RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 QKIQ96PU8 341 aaKnown RBP eCLIP17.77■□□□□ 0.445e-17■■■■■ 95.5
LTBR-207ENST00000539925 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■■■ 95.3
LTBR-207ENST00000539925 ZRANB2O95218 330 aaKnown RBP eCLIP18.28■□□□□ 0.525e-8■■■■■ 51.3
LTBR-207ENST00000539925 EFTUD2Q15029 972 aaKnown RBP eCLIP17.5■□□□□ 0.393e-9■■■■■ 48.7
LTBR-207ENST00000539925 RBM5P52756 815 aaKnown RBP eCLIP19.76■□□□□ 0.753e-10■■■■■ 45.8
LTBR-207ENST00000539925 UPF1Q92900 1129 aaKnown RBP eCLIP19.52■□□□□ 0.721e-10■■■■■ 41
LTBR-207ENST00000539925 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.31■□□□□ 0.523e-8■■■■■ 29.7
LTBR-207ENST00000539925 SF3B4Q15427 424 aaKnown RBP eCLIP15.03■□□□□ -01e-8■■■■■ 29.1
LTBR-207ENST00000539925 U2AF2P26368 475 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■■■■■ 28.8
LTBR-207ENST00000539925 DDX3XO00571 662 aaKnown RBP eCLIP18.51■□□□□ 0.552e-29■■■■■ 28.3
LTBR-207ENST00000539925 HNRNPKP61978 463 aaKnown RBP eCLIP16.29■□□□□ 0.29e-7■■■■■ 27.6
LTBR-207ENST00000539925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.591e-6■■■■■ 27.4
LTBR-207ENST00000539925 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.839e-7■■■■□ 24.8
LTBR-207ENST00000539925 HNRNPLP14866 589 aaKnown RBP eCLIP16.95■□□□□ 0.39e-7■■■■□ 20.6
LTBR-207ENST00000539925 RBFOX2O43251 390 aaKnown RBP eCLIP14.22□□□□□ -0.133e-10■■■■□ 19.3
LTBR-207ENST00000539925 AKAP1Q92667 903 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■■□□ 18.3
LTBR-207ENST00000539925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.256e-7■■■□□ 17.1
LTBR-207ENST00000539925 XRN2Q9H0D6 950 aaKnown RBP eCLIP18■□□□□ 0.473e-6■■■□□ 16.6
LTBR-207ENST00000539925 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.58■□□□□ 0.891e-6■■■□□ 15.4
LTBR-207ENST00000539925 YBX3P16989 372 aaKnown RBP eCLIP19.12■□□□□ 0.656e-11■■□□□ 12.3
LTBR-207ENST00000539925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.485e-8■□□□□ 11.3
LTBR-207ENST00000539925 PPIGQ13427 754 aaKnown RBP eCLIP17.55■□□□□ 0.46e-13■□□□□ 10.7
LTBR-207ENST00000539925 SND1Q7KZF4 910 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■□□□□ 10
LTBR-207ENST00000539925 RBM22Q9NW64 420 aaKnown RBP eCLIP17.51■□□□□ 0.391e-9■□□□□ 9.3
LTBR-207ENST00000539925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.78■□□□□ 0.442e-10■□□□□ 8.8
LTBR-207ENST00000539925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.29■□□□□ 0.365e-6■□□□□ 8.2
Retrieved 26 of 26 RNA–protein pairs in 34.2 ms