RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
LTBR-207ENST00000539925 PPARGC1BQ86YN6 1023 aaKnown RBP26.42■■□□□ 1.82
LTBR-207ENST00000539925 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
LTBR-207ENST00000539925 HRCP23327 699 aa26.38■■□□□ 1.81
LTBR-207ENST00000539925 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
LTBR-207ENST00000539925 MAP3K1Q13233 1512 aa26.34■■□□□ 1.81
LTBR-207ENST00000539925 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.8
LTBR-207ENST00000539925 FMN1Q68DA7 1419 aa26.27■■□□□ 1.8
LTBR-207ENST00000539925 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
LTBR-207ENST00000539925 SAMD9Q5K651 1589 aa26.24■■□□□ 1.79
LTBR-207ENST00000539925 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
LTBR-207ENST00000539925 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
LTBR-207ENST00000539925 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
LTBR-207ENST00000539925 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
LTBR-207ENST00000539925 FHOD3Q2V2M9 1422 aa26.19■■□□□ 1.78
LTBR-207ENST00000539925 CASKIN1Q8WXD9 1431 aa26.19■■□□□ 1.78
LTBR-207ENST00000539925 KIAA0586Q9BVV6 1533 aa26.18■■□□□ 1.78
LTBR-207ENST00000539925 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
LTBR-207ENST00000539925 ZEB1P37275 1124 aaPredicted RBP26.15■■□□□ 1.78
LTBR-207ENST00000539925 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
LTBR-207ENST00000539925 UGGT2Q9NYU1 1516 aa26.13■■□□□ 1.77
LTBR-207ENST00000539925 PCF11O94913 1555 aaKnown RBP26.11■■□□□ 1.77
LTBR-207ENST00000539925 P3H3Q8IVL6 736 aa26.11■■□□□ 1.77
LTBR-207ENST00000539925 CHMP7Q8WUX9 453 aaPredicted RBP26.1■■□□□ 1.77
LTBR-207ENST00000539925 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
LTBR-207ENST00000539925 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
LTBR-207ENST00000539925 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
LTBR-207ENST00000539925 NUP160Q12769 1436 aa26.02■■□□□ 1.76
LTBR-207ENST00000539925 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
LTBR-207ENST00000539925 CCDC18Q5T9S5 1454 aa25.94■■□□□ 1.74
LTBR-207ENST00000539925 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
LTBR-207ENST00000539925 ATP1B4Q9UN42 357 aaPredicted RBP25.93■■□□□ 1.74
LTBR-207ENST00000539925 KIAA0556O60303 1618 aa25.91■■□□□ 1.74
LTBR-207ENST00000539925 FBLN2P98095 1184 aa25.9■■□□□ 1.74
LTBR-207ENST00000539925 CCNB3Q8WWL7 1395 aa25.9■■□□□ 1.74
LTBR-207ENST00000539925 HECW1Q76N89 1606 aa25.9■■□□□ 1.74
LTBR-207ENST00000539925 DISP1Q96F81 1524 aa25.9■■□□□ 1.74
LTBR-207ENST00000539925 CARMIL2Q6F5E8 1435 aa25.89■■□□□ 1.73
LTBR-207ENST00000539925 MTUS2Q5JR59 1369 aa25.83■■□□□ 1.73
LTBR-207ENST00000539925 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
LTBR-207ENST00000539925 JPH4Q96JJ6 628 aa25.81■■□□□ 1.72
LTBR-207ENST00000539925 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
LTBR-207ENST00000539925 EHBP1L1Q8N3D4 1523 aa25.8■■□□□ 1.72
LTBR-207ENST00000539925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.78■■□□□ 1.72
LTBR-207ENST00000539925 PHLDB1Q86UU1 1377 aa25.76■■□□□ 1.71
LTBR-207ENST00000539925 EPRSP07814 1512 aaKnown RBP25.76■■□□□ 1.71
LTBR-207ENST00000539925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
LTBR-207ENST00000539925 LRRIQ1Q96JM4 1722 aa25.71■■□□□ 1.71
LTBR-207ENST00000539925 SUPT6HQ7KZ85 1726 aaKnown RBP25.7■■□□□ 1.7
LTBR-207ENST00000539925 RAPGEF6Q8TEU7 1601 aa25.7■■□□□ 1.7
LTBR-207ENST00000539925 CHD1O14646 1710 aa25.68■■□□□ 1.7
LTBR-207ENST00000539925 CDK11AQ9UQ88 783 aaPredicted RBP25.67■■□□□ 1.7
LTBR-207ENST00000539925 NCOA2Q15596 1464 aa25.65■■□□□ 1.7
LTBR-207ENST00000539925 FGD6Q6ZV73 1430 aa25.64■■□□□ 1.69
LTBR-207ENST00000539925 NUP153P49790 1475 aaKnown RBP25.63■■□□□ 1.69
LTBR-207ENST00000539925 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
LTBR-207ENST00000539925 MYOM3Q5VTT5 1437 aa25.62■■□□□ 1.69
LTBR-207ENST00000539925 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
LTBR-207ENST00000539925 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
LTBR-207ENST00000539925 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.69
LTBR-207ENST00000539925 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
LTBR-207ENST00000539925 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
LTBR-207ENST00000539925 MAGI3Q5TCQ9 1506 aa25.56■■□□□ 1.68
LTBR-207ENST00000539925 ABCA8O94911 1581 aa25.54■■□□□ 1.68
LTBR-207ENST00000539925 MIA2Q96PC5 1412 aa25.53■■□□□ 1.68
LTBR-207ENST00000539925 PLB1Q6P1J6 1458 aa25.52■■□□□ 1.68
LTBR-207ENST00000539925 PTPRGP23470 1445 aa25.52■■□□□ 1.68
LTBR-207ENST00000539925 TROQ12816 1431 aaPredicted RBP25.49■■□□□ 1.67
LTBR-207ENST00000539925 CLASP1Q7Z460 1538 aa25.48■■□□□ 1.67
LTBR-207ENST00000539925 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
LTBR-207ENST00000539925 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
LTBR-207ENST00000539925 ITGAEP38570 1179 aa25.45■■□□□ 1.67
LTBR-207ENST00000539925 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
LTBR-207ENST00000539925 DHX57Q6P158 1386 aaKnown RBP25.4■■□□□ 1.66
LTBR-207ENST00000539925 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.65
LTBR-207ENST00000539925 PLEKHD1A6NEE1 506 aa25.39■■□□□ 1.65
LTBR-207ENST00000539925 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
LTBR-207ENST00000539925 RAB3GAP2Q9H2M9 1393 aa25.38■■□□□ 1.65
LTBR-207ENST00000539925 ARID3CA6NKF2 412 aa25.37■■□□□ 1.65
LTBR-207ENST00000539925 ATP10BO94823 1461 aa25.37■■□□□ 1.65
LTBR-207ENST00000539925 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
LTBR-207ENST00000539925 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
LTBR-207ENST00000539925 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
LTBR-207ENST00000539925 AKNAQ7Z591 1439 aa25.31■■□□□ 1.64
LTBR-207ENST00000539925 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
LTBR-207ENST00000539925 KIF14Q15058 1648 aa25.28■■□□□ 1.64
LTBR-207ENST00000539925 UHRF1BP1LA0JNW5 1464 aa25.27■■□□□ 1.64
LTBR-207ENST00000539925 GPATCH8Q9UKJ3 1502 aaKnown RBP25.23■■□□□ 1.63
LTBR-207ENST00000539925 PTPRKQ15262 1439 aa25.23■■□□□ 1.63
LTBR-207ENST00000539925 CFDP1Q9UEE9 299 aaPredicted RBP25.21■■□□□ 1.63
LTBR-207ENST00000539925 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
LTBR-207ENST00000539925 ROCK1Q13464 1354 aa25.2■■□□□ 1.62
LTBR-207ENST00000539925 ABCC10Q5T3U5 1492 aa25.19■■□□□ 1.62
LTBR-207ENST00000539925 NAIPQ13075 1403 aa25.19■■□□□ 1.62
LTBR-207ENST00000539925 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
LTBR-207ENST00000539925 DNMT1P26358 1616 aaKnown RBP25.17■■□□□ 1.62
LTBR-207ENST00000539925 DAPK1P53355 1430 aa25.16■■□□□ 1.62
LTBR-207ENST00000539925 CAMSAP2Q08AD1 1489 aa25.13■■□□□ 1.61
LTBR-207ENST00000539925 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
LTBR-207ENST00000539925 GCC2Q8IWJ2 1684 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms