RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.59□□□□□ -0.392e-29■■■■■ 310.5
ACER3-210ENST00000531352 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■■ 110.9
ACER3-210ENST00000531352 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.49□□□□□ -0.416e-28■■■■■ 106.4
ACER3-210ENST00000531352 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.463e-17■■■■■ 71.6
ACER3-210ENST00000531352 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.077e-25■■■■■ 56.8
ACER3-210ENST00000531352 EFTUD2Q15029 972 aaKnown RBP eCLIP11.42□□□□□ -0.584e-8■■■■■ 42.6
ACER3-210ENST00000531352 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.372e-7■■■■■ 40.8
ACER3-210ENST00000531352 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.822e-12■■■■■ 32.2
ACER3-210ENST00000531352 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.741e-6■■■■■ 28.9
ACER3-210ENST00000531352 SF3B4Q15427 424 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■■■ 28.8
ACER3-210ENST00000531352 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■■■ 27.5
ACER3-210ENST00000531352 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.39□□□□□ -0.911e-7■■■■■ 26.9
ACER3-210ENST00000531352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.89□□□□□ -0.193e-9■■■■□ 23.2
ACER3-210ENST00000531352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.456e-7■■■□□ 19.2
ACER3-210ENST00000531352 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.428e-6■■■□□ 18.5
ACER3-210ENST00000531352 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■■□□ 15.4
ACER3-210ENST00000531352 TROVE2P10155 538 aaKnown RBP eCLIP10.71□□□□□ -0.691e-6■□□□□ 8.4
Retrieved 17 of 17 RNA–protein pairs in 6.3 ms