RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
NHLRC4-202ENST00000540585 CHD1O14646 1710 aa34.08■■■■□ 3.05
NHLRC4-202ENST00000540585 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
NHLRC4-202ENST00000540585 FBLN2P98095 1184 aa34.04■■■■□ 3.04
NHLRC4-202ENST00000540585 CLIP1P30622 1438 aa34.03■■■■□ 3.04
NHLRC4-202ENST00000540585 GRIN2AQ12879 1464 aa34.02■■■■□ 3.04
NHLRC4-202ENST00000540585 CEP170Q5SW79 1584 aa33.86■■■■□ 3.01
NHLRC4-202ENST00000540585 NUP160Q12769 1436 aa33.84■■■■□ 3.01
NHLRC4-202ENST00000540585 VPS8Q8N3P4 1428 aa33.81■■■■□ 3
NHLRC4-202ENST00000540585 CTTNBP2Q8WZ74 1663 aa33.76■■■□□ 2.99
NHLRC4-202ENST00000540585 OSCARQ8IYS5 282 aa33.72■■■□□ 2.99
NHLRC4-202ENST00000540585 RANGAP1P46060 587 aaPredicted RBP33.71■■■□□ 2.99
NHLRC4-202ENST00000540585 KIAA0586Q9BVV6 1533 aa33.69■■■□□ 2.98
NHLRC4-202ENST00000540585 CLASP1Q7Z460 1538 aa33.69■■■□□ 2.98
NHLRC4-202ENST00000540585 IQGAP2Q13576 1575 aa33.64■■■□□ 2.98
NHLRC4-202ENST00000540585 ARAP1Q96P48 1450 aa33.64■■■□□ 2.98
NHLRC4-202ENST00000540585 TTBK1Q5TCY1 1321 aaPredicted RBP33.63■■■□□ 2.97
NHLRC4-202ENST00000540585 ZEB1P37275 1124 aaPredicted RBP33.57■■■□□ 2.97
NHLRC4-202ENST00000540585 SHROOM2Q13796 1616 aa33.52■■■□□ 2.96
NHLRC4-202ENST00000540585 ARHGAP35Q9NRY4 1499 aa33.5■■■□□ 2.95
NHLRC4-202ENST00000540585 JPH4Q96JJ6 628 aa33.49■■■□□ 2.95
NHLRC4-202ENST00000540585 UGGT2Q9NYU1 1516 aa33.47■■■□□ 2.95
NHLRC4-202ENST00000540585 APLP2Q06481 763 aa33.46■■■□□ 2.95
NHLRC4-202ENST00000540585 SCAF1Q9H7N4 1312 aaKnown RBP33.39■■■□□ 2.94
NHLRC4-202ENST00000540585 PRG4Q92954 1404 aaPredicted RBP33.38■■■□□ 2.93
NHLRC4-202ENST00000540585 DISP1Q96F81 1524 aa33.36■■■□□ 2.93
NHLRC4-202ENST00000540585 SAMD9Q5K651 1589 aa33.36■■■□□ 2.93
NHLRC4-202ENST00000540585 ERCC6L2Q5T890 1561 aa33.34■■■□□ 2.93
NHLRC4-202ENST00000540585 KIAA0556O60303 1618 aa33.32■■■□□ 2.92
NHLRC4-202ENST00000540585 EFCAB5A4FU69 1503 aa33.32■■■□□ 2.92
NHLRC4-202ENST00000540585 CARMIL2Q6F5E8 1435 aa33.28■■■□□ 2.92
NHLRC4-202ENST00000540585 P3H3Q8IVL6 736 aa33.25■■■□□ 2.91
NHLRC4-202ENST00000540585 ARHGEF11O15085 1522 aa33.22■■■□□ 2.91
NHLRC4-202ENST00000540585 FHOD3Q2V2M9 1422 aa33.2■■■□□ 2.91
NHLRC4-202ENST00000540585 RIMBP3CA6NJZ7 1639 aa33.16■■■□□ 2.9
NHLRC4-202ENST00000540585 RIMBP3BA6NNM3 1639 aa33.16■■■□□ 2.9
NHLRC4-202ENST00000540585 RIMBP3Q9UFD9 1639 aa33.16■■■□□ 2.9
NHLRC4-202ENST00000540585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.12■■■□□ 2.89
NHLRC4-202ENST00000540585 KANK4Q5T7N3 995 aaPredicted RBP33.1■■■□□ 2.89
NHLRC4-202ENST00000540585 MYT1Q01538 1121 aa33.08■■■□□ 2.89
NHLRC4-202ENST00000540585 MAP3K1Q13233 1512 aa33.06■■■□□ 2.88
NHLRC4-202ENST00000540585 PTPRGP23470 1445 aa33.06■■■□□ 2.88
NHLRC4-202ENST00000540585 DNAJC5Q9H3Z4 198 aa33.06■■■□□ 2.88
NHLRC4-202ENST00000540585 CCER1Q8TC90 406 aaPredicted RBP33.05■■■□□ 2.88
NHLRC4-202ENST00000540585 TIAM1Q13009 1591 aa33.03■■■□□ 2.88
NHLRC4-202ENST00000540585 PCF11O94913 1555 aaKnown RBP33.02■■■□□ 2.88
NHLRC4-202ENST00000540585 FMN1Q68DA7 1419 aa32.98■■■□□ 2.87
NHLRC4-202ENST00000540585 CFAP43Q8NDM7 1665 aa32.94■■■□□ 2.86
NHLRC4-202ENST00000540585 HNRNPUL2Q1KMD3 747 aaKnown RBP32.94■■■□□ 2.86
NHLRC4-202ENST00000540585 PLB1Q6P1J6 1458 aa32.93■■■□□ 2.86
NHLRC4-202ENST00000540585 FYCO1Q9BQS8 1478 aa32.93■■■□□ 2.86
NHLRC4-202ENST00000540585 ABCA8O94911 1581 aa32.9■■■□□ 2.86
NHLRC4-202ENST00000540585 RRBP1Q9P2E9 1410 aaKnown RBP32.89■■■□□ 2.86
NHLRC4-202ENST00000540585 CASKIN1Q8WXD9 1431 aa32.88■■■□□ 2.85
NHLRC4-202ENST00000540585 RAPGEF6Q8TEU7 1601 aa32.88■■■□□ 2.85
NHLRC4-202ENST00000540585 LRRC9Q6ZRR7 1453 aa32.86■■■□□ 2.85
NHLRC4-202ENST00000540585 UACAQ9BZF9 1416 aa32.86■■■□□ 2.85
NHLRC4-202ENST00000540585 CYB5RLQ6IPT4 315 aa32.86■■■□□ 2.85
NHLRC4-202ENST00000540585 ABCC2Q92887 1545 aa32.81■■■□□ 2.84
NHLRC4-202ENST00000540585 ADCY10Q96PN6 1610 aa32.81■■■□□ 2.84
NHLRC4-202ENST00000540585 UHRF1BP1LA0JNW5 1464 aa32.79■■■□□ 2.84
NHLRC4-202ENST00000540585 NUP153P49790 1475 aaKnown RBP32.77■■■□□ 2.84
NHLRC4-202ENST00000540585 HECW1Q76N89 1606 aa32.77■■■□□ 2.84
NHLRC4-202ENST00000540585 CCNB3Q8WWL7 1395 aa32.75■■■□□ 2.83
NHLRC4-202ENST00000540585 ATP1B4Q9UN42 357 aaPredicted RBP32.74■■■□□ 2.83
NHLRC4-202ENST00000540585 LRRIQ1Q96JM4 1722 aa32.74■■■□□ 2.83
NHLRC4-202ENST00000540585 ACIN1Q9UKV3 1341 aaKnown RBP32.71■■■□□ 2.83
NHLRC4-202ENST00000540585 ARID3CA6NKF2 412 aa32.68■■■□□ 2.82
NHLRC4-202ENST00000540585 EPRSP07814 1512 aaKnown RBP32.66■■■□□ 2.82
NHLRC4-202ENST00000540585 CDK13Q14004 1512 aaKnown RBP32.64■■■□□ 2.82
NHLRC4-202ENST00000540585 KDM5BQ9UGL1 1544 aa32.64■■■□□ 2.82
NHLRC4-202ENST00000540585 ATP10BO94823 1461 aa32.64■■■□□ 2.82
NHLRC4-202ENST00000540585 PHLDB1Q86UU1 1377 aa32.63■■■□□ 2.81
NHLRC4-202ENST00000540585 ZCCHC11Q5TAX3 1644 aaKnown RBP32.62■■■□□ 2.81
NHLRC4-202ENST00000540585 CCDC18Q5T9S5 1454 aa32.6■■■□□ 2.81
NHLRC4-202ENST00000540585 NPM1P06748 294 aaKnown RBP eCLIP32.51■■■□□ 2.8
NHLRC4-202ENST00000540585 NEUROD1Q13562 356 aa32.48■■■□□ 2.79
NHLRC4-202ENST00000540585 MTUS2Q5JR59 1369 aa32.47■■■□□ 2.79
NHLRC4-202ENST00000540585 MAGI3Q5TCQ9 1506 aa32.45■■■□□ 2.78
NHLRC4-202ENST00000540585 EHBP1L1Q8N3D4 1523 aa32.43■■■□□ 2.78
NHLRC4-202ENST00000540585 ITGAEP38570 1179 aa32.41■■■□□ 2.78
NHLRC4-202ENST00000540585 MAPKBP1O60336 1514 aa32.4■■■□□ 2.78
NHLRC4-202ENST00000540585 ASXL2Q76L83 1435 aa32.4■■■□□ 2.78
NHLRC4-202ENST00000540585 CDK11AQ9UQ88 783 aaPredicted RBP32.39■■■□□ 2.78
NHLRC4-202ENST00000540585 PLEKHD1A6NEE1 506 aa32.37■■■□□ 2.77
NHLRC4-202ENST00000540585 SUPT6HQ7KZ85 1726 aaKnown RBP32.36■■■□□ 2.77
NHLRC4-202ENST00000540585 DHX57Q6P158 1386 aaKnown RBP32.36■■■□□ 2.77
NHLRC4-202ENST00000540585 FAM50AQ14320 339 aaKnown RBP32.36■■■□□ 2.77
NHLRC4-202ENST00000540585 WDR7Q9Y4E6 1490 aa32.35■■■□□ 2.77
NHLRC4-202ENST00000540585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.35■■■□□ 2.771e-6■■■■■ 39.4
NHLRC4-202ENST00000540585 TROQ12816 1431 aaPredicted RBP32.34■■■□□ 2.77
NHLRC4-202ENST00000540585 NCOA2Q15596 1464 aa32.34■■■□□ 2.77
NHLRC4-202ENST00000540585 FGD6Q6ZV73 1430 aa32.33■■■□□ 2.77
NHLRC4-202ENST00000540585 CLSPNQ9HAW4 1339 aa32.3■■■□□ 2.76
NHLRC4-202ENST00000540585 CENPBP07199 599 aaPredicted RBP32.3■■■□□ 2.76
NHLRC4-202ENST00000540585 GTF3C3Q9Y5Q9 886 aa32.27■■■□□ 2.76
NHLRC4-202ENST00000540585 KIF14Q15058 1648 aa32.26■■■□□ 2.76
NHLRC4-202ENST00000540585 MYOM3Q5VTT5 1437 aa32.25■■■□□ 2.75
NHLRC4-202ENST00000540585 KCNH8Q96L42 1107 aa32.24■■■□□ 2.75
NHLRC4-202ENST00000540585 RAB3GAP2Q9H2M9 1393 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms