RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
ACER3-210ENST00000531352 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
ACER3-210ENST00000531352 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
ACER3-210ENST00000531352 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
ACER3-210ENST00000531352 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
ACER3-210ENST00000531352 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
ACER3-210ENST00000531352 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
ACER3-210ENST00000531352 MT1LQ93083 61 aa4.17□□□□□ -1.74
ACER3-210ENST00000531352 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
ACER3-210ENST00000531352 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
ACER3-210ENST00000531352 MT1GP13640 62 aa4.15□□□□□ -1.75
ACER3-210ENST00000531352 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
ACER3-210ENST00000531352 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
ACER3-210ENST00000531352 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
ACER3-210ENST00000531352 ROMO1P60602 79 aa4.11□□□□□ -1.75
ACER3-210ENST00000531352 MT1MQ8N339 61 aa4.1□□□□□ -1.75
ACER3-210ENST00000531352 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
ACER3-210ENST00000531352 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
ACER3-210ENST00000531352 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
ACER3-210ENST00000531352 KRTAP23-1A1A580 65 aa4.02□□□□□ -1.77
ACER3-210ENST00000531352 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
ACER3-210ENST00000531352 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
ACER3-210ENST00000531352 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
ACER3-210ENST00000531352 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
ACER3-210ENST00000531352 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
ACER3-210ENST00000531352 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
ACER3-210ENST00000531352 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
ACER3-210ENST00000531352 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
ACER3-210ENST00000531352 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
ACER3-210ENST00000531352 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
ACER3-210ENST00000531352 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
ACER3-210ENST00000531352 MT4P47944 62 aa3.78□□□□□ -1.8
ACER3-210ENST00000531352 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
ACER3-210ENST00000531352 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
ACER3-210ENST00000531352 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
ACER3-210ENST00000531352 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
ACER3-210ENST00000531352 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
ACER3-210ENST00000531352 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
ACER3-210ENST00000531352 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
ACER3-210ENST00000531352 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
ACER3-210ENST00000531352 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
ACER3-210ENST00000531352 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
ACER3-210ENST00000531352 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
ACER3-210ENST00000531352 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
ACER3-210ENST00000531352 MT1AP04731 61 aa3.53□□□□□ -1.84
ACER3-210ENST00000531352 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
ACER3-210ENST00000531352 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
ACER3-210ENST00000531352 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
ACER3-210ENST00000531352 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
ACER3-210ENST00000531352 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
ACER3-210ENST00000531352 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
ACER3-210ENST00000531352 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
ACER3-210ENST00000531352 MT3P25713 68 aa3.2□□□□□ -1.9
ACER3-210ENST00000531352 H3BS24 57 aa3.13□□□□□ -1.91
ACER3-210ENST00000531352 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
ACER3-210ENST00000531352 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
ACER3-210ENST00000531352 MUC5ACP98088 5654 aa2.96□□□□□ -1.93
ACER3-210ENST00000531352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
ACER3-210ENST00000531352 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
ACER3-210ENST00000531352 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
ACER3-210ENST00000531352 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
ACER3-210ENST00000531352 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
ACER3-210ENST00000531352 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
ACER3-210ENST00000531352 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
ACER3-210ENST00000531352 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
ACER3-210ENST00000531352 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
ACER3-210ENST00000531352 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
ACER3-210ENST00000531352 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
ACER3-210ENST00000531352 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
ACER3-210ENST00000531352 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
ACER3-210ENST00000531352 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
ACER3-210ENST00000531352 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
ACER3-210ENST00000531352 PRM1P04553 51 aa2.17□□□□□ -2.06
ACER3-210ENST00000531352 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
ACER3-210ENST00000531352 INE1O15225 51 aa2.04□□□□□ -2.08
ACER3-210ENST00000531352 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
ACER3-210ENST00000531352 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
ACER3-210ENST00000531352 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms