RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
CDCA3-204ENST00000535406 IGF1RP08069 1367 aa16.21■□□□□ 0.19
CDCA3-204ENST00000535406 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
CDCA3-204ENST00000535406 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
CDCA3-204ENST00000535406 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
CDCA3-204ENST00000535406 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
CDCA3-204ENST00000535406 KIAA0586Q9BVV6 1533 aa16.1■□□□□ 0.17
CDCA3-204ENST00000535406 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
CDCA3-204ENST00000535406 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
CDCA3-204ENST00000535406 IQGAP2Q13576 1575 aa16.02■□□□□ 0.16
CDCA3-204ENST00000535406 TRHP20396 242 aaPredicted RBP16.02■□□□□ 0.16
CDCA3-204ENST00000535406 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
CDCA3-204ENST00000535406 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
CDCA3-204ENST00000535406 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
CDCA3-204ENST00000535406 ADCY10Q96PN6 1610 aa15.92■□□□□ 0.14
CDCA3-204ENST00000535406 UGGT2Q9NYU1 1516 aa15.91■□□□□ 0.14
CDCA3-204ENST00000535406 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
CDCA3-204ENST00000535406 DISP1Q96F81 1524 aa15.89■□□□□ 0.13
CDCA3-204ENST00000535406 PTPRGP23470 1445 aa15.89■□□□□ 0.13
CDCA3-204ENST00000535406 EEA1Q15075 1411 aa15.89■□□□□ 0.13
CDCA3-204ENST00000535406 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
CDCA3-204ENST00000535406 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
CDCA3-204ENST00000535406 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDCA3-204ENST00000535406 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-204ENST00000535406 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
CDCA3-204ENST00000535406 KIF13AQ9H1H9 1805 aa15.82■□□□□ 0.12
CDCA3-204ENST00000535406 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
CDCA3-204ENST00000535406 ADRA2BP18089 450 aa15.81■□□□□ 0.12
CDCA3-204ENST00000535406 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
CDCA3-204ENST00000535406 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
CDCA3-204ENST00000535406 UACAQ9BZF9 1416 aa15.78■□□□□ 0.12
CDCA3-204ENST00000535406 FOXD1Q16676 465 aa15.78■□□□□ 0.12
CDCA3-204ENST00000535406 DIP2BQ9P265 1576 aa15.77■□□□□ 0.12
CDCA3-204ENST00000535406 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.12
CDCA3-204ENST00000535406 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-204ENST00000535406 KIF21BO75037 1637 aa15.76■□□□□ 0.11
CDCA3-204ENST00000535406 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
CDCA3-204ENST00000535406 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
CDCA3-204ENST00000535406 KDM5BQ9UGL1 1544 aa15.71■□□□□ 0.11
CDCA3-204ENST00000535406 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
CDCA3-204ENST00000535406 ZCCHC11Q5TAX3 1644 aaKnown RBP15.7■□□□□ 0.1
CDCA3-204ENST00000535406 PLB1Q6P1J6 1458 aa15.7■□□□□ 0.1
CDCA3-204ENST00000535406 ASXL2Q76L83 1435 aa15.7■□□□□ 0.1
CDCA3-204ENST00000535406 ABCA8O94911 1581 aa15.69■□□□□ 0.1
CDCA3-204ENST00000535406 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
CDCA3-204ENST00000535406 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
CDCA3-204ENST00000535406 GLI2P10070 1586 aa15.63■□□□□ 0.09
CDCA3-204ENST00000535406 EFCAB5A4FU69 1503 aa15.62■□□□□ 0.09
CDCA3-204ENST00000535406 EPRSP07814 1512 aaKnown RBP15.62■□□□□ 0.09
CDCA3-204ENST00000535406 WDR7Q9Y4E6 1490 aa15.61■□□□□ 0.09
CDCA3-204ENST00000535406 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
CDCA3-204ENST00000535406 FHOD3Q2V2M9 1422 aa15.59■□□□□ 0.09
CDCA3-204ENST00000535406 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
CDCA3-204ENST00000535406 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
CDCA3-204ENST00000535406 MAP3K4Q9Y6R4 1608 aa15.58■□□□□ 0.08
CDCA3-204ENST00000535406 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
CDCA3-204ENST00000535406 KDM6BO15054 1643 aa15.57■□□□□ 0.08
CDCA3-204ENST00000535406 PPRC1Q5VV67 1664 aaKnown RBP15.57■□□□□ 0.08
CDCA3-204ENST00000535406 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
CDCA3-204ENST00000535406 ATP10BO94823 1461 aa15.53■□□□□ 0.08
CDCA3-204ENST00000535406 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
CDCA3-204ENST00000535406 NUP153P49790 1475 aaKnown RBP15.51■□□□□ 0.07
CDCA3-204ENST00000535406 TEX14Q8IWB6 1497 aa15.51■□□□□ 0.07
CDCA3-204ENST00000535406 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
CDCA3-204ENST00000535406 KCNH8Q96L42 1107 aa15.47■□□□□ 0.07
CDCA3-204ENST00000535406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
CDCA3-204ENST00000535406 KCNA4P22459 653 aa15.46■□□□□ 0.07
CDCA3-204ENST00000535406 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
CDCA3-204ENST00000535406 CD109Q6YHK3 1445 aa15.46■□□□□ 0.07
CDCA3-204ENST00000535406 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
CDCA3-204ENST00000535406 MAGI3Q5TCQ9 1506 aa15.45■□□□□ 0.06
CDCA3-204ENST00000535406 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
CDCA3-204ENST00000535406 ABCA9Q8IUA7 1624 aa15.43■□□□□ 0.06
CDCA3-204ENST00000535406 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
CDCA3-204ENST00000535406 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
CDCA3-204ENST00000535406 PLEKHD1A6NEE1 506 aa15.37■□□□□ 0.05
CDCA3-204ENST00000535406 ATP1B4Q9UN42 357 aaPredicted RBP15.35■□□□□ 0.05
CDCA3-204ENST00000535406 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
CDCA3-204ENST00000535406 CLIP1P30622 1438 aa15.33■□□□□ 0.05
CDCA3-204ENST00000535406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDCA3-204ENST00000535406 TTC37Q6PGP7 1564 aa15.32■□□□□ 0.04
CDCA3-204ENST00000535406 NEO1Q92859 1461 aa15.31■□□□□ 0.04
CDCA3-204ENST00000535406 LRRIQ1Q96JM4 1722 aa15.31■□□□□ 0.04
CDCA3-204ENST00000535406 ARAP3Q8WWN8 1544 aa15.31■□□□□ 0.04
CDCA3-204ENST00000535406 PHLDB1Q86UU1 1377 aa15.3■□□□□ 0.04
CDCA3-204ENST00000535406 CASKIN1Q8WXD9 1431 aa15.3■□□□□ 0.04
CDCA3-204ENST00000535406 CFAP74Q9C0B2 1584 aa15.29■□□□□ 0.04
CDCA3-204ENST00000535406 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
CDCA3-204ENST00000535406 KIF14Q15058 1648 aa15.28■□□□□ 0.04
CDCA3-204ENST00000535406 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
CDCA3-204ENST00000535406 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
CDCA3-204ENST00000535406 FANCAO15360 1455 aa15.26■□□□□ 0.03
CDCA3-204ENST00000535406 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
CDCA3-204ENST00000535406 MYO5CQ9NQX4 1742 aa15.24■□□□□ 0.03
CDCA3-204ENST00000535406 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
CDCA3-204ENST00000535406 FRMPD1Q5SYB0 1578 aa15.23■□□□□ 0.03
CDCA3-204ENST00000535406 AKNAQ7Z591 1439 aa15.22■□□□□ 0.03
CDCA3-204ENST00000535406 ADGRL1O94910 1474 aa15.22■□□□□ 0.03
CDCA3-204ENST00000535406 KDM4FA0A1W2PPD8 638 aa15.21■□□□□ 0.03
CDCA3-204ENST00000535406 PLCH2O75038 1416 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms