213ENST00000541012 GOLGA3Q08378 1498 aa10.01□□□□□ -0.81
CCAR1-213ENST00000541012 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
CCAR1-213ENST00000541012 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
CCAR1-213ENST00000541012 RUSC2Q8N2Y8 1516 aa10□□□□□ -0.81
CCAR1-213ENST00000541012 EHMT2Q96KQ7 1210 aa9.99□□□□□ -0.81
CCAR1-213ENST00000541012 KIF21BO75037 1637 aa9.99□□□□□ -0.81
CCAR1-213ENST00000541012 POLA1P09884 1462 aaPredicted RBP9.99□□□□□ -0.81
CCAR1-213ENST00000541012 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
CCAR1-213ENST00000541012 ABCA10Q8WWZ4 1543 aa9.97□□□□□ -0.81
CCAR1-213ENST00000541012 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
CCAR1-213ENST00000541012 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
CCAR1-213ENST00000541012 RAD54L2Q9Y4B4 1467 aa9.93□□□□□ -0.82
CCAR1-213ENST00000541012 WDR62O43379 1518 aa9.93□□□□□ -0.82
CCAR1-213ENST00000541012 PRXQ9BXM0 1461 aa9.92□□□□□ -0.82
CCAR1-213ENST00000541012 IFT140Q96RY7 1462 aa9.91□□□□□ -0.82
CCAR1-213ENST00000541012 IGF1RP08069 1367 aa9.9□□□□□ -0.83
CCAR1-213ENST00000541012 WDR97A6NE52 1622 aa9.9□□□□□ -0.83
CCAR1-213ENST00000541012 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
CCAR1-213ENST00000541012 CARMIL1Q5VZK9 1371 aa9.89□□□□□ -0.83
CCAR1-213ENST00000541012 CEP162Q5TB80 1403 aa9.89□□□□□ -0.83
CCAR1-213ENST00000541012 CUL7Q14999 1698 aa9.88□□□□□ -0.83
CCAR1-213ENST00000541012 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
CCAR1-213ENST00000541012 TRHP20396 242 aaPredicted RBP9.87□□□□□ -0.83
CCAR1-213ENST00000541012 TARBP1Q13395 1621 aaKnown RBP9.86□□□□□ -0.83
CCAR1-213ENST00000541012 ABCA5Q8WWZ7 1642 aa9.86□□□□□ -0.83
CCAR1-213ENST00000541012 TDRD9Q8NDG6 1382 aaKnown RBP9.86□□□□□ -0.83
CCAR1-213ENST00000541012 RIMBP3CA6NJZ7 1639 aa9.84□□□□□ -0.83
CCAR1-213ENST00000541012 RIMBP3BA6NNM3 1639 aa9.84□□□□□ -0.83
CCAR1-213ENST00000541012 RIMBP3Q9UFD9 1639 aa9.84□□□□□ -0.83
CCAR1-213ENST00000541012 CLIP1P30622 1438 aa9.84□□□□□ -0.83
CCAR1-213ENST00000541012 CYB5RLQ6IPT4 315 aa9.83□□□□□ -0.84
CCAR1-213ENST00000541012 GRIN2BQ13224 1484 aa9.83□□□□□ -0.84
CCAR1-213ENST00000541012 PBRM1Q86U86 1689 aa9.8□□□□□ -0.84
CCAR1-213ENST00000541012 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
CCAR1-213ENST00000541012 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.847e-7■■■■■ 27.3
CCAR1-213ENST00000541012 ARHGEF11O15085 1522 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms