RNA–Protein interactions for RNA: ENST00000537739.5

HDGF-210, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-210ENST00000537739 ERCC6Q03468 1493 aa39.5■■■■□ 3.91
HDGF-210ENST00000537739 PBRM1Q86U86 1689 aa39.47■■■■□ 3.91
HDGF-210ENST00000537739 IFT140Q96RY7 1462 aa39.45■■■■□ 3.91
HDGF-210ENST00000537739 ZNF608Q9ULD9 1512 aaPredicted RBP39.44■■■■□ 3.9
HDGF-210ENST00000537739 FHOD3Q2V2M9 1422 aa39.41■■■■□ 3.9
HDGF-210ENST00000537739 CCER1Q8TC90 406 aaPredicted RBP39.4■■■■□ 3.9
HDGF-210ENST00000537739 HNRNPUL2Q1KMD3 747 aaKnown RBP39.38■■■■□ 3.89
HDGF-210ENST00000537739 EFCAB5A4FU69 1503 aa39.38■■■■□ 3.89
HDGF-210ENST00000537739 THOC2Q8NI27 1593 aaKnown RBP39.35■■■■□ 3.89
HDGF-210ENST00000537739 FHAD1B1AJZ9 1412 aa39.34■■■■□ 3.89
HDGF-210ENST00000537739 GRIN2BQ13224 1484 aa39.34■■■■□ 3.89
HDGF-210ENST00000537739 ADAMTS12P58397 1594 aa39.3■■■■□ 3.88
HDGF-210ENST00000537739 TIAM1Q13009 1591 aa39.28■■■■□ 3.88
HDGF-210ENST00000537739 PCF11O94913 1555 aaKnown RBP39.28■■■■□ 3.88
HDGF-210ENST00000537739 MAP3K1Q13233 1512 aa39.26■■■■□ 3.88
HDGF-210ENST00000537739 SAMD9Q5K651 1589 aa39.2■■■■□ 3.87
HDGF-210ENST00000537739 ATP1B4Q9UN42 357 aaPredicted RBP39.17■■■■□ 3.86
HDGF-210ENST00000537739 EIF4G3O43432 1585 aaKnown RBP39.15■■■■□ 3.86
HDGF-210ENST00000537739 CASKIN1Q8WXD9 1431 aa39.14■■■■□ 3.86
HDGF-210ENST00000537739 LRRC9Q6ZRR7 1453 aa39.14■■■■□ 3.86
HDGF-210ENST00000537739 RRBP1Q9P2E9 1410 aaKnown RBP39.14■■■■□ 3.86
HDGF-210ENST00000537739 FYCO1Q9BQS8 1478 aa39.12■■■■□ 3.85
HDGF-210ENST00000537739 FMN1Q68DA7 1419 aa39.09■■■■□ 3.85
HDGF-210ENST00000537739 SNAPC4Q5SXM2 1469 aa39.09■■■■□ 3.85
HDGF-210ENST00000537739 CFAP43Q8NDM7 1665 aa39.08■■■■□ 3.85
HDGF-210ENST00000537739 IQGAP2Q13576 1575 aa39.02■■■■□ 3.84
HDGF-210ENST00000537739 CCNB3Q8WWL7 1395 aa39■■■■□ 3.83
HDGF-210ENST00000537739 PHLDB1Q86UU1 1377 aa38.93■■■■□ 3.82
HDGF-210ENST00000537739 GRIN2AQ12879 1464 aa38.91■■■■□ 3.82
HDGF-210ENST00000537739 MAGI1Q96QZ7 1491 aaPredicted RBP38.87■■■■□ 3.81
HDGF-210ENST00000537739 LRRIQ1Q96JM4 1722 aa38.86■■■■□ 3.81
HDGF-210ENST00000537739 KIAA0586Q9BVV6 1533 aa38.84■■■■□ 3.81
HDGF-210ENST00000537739 UGGT2Q9NYU1 1516 aa38.83■■■■□ 3.81
HDGF-210ENST00000537739 CHMP7Q8WUX9 453 aaPredicted RBP38.78■■■■□ 3.8
HDGF-210ENST00000537739 SYNJ2O15056 1496 aa38.78■■■■□ 3.8
HDGF-210ENST00000537739 ITGAEP38570 1179 aa38.77■■■■□ 3.8
HDGF-210ENST00000537739 FBLN2P98095 1184 aa38.72■■■■□ 3.79
HDGF-210ENST00000537739 DISP1Q96F81 1524 aa38.7■■■■□ 3.79
HDGF-210ENST00000537739 CEP170Q5SW79 1584 aa38.69■■■■□ 3.78
HDGF-210ENST00000537739 MTUS2Q5JR59 1369 aa38.68■■■■□ 3.78
HDGF-210ENST00000537739 FAM50AQ14320 339 aaKnown RBP38.64■■■■□ 3.78
HDGF-210ENST00000537739 KIAA0556O60303 1618 aa38.63■■■■□ 3.77
HDGF-210ENST00000537739 HECW1Q76N89 1606 aa38.57■■■■□ 3.77
HDGF-210ENST00000537739 DHX57Q6P158 1386 aaKnown RBP38.57■■■■□ 3.77
HDGF-210ENST00000537739 MAGI3Q5TCQ9 1506 aa38.57■■■■□ 3.77
HDGF-210ENST00000537739 NUP160Q12769 1436 aa38.56■■■■□ 3.76
HDGF-210ENST00000537739 CCDC18Q5T9S5 1454 aa38.55■■■■□ 3.76
HDGF-210ENST00000537739 EPRSP07814 1512 aaKnown RBP38.54■■■■□ 3.76
HDGF-210ENST00000537739 NCOA2Q15596 1464 aa38.52■■■■□ 3.76
HDGF-210ENST00000537739 FGD6Q6ZV73 1430 aa38.5■■■■□ 3.75
HDGF-210ENST00000537739 EHBP1L1Q8N3D4 1523 aa38.5■■■■□ 3.75
HDGF-210ENST00000537739 ARID3CA6NKF2 412 aa38.5■■■■□ 3.75
HDGF-210ENST00000537739 CDK13Q14004 1512 aaKnown RBP38.49■■■■□ 3.75
HDGF-210ENST00000537739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.45■■■■□ 3.751e-6■■□□□ 11.9
HDGF-210ENST00000537739 JPH4Q96JJ6 628 aa38.45■■■■□ 3.75
HDGF-210ENST00000537739 SUPT6HQ7KZ85 1726 aaKnown RBP38.45■■■■□ 3.74
HDGF-210ENST00000537739 RAB3GAP2Q9H2M9 1393 aa38.44■■■■□ 3.74
HDGF-210ENST00000537739 ARHGEF11O15085 1522 aa38.4■■■■□ 3.74
HDGF-210ENST00000537739 MYOM3Q5VTT5 1437 aa38.39■■■■□ 3.74
HDGF-210ENST00000537739 SETD5Q9C0A6 1442 aa38.38■■■■□ 3.73
HDGF-210ENST00000537739 NUP153P49790 1475 aaKnown RBP38.36■■■■□ 3.73
HDGF-210ENST00000537739 CLSPNQ9HAW4 1339 aa38.35■■■■□ 3.73
HDGF-210ENST00000537739 RAPGEF6Q8TEU7 1601 aa38.34■■■■□ 3.73
HDGF-210ENST00000537739 CARMIL2Q6F5E8 1435 aa38.29■■■■□ 3.72
HDGF-210ENST00000537739 PLB1Q6P1J6 1458 aa38.26■■■■□ 3.72
HDGF-210ENST00000537739 PTPRKQ15262 1439 aa38.25■■■■□ 3.71
HDGF-210ENST00000537739 PTPN23Q9H3S7 1636 aa38.2■■■■□ 3.71
HDGF-210ENST00000537739 CHD1O14646 1710 aa38.2■■■■□ 3.7
HDGF-210ENST00000537739 TCOF1Q13428 1488 aaKnown RBP38.11■■■■□ 3.69
HDGF-210ENST00000537739 MAPKBP1O60336 1514 aa38.1■■■■□ 3.69
HDGF-210ENST00000537739 PRG4Q92954 1404 aaPredicted RBP38.09■■■■□ 3.69
HDGF-210ENST00000537739 ZNF316A6NFI3 1004 aaPredicted RBP38.06■■■■□ 3.68
HDGF-210ENST00000537739 CDK11AQ9UQ88 783 aaPredicted RBP38.06■■■■□ 3.68
HDGF-210ENST00000537739 MIA2Q96PC5 1412 aa38.04■■■■□ 3.68
HDGF-210ENST00000537739 ABCA8O94911 1581 aa38.03■■■■□ 3.68
HDGF-210ENST00000537739 HFM1A2PYH4 1435 aa38.02■■■■□ 3.68
HDGF-210ENST00000537739 TROQ12816 1431 aaPredicted RBP37.99■■■■□ 3.67
HDGF-210ENST00000537739 NAIPQ13075 1403 aa37.97■■■■□ 3.67
HDGF-210ENST00000537739 DIEXFQ68CQ4 756 aaKnown RBP37.93■■■■□ 3.66
HDGF-210ENST00000537739 CHIC2Q9UKJ5 165 aa37.92■■■■□ 3.66
HDGF-210ENST00000537739 PTPRGP23470 1445 aa37.92■■■■□ 3.66
HDGF-210ENST00000537739 ATP10BO94823 1461 aa37.91■■■■□ 3.66
HDGF-210ENST00000537739 SHROOM2Q13796 1616 aa37.89■■■■□ 3.66
HDGF-210ENST00000537739 ZNF644Q9H582 1327 aaPredicted RBP37.89■■■■□ 3.66
HDGF-210ENST00000537739 RRP7BPQ9NSQ0 103 aa37.87■■■■□ 3.65
HDGF-210ENST00000537739 KIF14Q15058 1648 aa37.87■■■■□ 3.65
HDGF-210ENST00000537739 SIN3AQ96ST3 1273 aa37.84■■■■□ 3.65
HDGF-210ENST00000537739 ADCY10Q96PN6 1610 aa37.81■■■■□ 3.64
HDGF-210ENST00000537739 ERCC6L2Q5T890 1561 aa37.81■■■■□ 3.64
HDGF-210ENST00000537739 PLEKHD1A6NEE1 506 aa37.79■■■■□ 3.64
HDGF-210ENST00000537739 GPATCH8Q9UKJ3 1502 aaKnown RBP37.78■■■■□ 3.64
HDGF-210ENST00000537739 UACAQ9BZF9 1416 aa37.76■■■■□ 3.64
HDGF-210ENST00000537739 DAPK1P53355 1430 aa37.75■■■■□ 3.63
HDGF-210ENST00000537739 ABCC5O15440 1437 aa37.74■■■■□ 3.63
HDGF-210ENST00000537739 NEUROD1Q13562 356 aa37.74■■■■□ 3.63
HDGF-210ENST00000537739 CFDP1Q9UEE9 299 aaPredicted RBP37.73■■■■□ 3.63
HDGF-210ENST00000537739 AKNAQ7Z591 1439 aa37.71■■■■□ 3.63
HDGF-210ENST00000537739 GCC2Q8IWJ2 1684 aa37.71■■■■□ 3.63
HDGF-210ENST00000537739 CLASP1Q7Z460 1538 aa37.7■■■■□ 3.63
HDGF-210ENST00000537739 DNMT1P26358 1616 aaKnown RBP37.7■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms