RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
ACER3-210ENST00000531352 EEA1Q15075 1411 aa19.48■□□□□ 0.71
ACER3-210ENST00000531352 ERCC6L2Q5T890 1561 aa19.48■□□□□ 0.71
ACER3-210ENST00000531352 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
ACER3-210ENST00000531352 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
ACER3-210ENST00000531352 KIAA0586Q9BVV6 1533 aa19.47■□□□□ 0.71
ACER3-210ENST00000531352 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
ACER3-210ENST00000531352 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
ACER3-210ENST00000531352 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
ACER3-210ENST00000531352 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
ACER3-210ENST00000531352 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
ACER3-210ENST00000531352 CTTNBP2Q8WZ74 1663 aa19.34■□□□□ 0.69
ACER3-210ENST00000531352 KIF21BO75037 1637 aa19.31■□□□□ 0.68
ACER3-210ENST00000531352 DISP1Q96F81 1524 aa19.27■□□□□ 0.68
ACER3-210ENST00000531352 UGGT2Q9NYU1 1516 aa19.27■□□□□ 0.68
ACER3-210ENST00000531352 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
ACER3-210ENST00000531352 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
ACER3-210ENST00000531352 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
ACER3-210ENST00000531352 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
ACER3-210ENST00000531352 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
ACER3-210ENST00000531352 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
ACER3-210ENST00000531352 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
ACER3-210ENST00000531352 PTPRGP23470 1445 aa19.17■□□□□ 0.66
ACER3-210ENST00000531352 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
ACER3-210ENST00000531352 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
ACER3-210ENST00000531352 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
ACER3-210ENST00000531352 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
ACER3-210ENST00000531352 UACAQ9BZF9 1416 aa19.04■□□□□ 0.64
ACER3-210ENST00000531352 PLB1Q6P1J6 1458 aa19.04■□□□□ 0.64
ACER3-210ENST00000531352 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
ACER3-210ENST00000531352 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
ACER3-210ENST00000531352 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
ACER3-210ENST00000531352 ABCC2Q92887 1545 aa19■□□□□ 0.63
ACER3-210ENST00000531352 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
ACER3-210ENST00000531352 ABCA8O94911 1581 aa18.98■□□□□ 0.63
ACER3-210ENST00000531352 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
ACER3-210ENST00000531352 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
ACER3-210ENST00000531352 KDM5BQ9UGL1 1544 aa18.93■□□□□ 0.62
ACER3-210ENST00000531352 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
ACER3-210ENST00000531352 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
ACER3-210ENST00000531352 ZCCHC11Q5TAX3 1644 aaKnown RBP18.91■□□□□ 0.62
ACER3-210ENST00000531352 CLIP1P30622 1438 aa18.9■□□□□ 0.62
ACER3-210ENST00000531352 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.62
ACER3-210ENST00000531352 ASXL2Q76L83 1435 aa18.87■□□□□ 0.61
ACER3-210ENST00000531352 KIF13AQ9H1H9 1805 aa18.87■□□□□ 0.61
ACER3-210ENST00000531352 NUP153P49790 1475 aaKnown RBP18.86■□□□□ 0.61
ACER3-210ENST00000531352 ATP10BO94823 1461 aa18.86■□□□□ 0.61
ACER3-210ENST00000531352 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
ACER3-210ENST00000531352 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
ACER3-210ENST00000531352 FMN1Q68DA7 1419 aa18.82■□□□□ 0.6
ACER3-210ENST00000531352 FAM69CQ0P6D2 419 aa18.82■□□□□ 0.6
ACER3-210ENST00000531352 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
ACER3-210ENST00000531352 ATP1B4Q9UN42 357 aaPredicted RBP18.79■□□□□ 0.6
ACER3-210ENST00000531352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
ACER3-210ENST00000531352 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
ACER3-210ENST00000531352 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.6
ACER3-210ENST00000531352 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
ACER3-210ENST00000531352 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
ACER3-210ENST00000531352 LRRIQ1Q96JM4 1722 aa18.75■□□□□ 0.59
ACER3-210ENST00000531352 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
ACER3-210ENST00000531352 PCF11O94913 1555 aaKnown RBP18.74■□□□□ 0.59
ACER3-210ENST00000531352 HECW1Q76N89 1606 aa18.73■□□□□ 0.59
ACER3-210ENST00000531352 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
ACER3-210ENST00000531352 TSPOAP1O95153 1857 aa18.72■□□□□ 0.59
ACER3-210ENST00000531352 GLI2P10070 1586 aa18.7■□□□□ 0.58
ACER3-210ENST00000531352 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
ACER3-210ENST00000531352 FYCO1Q9BQS8 1478 aa18.66■□□□□ 0.58
ACER3-210ENST00000531352 MAP3K4Q9Y6R4 1608 aa18.65■□□□□ 0.58
ACER3-210ENST00000531352 PPRC1Q5VV67 1664 aaKnown RBP18.65■□□□□ 0.58
ACER3-210ENST00000531352 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
ACER3-210ENST00000531352 VPS8Q8N3P4 1428 aa18.59■□□□□ 0.57
ACER3-210ENST00000531352 CFAP43Q8NDM7 1665 aa18.59■□□□□ 0.57
ACER3-210ENST00000531352 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
ACER3-210ENST00000531352 CCDC18Q5T9S5 1454 aa18.59■□□□□ 0.57
ACER3-210ENST00000531352 ABCA9Q8IUA7 1624 aa18.59■□□□□ 0.57
ACER3-210ENST00000531352 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.57
ACER3-210ENST00000531352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.56
ACER3-210ENST00000531352 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
ACER3-210ENST00000531352 KIF14Q15058 1648 aa18.55■□□□□ 0.56
ACER3-210ENST00000531352 TTC37Q6PGP7 1564 aa18.54■□□□□ 0.56
ACER3-210ENST00000531352 COL17A1Q9UMD9 1497 aaPredicted RBP18.51■□□□□ 0.55
ACER3-210ENST00000531352 TEX14Q8IWB6 1497 aa18.49■□□□□ 0.55
ACER3-210ENST00000531352 KDM6BO15054 1643 aa18.46■□□□□ 0.55
ACER3-210ENST00000531352 TIAM1Q13009 1591 aa18.46■□□□□ 0.55
ACER3-210ENST00000531352 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
ACER3-210ENST00000531352 PLCH2O75038 1416 aa18.44■□□□□ 0.54
ACER3-210ENST00000531352 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
ACER3-210ENST00000531352 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
ACER3-210ENST00000531352 FANCAO15360 1455 aa18.41■□□□□ 0.54
ACER3-210ENST00000531352 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
ACER3-210ENST00000531352 NEO1Q92859 1461 aa18.4■□□□□ 0.54
ACER3-210ENST00000531352 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
ACER3-210ENST00000531352 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.54
ACER3-210ENST00000531352 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
ACER3-210ENST00000531352 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
ACER3-210ENST00000531352 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
ACER3-210ENST00000531352 ARAP3Q8WWN8 1544 aa18.38■□□□□ 0.53
ACER3-210ENST00000531352 RAPGEF3O95398 923 aa18.37■□□□□ 0.53
ACER3-210ENST00000531352 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
ACER3-210ENST00000531352 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms